RNA–Protein interactions for RNA: ENST00000410080.5

PRPF40A-202, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRPF40A, Length 8,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-202ENST00000410080 HDAC3O15379 428 aa10.95□□□□□ -0.66
PRPF40A-202ENST00000410080 GBAP04062 536 aa10.95□□□□□ -0.66
PRPF40A-202ENST00000410080 CSF2P04141 144 aa10.95□□□□□ -0.66
PRPF40A-202ENST00000410080 TM4SF1P30408 202 aa10.95□□□□□ -0.66
PRPF40A-202ENST00000410080 MAGEA11P43364 429 aa10.95□□□□□ -0.66
PRPF40A-202ENST00000410080 TTMPQ5BVD1 217 aa10.95□□□□□ -0.66
PRPF40A-202ENST00000410080 CARD16Q5EG05 197 aa10.95□□□□□ -0.66
PRPF40A-202ENST00000410080 PPM1JQ5JR12 505 aa10.95□□□□□ -0.66
PRPF40A-202ENST00000410080 PRAMEF14Q5SWL7 426 aa10.95□□□□□ -0.66
PRPF40A-202ENST00000410080 PRAMEF13Q5VWM6 474 aa10.95□□□□□ -0.66
PRPF40A-202ENST00000410080 SLC2A7Q6PXP3 512 aa10.95□□□□□ -0.66
PRPF40A-202ENST00000410080 SLC26A9Q7LBE3 791 aa10.95□□□□□ -0.66
PRPF40A-202ENST00000410080 XYLT1Q86Y38 959 aa10.95□□□□□ -0.66
PRPF40A-202ENST00000410080 OR4C15Q8NGM1 316 aa10.95□□□□□ -0.66
PRPF40A-202ENST00000410080 DNAJC19Q96DA6 116 aa10.95□□□□□ -0.66
PRPF40A-202ENST00000410080 ERMAPQ96PL5 475 aaPredicted RBP10.95□□□□□ -0.66
PRPF40A-202ENST00000410080 EPYCQ99645 322 aa10.95□□□□□ -0.66
PRPF40A-202ENST00000410080 DENND2DQ9H6A0 471 aaPredicted RBP10.95□□□□□ -0.66
PRPF40A-202ENST00000410080 ANKRD34BA5PLL1 514 aa10.95□□□□□ -0.66
PRPF40A-202ENST00000410080 ACTL6BO94805 426 aa10.95□□□□□ -0.66
PRPF40A-202ENST00000410080 ALPIP09923 528 aa10.95□□□□□ -0.66
PRPF40A-202ENST00000410080 HLA-EP13747 358 aa10.95□□□□□ -0.66
PRPF40A-202ENST00000410080 RPS15P62841 145 aaKnown RBP10.95□□□□□ -0.66
PRPF40A-202ENST00000410080 KLF1Q13351 362 aaPredicted RBP10.95□□□□□ -0.66
PRPF40A-202ENST00000410080 SLC1A5Q15758 541 aa10.95□□□□□ -0.66
PRPF40A-202ENST00000410080 ARHGAP22Q7Z5H3 698 aa10.95□□□□□ -0.66
PRPF40A-202ENST00000410080 SCGB1C1Q8TD33 95 aa10.95□□□□□ -0.66
PRPF40A-202ENST00000410080 ACMSDQ8TDX5 336 aa10.95□□□□□ -0.66
PRPF40A-202ENST00000410080 C16orf58Q96GQ5 468 aa10.95□□□□□ -0.66
PRPF40A-202ENST00000410080 ARHGEF17Q96PE2 2063 aaPredicted RBP10.95□□□□□ -0.66
PRPF40A-202ENST00000410080 SLC35F4A4IF30 521 aa10.95□□□□□ -0.66
PRPF40A-202ENST00000410080 DHX15O43143 795 aaKnown RBP10.95□□□□□ -0.66
PRPF40A-202ENST00000410080 VSX2P58304 361 aaPredicted RBP10.95□□□□□ -0.66
PRPF40A-202ENST00000410080 DEFA5Q01523 94 aa10.95□□□□□ -0.66
PRPF40A-202ENST00000410080 CLCQ05315 142 aa10.95□□□□□ -0.66
PRPF40A-202ENST00000410080 TIGD6Q17RP2 521 aa10.95□□□□□ -0.66
PRPF40A-202ENST00000410080 PYROXD2Q8N2H3 581 aa10.95□□□□□ -0.66
PRPF40A-202ENST00000410080 SFRP1Q8N474 314 aa10.95□□□□□ -0.66
PRPF40A-202ENST00000410080 GATSQ8NAP1 163 aa10.95□□□□□ -0.66
PRPF40A-202ENST00000410080 KLHDC7BQ96G42 594 aa10.95□□□□□ -0.66
PRPF40A-202ENST00000410080 PKP4Q99569 1192 aa10.95□□□□□ -0.66
PRPF40A-202ENST00000410080 ZNF282Q9UDV7 671 aaPredicted RBP10.95□□□□□ -0.66
PRPF40A-202ENST00000410080 KCNN3Q9UGI6 736 aa10.95□□□□□ -0.66
PRPF40A-202ENST00000410080 KCNIP3Q9Y2W7 256 aa10.95□□□□□ -0.66
PRPF40A-202ENST00000410080 GLTPD2A6NH11 291 aa10.95□□□□□ -0.66
PRPF40A-202ENST00000410080 FBLP22087 321 aaKnown RBP10.95□□□□□ -0.66
PRPF40A-202ENST00000410080 OGFOD2Q6N063 350 aa10.95□□□□□ -0.66
PRPF40A-202ENST00000410080 COMTD1Q86VU5 262 aa10.95□□□□□ -0.66
PRPF40A-202ENST00000410080 PHF13Q86YI8 300 aaPredicted RBP10.95□□□□□ -0.66
PRPF40A-202ENST00000410080 SCAMP5Q8TAC9 235 aa10.95□□□□□ -0.66
PRPF40A-202ENST00000410080 SPRYD4Q8WW59 207 aaPredicted RBP10.95□□□□□ -0.66
PRPF40A-202ENST00000410080 PYCR2Q96C36 320 aa10.95□□□□□ -0.66
PRPF40A-202ENST00000410080 PNPLA3Q9NST1 481 aa10.95□□□□□ -0.66
PRPF40A-202ENST00000410080 COMMD3Q9UBI1 195 aa10.95□□□□□ -0.66
PRPF40A-202ENST00000410080 CFL2Q9Y281 166 aa10.95□□□□□ -0.66
PRPF40A-202ENST00000410080 TELO2Q9Y4R8 837 aa10.95□□□□□ -0.66
PRPF40A-202ENST00000410080 WNT6Q9Y6F9 365 aa10.95□□□□□ -0.66
PRPF40A-202ENST00000410080 COMMD3-BMI1R4GMX3 469 aa10.95□□□□□ -0.66
PRPF40A-202ENST00000410080 SMIM28A0A1B0GU29 152 aa10.95□□□□□ -0.66
PRPF40A-202ENST00000410080 KANTRA0A1W2PQU2 76 aa10.95□□□□□ -0.66
PRPF40A-202ENST00000410080 GLOD5A6NK44 160 aa10.95□□□□□ -0.66
PRPF40A-202ENST00000410080 ADAMDEC1O15204 470 aa10.95□□□□□ -0.66
PRPF40A-202ENST00000410080 MPZL2O60487 215 aa10.95□□□□□ -0.66
PRPF40A-202ENST00000410080 ZBTB48P10074 688 aaPredicted RBP10.95□□□□□ -0.66
PRPF40A-202ENST00000410080 AUHQ13825 339 aaKnown RBP10.95□□□□□ -0.66
PRPF40A-202ENST00000410080 SCARB2Q14108 478 aa10.95□□□□□ -0.66
PRPF40A-202ENST00000410080 CNKSR3Q6P9H4 555 aa10.95□□□□□ -0.66
PRPF40A-202ENST00000410080 KCTD9Q7L273 389 aa10.95□□□□□ -0.66
PRPF40A-202ENST00000410080 MREGQ8N565 214 aa10.95□□□□□ -0.66
PRPF40A-202ENST00000410080 IL21RQ9HBE5 538 aa10.95□□□□□ -0.66
PRPF40A-202ENST00000410080 ATXN10Q9UBB4 475 aa10.95□□□□□ -0.66
PRPF40A-202ENST00000410080 RHOQP17081 205 aa10.95□□□□□ -0.66
PRPF40A-202ENST00000410080 CD53P19397 219 aa10.95□□□□□ -0.66
PRPF40A-202ENST00000410080 CRB2Q5IJ48 1285 aa10.95□□□□□ -0.66
PRPF40A-202ENST00000410080 LRRC66Q68CR7 880 aa10.95□□□□□ -0.66
PRPF40A-202ENST00000410080 PRR18Q8N4B5 295 aa10.95□□□□□ -0.66
PRPF40A-202ENST00000410080 HM13Q8TCT9 377 aa10.95□□□□□ -0.66
PRPF40A-202ENST00000410080 STK32AQ8WU08 396 aa10.95□□□□□ -0.66
PRPF40A-202ENST00000410080 ACDQ96AP0 544 aa10.95□□□□□ -0.66
PRPF40A-202ENST00000410080 CSPG4P5Q96PW8 444 aa10.95□□□□□ -0.66
PRPF40A-202ENST00000410080 MIPEPQ99797 713 aa10.95□□□□□ -0.66
PRPF40A-202ENST00000410080 FEM1AQ9BSK4 669 aa10.95□□□□□ -0.66
PRPF40A-202ENST00000410080 SYT17Q9BSW7 474 aa10.95□□□□□ -0.66
PRPF40A-202ENST00000410080 TAC3Q9UHF0 121 aa10.95□□□□□ -0.66
PRPF40A-202ENST00000410080 FKBPLQ9UIM3 349 aa10.95□□□□□ -0.66
PRPF40A-202ENST00000410080 GPR34Q9UPC5 381 aa10.95□□□□□ -0.66
PRPF40A-202ENST00000410080 YARS2Q9Y2Z4 477 aaKnown RBP10.95□□□□□ -0.66
PRPF40A-202ENST00000410080 PCDHGB1Q9Y5G3 927 aa10.95□□□□□ -0.66
PRPF40A-202ENST00000410080 NCANO14594 1321 aa10.94□□□□□ -0.66
PRPF40A-202ENST00000410080 PPP1R11O60927 126 aaPredicted RBP10.94□□□□□ -0.66
PRPF40A-202ENST00000410080 CST3P01034 146 aaPredicted RBP10.94□□□□□ -0.66
PRPF40A-202ENST00000410080 EXOC3L2Q2M3D2 409 aa10.94□□□□□ -0.66
PRPF40A-202ENST00000410080 ARCQ7LC44 396 aa10.94□□□□□ -0.66
PRPF40A-202ENST00000410080 AENQ8WTP8 325 aaKnown RBP10.94□□□□□ -0.66
PRPF40A-202ENST00000410080 ZC3H10Q96K80 434 aaKnown RBP10.94□□□□□ -0.66
PRPF40A-202ENST00000410080 NECAB3Q96P71 396 aaPredicted RBP10.94□□□□□ -0.66
PRPF40A-202ENST00000410080 FGFBP2Q9BYJ0 223 aa10.94□□□□□ -0.66
PRPF40A-202ENST00000410080 ASB6Q9NWX5 421 aa10.94□□□□□ -0.66
PRPF40A-202ENST00000410080 ICKQ9UPZ9 632 aa10.94□□□□□ -0.66
PRPF40A-202ENST00000410080 MAN2B2Q9Y2E5 1009 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms