RNA–Protein interactions for RNA: ENST00000409766.7

USP39-204, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,033 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-204ENST00000409766 HEATR4Q86WZ0 1026 aa19.43■□□□□ 0.7
USP39-204ENST00000409766 SPDYE1Q8NFV5 336 aaPredicted RBP19.43■□□□□ 0.7
USP39-204ENST00000409766 CHTF18Q8WVB6 975 aa19.43■□□□□ 0.7
USP39-204ENST00000409766 NELL1Q92832 810 aa19.43■□□□□ 0.7
USP39-204ENST00000409766 FAM120BQ96EK7 910 aaKnown RBP19.43■□□□□ 0.7
USP39-204ENST00000409766 MYADMQ96S97 322 aa19.43■□□□□ 0.7
USP39-204ENST00000409766 UGT2B28Q9BY64 529 aa19.43■□□□□ 0.7
USP39-204ENST00000409766 LIMD1Q9UGP4 676 aa19.43■□□□□ 0.7
USP39-204ENST00000409766 PRKAB1Q9Y478 270 aa19.43■□□□□ 0.7
USP39-204ENST00000409766 CKAP5Q14008 2032 aa19.43■□□□□ 0.7
USP39-204ENST00000409766 MYOCOSA0A1B0GUC4 107 aa19.42■□□□□ 0.7
USP39-204ENST00000409766 UPK1AO00322 258 aa19.42■□□□□ 0.7
USP39-204ENST00000409766 MID1O15344 667 aa19.42■□□□□ 0.7
USP39-204ENST00000409766 MYO1DO94832 1006 aa19.42■□□□□ 0.7
USP39-204ENST00000409766 CLPTM1O96005 669 aa19.42■□□□□ 0.7
USP39-204ENST00000409766 TFAP2AP05549 437 aa19.42■□□□□ 0.7
USP39-204ENST00000409766 RETP07949 1114 aa19.42■□□□□ 0.7
USP39-204ENST00000409766 DUOXA1Q1HG43 343 aa19.42■□□□□ 0.7
USP39-204ENST00000409766 AGBL4Q5VU57 503 aa19.42■□□□□ 0.7
USP39-204ENST00000409766 ENPP6Q6UWR7 440 aa19.42■□□□□ 0.7
USP39-204ENST00000409766 UNC5DQ6UXZ4 953 aa19.42■□□□□ 0.7
USP39-204ENST00000409766 C1orf52Q8N6N3 182 aaKnown RBP19.42■□□□□ 0.7
USP39-204ENST00000409766 LMNTD1Q8N9Z9 388 aa19.42■□□□□ 0.7
USP39-204ENST00000409766 VPS50Q96JG6 964 aa19.42■□□□□ 0.7
USP39-204ENST00000409766 ADI1Q9BV57 179 aa19.42■□□□□ 0.7
USP39-204ENST00000409766 MRPS26Q9BYN8 205 aaKnown RBP19.42■□□□□ 0.7
USP39-204ENST00000409766 RSPH9Q9H1X1 276 aaPredicted RBP19.42■□□□□ 0.7
USP39-204ENST00000409766 DYRK1BQ9Y463 629 aa19.42■□□□□ 0.7
USP39-204ENST00000409766 NUP214P35658 2090 aaPredicted RBP19.42■□□□□ 0.7
USP39-204ENST00000409766 COX7A2P14406 83 aa19.42■□□□□ 0.7
USP39-204ENST00000409766 WASP42768 502 aa19.42■□□□□ 0.7
USP39-204ENST00000409766 ABHD18Q0P651 414 aa19.42■□□□□ 0.7
USP39-204ENST00000409766 MERTKQ12866 999 aa19.42■□□□□ 0.7
USP39-204ENST00000409766 NKG7Q16617 165 aa19.42■□□□□ 0.7
USP39-204ENST00000409766 WSCD2Q2TBF2 565 aa19.42■□□□□ 0.7
USP39-204ENST00000409766 SPIN4Q56A73 249 aa19.42■□□□□ 0.7
USP39-204ENST00000409766 ANKRD54Q6NXT1 300 aa19.42■□□□□ 0.7
USP39-204ENST00000409766 FBXO30Q8TB52 745 aa19.42■□□□□ 0.7
USP39-204ENST00000409766 REPS1Q96D71 796 aa19.42■□□□□ 0.7
USP39-204ENST00000409766 EFCAB11Q9BUY7 163 aa19.42■□□□□ 0.7
USP39-204ENST00000409766 EHD1Q9H4M9 534 aa19.42■□□□□ 0.7
USP39-204ENST00000409766 DCAF13Q9NV06 445 aaKnown RBP19.42■□□□□ 0.7
USP39-204ENST00000409766 OLAHQ9NV23 265 aa19.42■□□□□ 0.7
USP39-204ENST00000409766 FAM120CQ9NX05 1096 aaKnown RBP19.42■□□□□ 0.7
USP39-204ENST00000409766 ERVK-11Q9UQG0 969 aa19.42■□□□□ 0.7
USP39-204ENST00000409766 RFXAPO00287 272 aa19.41■□□□□ 0.7
USP39-204ENST00000409766 DEAF1O75398 565 aaPredicted RBP19.41■□□□□ 0.7
USP39-204ENST00000409766 CREG1O75629 220 aa19.41■□□□□ 0.7
USP39-204ENST00000409766 APODP05090 189 aa19.41■□□□□ 0.7
USP39-204ENST00000409766 PCCBP05166 539 aa19.41■□□□□ 0.7
USP39-204ENST00000409766 C1GALT1C1LP0DN25 315 aa19.41■□□□□ 0.7
USP39-204ENST00000409766 RPS13P62277 151 aaKnown RBP19.41■□□□□ 0.7
USP39-204ENST00000409766 CDK3Q00526 305 aa19.41■□□□□ 0.7
USP39-204ENST00000409766 RPA4Q13156 261 aa19.41■□□□□ 0.7
USP39-204ENST00000409766 SLC14A1Q13336 389 aa19.41■□□□□ 0.7
USP39-204ENST00000409766 TSTA3Q13630 321 aaPredicted RBP19.41■□□□□ 0.7
USP39-204ENST00000409766 APOFQ13790 326 aa19.41■□□□□ 0.7
USP39-204ENST00000409766 CST6Q15828 149 aa19.41■□□□□ 0.7
USP39-204ENST00000409766 SLC36A3Q495N2 470 aa19.41■□□□□ 0.7
USP39-204ENST00000409766 KRT80Q6KB66 452 aa19.41■□□□□ 0.7
USP39-204ENST00000409766 ZNF551Q7Z340 670 aaPredicted RBP19.41■□□□□ 0.7
USP39-204ENST00000409766 PDZD3Q86UT5 571 aa19.41■□□□□ 0.7
USP39-204ENST00000409766 AMZ2Q86W34 360 aa19.41■□□□□ 0.7
USP39-204ENST00000409766 CACUL1Q86Y37 369 aa19.41■□□□□ 0.7
USP39-204ENST00000409766 LAS2Q8IYD9 372 aa19.41■□□□□ 0.7
USP39-204ENST00000409766 CHPFQ8IZ52 775 aa19.41■□□□□ 0.7
USP39-204ENST00000409766 FGF14Q92915 247 aa19.41■□□□□ 0.7
USP39-204ENST00000409766 FAM162AQ96A26 154 aa19.41■□□□□ 0.7
USP39-204ENST00000409766 REXO5Q96IC2 774 aaKnown RBP19.41■□□□□ 0.7
USP39-204ENST00000409766 PANX1Q96RD7 426 aa19.41■□□□□ 0.7
USP39-204ENST00000409766 LGR4Q9BXB1 951 aa19.41■□□□□ 0.7
USP39-204ENST00000409766 PNPLA3Q9NST1 481 aa19.41■□□□□ 0.7
USP39-204ENST00000409766 SLC23A2Q9UGH3 650 aa19.41■□□□□ 0.7
USP39-204ENST00000409766 PADI4Q9UM07 663 aa19.41■□□□□ 0.7
USP39-204ENST00000409766 MYO9BQ13459 2157 aa19.41■□□□□ 0.7
USP39-204ENST00000409766 FPGTO14772 594 aa19.41■□□□□ 0.7
USP39-204ENST00000409766 SH3BGRLO75368 114 aa19.41■□□□□ 0.7
USP39-204ENST00000409766 GNAO1P09471 354 aa19.41■□□□□ 0.7
USP39-204ENST00000409766 ANXA4P09525 319 aaPredicted RBP19.41■□□□□ 0.7
USP39-204ENST00000409766 ZNF23P17027 643 aa19.41■□□□□ 0.7
USP39-204ENST00000409766 GDI1P31150 447 aa19.41■□□□□ 0.7
USP39-204ENST00000409766 ASMTP46597 345 aa19.41■□□□□ 0.7
USP39-204ENST00000409766 RPL5P46777 297 aaKnown RBP19.41■□□□□ 0.7
USP39-204ENST00000409766 RPS9P46781 194 aaKnown RBP19.41■□□□□ 0.7
USP39-204ENST00000409766 CAMK2GQ13555 558 aaPredicted RBP19.41■□□□□ 0.7
USP39-204ENST00000409766 SLBPQ14493 270 aaKnown RBP eCLIP19.41■□□□□ 0.7
USP39-204ENST00000409766 PON2Q15165 354 aa19.41■□□□□ 0.7
USP39-204ENST00000409766 C10orf62Q5T681 223 aaPredicted RBP19.41■□□□□ 0.7
USP39-204ENST00000409766 DOK6Q6PKX4 331 aa19.41■□□□□ 0.7
USP39-204ENST00000409766 TBPL2Q6SJ96 375 aa19.41■□□□□ 0.7
USP39-204ENST00000409766 PARM1Q6UWI2 310 aa19.41■□□□□ 0.7
USP39-204ENST00000409766 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP19.41■□□□□ 0.7
USP39-204ENST00000409766 SATL1Q86VE3 508 aa19.41■□□□□ 0.7
USP39-204ENST00000409766 STARD8Q92502 1023 aa19.41■□□□□ 0.7
USP39-204ENST00000409766 ELSPBP1Q96BH3 223 aa19.41■□□□□ 0.7
USP39-204ENST00000409766 ASF1AQ9Y294 204 aa19.41■□□□□ 0.7
USP39-204ENST00000409766 BTBD3Q9Y2F9 522 aa19.41■□□□□ 0.7
USP39-204ENST00000409766 DOCK9Q9BZ29 2069 aa19.4■□□□□ 0.7
USP39-204ENST00000409766 FOXE1O00358 373 aaPredicted RBP19.4■□□□□ 0.7
USP39-204ENST00000409766 SCAMP2O15127 329 aaKnown RBP19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms