RNA–Protein interactions for RNA: ENST00000409604.1

SNX13-202, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 4,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-202ENST00000409604 OR2T12Q8NG77 320 aa11.03□□□□□ -0.64
SNX13-202ENST00000409604 C10orf82Q8WW14 230 aa11.03□□□□□ -0.64
SNX13-202ENST00000409604 NELL1Q92832 810 aa11.03□□□□□ -0.64
SNX13-202ENST00000409604 RANBP9Q96S59 729 aa11.03□□□□□ -0.64
SNX13-202ENST00000409604 ACSL5Q9ULC5 683 aa11.03□□□□□ -0.64
SNX13-202ENST00000409604 MRPS33Q9Y291 106 aaKnown RBP11.03□□□□□ -0.64
SNX13-202ENST00000409604 MUC6Q6W4X9 2439 aa11.03□□□□□ -0.64
SNX13-202ENST00000409604 PRSS38A1L453 326 aa11.03□□□□□ -0.64
SNX13-202ENST00000409604 NPHS1O60500 1241 aa11.03□□□□□ -0.64
SNX13-202ENST00000409604 CCNFP41002 786 aa11.03□□□□□ -0.64
SNX13-202ENST00000409604 SIM1P81133 766 aaPredicted RBP11.03□□□□□ -0.64
SNX13-202ENST00000409604 PLEKHS1Q5SXH7 462 aa11.03□□□□□ -0.64
SNX13-202ENST00000409604 IZUMO2Q6UXV1 221 aa11.03□□□□□ -0.64
SNX13-202ENST00000409604 FRMD7Q6ZUT3 714 aa11.03□□□□□ -0.64
SNX13-202ENST00000409604 ADGRG6Q86SQ4 1221 aa11.03□□□□□ -0.64
SNX13-202ENST00000409604 SLC9B2Q86UD5 537 aa11.03□□□□□ -0.64
SNX13-202ENST00000409604 RELL1Q8IUW5 271 aa11.03□□□□□ -0.64
SNX13-202ENST00000409604 RP9Q8TA86 221 aaKnown RBP11.03□□□□□ -0.64
SNX13-202ENST00000409604 MAGEE2Q8TD90 523 aaPredicted RBP11.03□□□□□ -0.64
SNX13-202ENST00000409604 NUDT8Q8WV74 236 aa11.03□□□□□ -0.64
SNX13-202ENST00000409604 NEIL2Q969S2 332 aa11.03□□□□□ -0.64
SNX13-202ENST00000409604 NRTNQ99748 197 aa11.03□□□□□ -0.64
SNX13-202ENST00000409604 C20orf27Q9GZN8 174 aa11.03□□□□□ -0.64
SNX13-202ENST00000409604 CLEC1BQ9P126 229 aa11.03□□□□□ -0.64
SNX13-202ENST00000409604 FETUBQ9UGM5 382 aa11.03□□□□□ -0.64
SNX13-202ENST00000409604 TMCC3Q9ULS5 477 aa11.03□□□□□ -0.64
SNX13-202ENST00000409604 DNAJC15Q9Y5T4 150 aa11.03□□□□□ -0.64
SNX13-202ENST00000409604 PSME4Q14997 1843 aa11.02□□□□□ -0.64
SNX13-202ENST00000409604 RLFQ13129 1914 aa11.02□□□□□ -0.64
SNX13-202ENST00000409604 LOXHD1Q8IVV2 1947 aa11.02□□□□□ -0.64
SNX13-202ENST00000409604 PRAMEF26H0Y7S4 382 aa11.02□□□□□ -0.64
SNX13-202ENST00000409604 SCN2BO60939 215 aa11.02□□□□□ -0.64
SNX13-202ENST00000409604 POU2F1P14859 743 aa11.02□□□□□ -0.64
SNX13-202ENST00000409604 NCBP2P52298 156 aaKnown RBP eCLIP11.02□□□□□ -0.64
SNX13-202ENST00000409604 RPS26P62854 115 aaKnown RBP11.02□□□□□ -0.64
SNX13-202ENST00000409604 KIAA1161Q6NSJ0 714 aa11.02□□□□□ -0.64
SNX13-202ENST00000409604 FAM129BQ96TA1 746 aa11.02□□□□□ -0.64
SNX13-202ENST00000409604 EFCAB11Q9BUY7 163 aa11.02□□□□□ -0.64
SNX13-202ENST00000409604 OR8D2Q9GZM6 311 aa11.02□□□□□ -0.64
SNX13-202ENST00000409604 RPS6KB2Q9UBS0 482 aa11.02□□□□□ -0.64
SNX13-202ENST00000409604 GPN3Q9UHW5 284 aaPredicted RBP11.02□□□□□ -0.64
SNX13-202ENST00000409604 MKL2Q9ULH7 1088 aa11.02□□□□□ -0.64
SNX13-202ENST00000409604 PCDHB11Q9Y5F2 797 aa11.02□□□□□ -0.64
SNX13-202ENST00000409604 BCAT2O15382 392 aaPredicted RBP11.02□□□□□ -0.65
SNX13-202ENST00000409604 CYP4B1P13584 511 aa11.02□□□□□ -0.65
SNX13-202ENST00000409604 HNRNPH1P31943 449 aaKnown RBP11.02□□□□□ -0.65
SNX13-202ENST00000409604 SRSF11Q05519 484 aaKnown RBP11.02□□□□□ -0.65
SNX13-202ENST00000409604 ZNF786Q8N393 782 aa11.02□□□□□ -0.65
SNX13-202ENST00000409604 METTL21AQ8WXB1 218 aa11.02□□□□□ -0.65
SNX13-202ENST00000409604 OR1E3Q8WZA6 343 aa11.02□□□□□ -0.65
SNX13-202ENST00000409604 PROX1Q92786 737 aa11.02□□□□□ -0.65
SNX13-202ENST00000409604 TTYH1Q9H313 450 aaPredicted RBP11.02□□□□□ -0.65
SNX13-202ENST00000409604 FANCEQ9HB96 536 aa11.02□□□□□ -0.65
SNX13-202ENST00000409604 CUEDC1Q9NWM3 386 aaPredicted RBP11.02□□□□□ -0.65
SNX13-202ENST00000409604 STX18Q9P2W9 335 aaKnown RBP11.02□□□□□ -0.65
SNX13-202ENST00000409604 GTF2A1LQ9UNN4 478 aa11.02□□□□□ -0.65
SNX13-202ENST00000409604 TMEM265A0A087WTH1 108 aa11.02□□□□□ -0.65
SNX13-202ENST00000409604 GRXCR2A6NFK2 248 aa11.02□□□□□ -0.65
SNX13-202ENST00000409604 DIRAS1O95057 198 aa11.02□□□□□ -0.65
SNX13-202ENST00000409604 PEX11BO96011 259 aa11.02□□□□□ -0.65
SNX13-202ENST00000409604 CR2P20023 1033 aa11.02□□□□□ -0.65
SNX13-202ENST00000409604 COL9A1P20849 921 aa11.02□□□□□ -0.65
SNX13-202ENST00000409604 SLC6A2P23975 617 aa11.02□□□□□ -0.65
SNX13-202ENST00000409604 IDH2P48735 452 aaKnown RBP11.02□□□□□ -0.65
SNX13-202ENST00000409604 HNMTP50135 292 aa11.02□□□□□ -0.65
SNX13-202ENST00000409604 PRSS36Q5K4E3 855 aa11.02□□□□□ -0.65
SNX13-202ENST00000409604 FAM47BQ8NA70 645 aa11.02□□□□□ -0.65
SNX13-202ENST00000409604 HUS1BQ8NHY5 278 aa11.02□□□□□ -0.65
SNX13-202ENST00000409604 CAMK1GQ96NX5 476 aa11.02□□□□□ -0.65
SNX13-202ENST00000409604 INSM2Q96T92 566 aaPredicted RBP11.02□□□□□ -0.65
SNX13-202ENST00000409604 DUSP26Q9BV47 211 aa11.02□□□□□ -0.65
SNX13-202ENST00000409604 IMPAD1Q9NX62 359 aa11.02□□□□□ -0.65
SNX13-202ENST00000409604 KLHL28Q9NXS3 571 aa11.02□□□□□ -0.65
SNX13-202ENST00000409604 KLF15Q9UIH9 416 aa11.02□□□□□ -0.65
SNX13-202ENST00000409604 MROH6A6NGR9 719 aa11.01□□□□□ -0.65
SNX13-202ENST00000409604 G3V2L1 256 aa11.01□□□□□ -0.65
SNX13-202ENST00000409604 ALBP02768 609 aa11.01□□□□□ -0.65
SNX13-202ENST00000409604 JMJD7P0C870 316 aa11.01□□□□□ -0.65
SNX13-202ENST00000409604 LIPEQ05469 1076 aa11.01□□□□□ -0.65
SNX13-202ENST00000409604 ZNF155Q12901 538 aaPredicted RBP11.01□□□□□ -0.65
SNX13-202ENST00000409604 ERV3-1Q14264 604 aa11.01□□□□□ -0.65
SNX13-202ENST00000409604 HEPACAMQ14CZ8 416 aa11.01□□□□□ -0.65
SNX13-202ENST00000409604 C6orf136Q5SQH8 315 aa11.01□□□□□ -0.65
SNX13-202ENST00000409604 ARHGAP40Q5TG30 622 aa11.01□□□□□ -0.65
SNX13-202ENST00000409604 TIFABQ6ZNK6 161 aa11.01□□□□□ -0.65
SNX13-202ENST00000409604 TREML1Q86YW5 311 aa11.01□□□□□ -0.65
SNX13-202ENST00000409604 OR7A2PQ8NGA2 310 aa11.01□□□□□ -0.65
SNX13-202ENST00000409604 DNASE1L2Q92874 299 aa11.01□□□□□ -0.65
SNX13-202ENST00000409604 ITCHQ96J02 903 aa11.01□□□□□ -0.65
SNX13-202ENST00000409604 EGLN2Q96KS0 407 aa11.01□□□□□ -0.65
SNX13-202ENST00000409604 NUSAP1Q9BXS6 441 aaKnown RBP11.01□□□□□ -0.65
SNX13-202ENST00000409604 YY1AP1Q9H869 796 aa11.01□□□□□ -0.65
SNX13-202ENST00000409604 ADGRE2Q9UHX3 823 aa11.01□□□□□ -0.65
SNX13-202ENST00000409604 SLC9A8Q9Y2E8 581 aa11.01□□□□□ -0.65
SNX13-202ENST00000409604 hCG_2039718K7EN88 272 aa11.01□□□□□ -0.65
SNX13-202ENST00000409604 GSC2O15499 205 aa11.01□□□□□ -0.65
SNX13-202ENST00000409604 NME6O75414 186 aaPredicted RBP11.01□□□□□ -0.65
SNX13-202ENST00000409604 IL6P05231 212 aa11.01□□□□□ -0.65
SNX13-202ENST00000409604 STXBP1P61764 594 aaKnown RBP11.01□□□□□ -0.65
SNX13-202ENST00000409604 OC90Q02509 493 aaPredicted RBP11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms