RNA–Protein interactions for RNA: ENST00000402468.3

C1GALT1-202, Transcript of core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene C1GALT1, Length 930 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1GALT1-202ENST00000402468 SUSD6Q92537 303 aa3.66□□□□□ -1.82
C1GALT1-202ENST00000402468 SGF29Q96ES7 293 aa3.66□□□□□ -1.82
C1GALT1-202ENST00000402468 ALG14Q96F25 216 aa3.66□□□□□ -1.82
C1GALT1-202ENST00000402468 GDAP1L1Q96MZ0 367 aa3.66□□□□□ -1.82
C1GALT1-202ENST00000402468 BTBD9Q96Q07 612 aa3.66□□□□□ -1.82
C1GALT1-202ENST00000402468 ATG101Q9BSB4 218 aa3.66□□□□□ -1.82
C1GALT1-202ENST00000402468 OR2B2Q9GZK3 357 aa3.66□□□□□ -1.82
C1GALT1-202ENST00000402468 OR6C2Q9NZP2 312 aa3.66□□□□□ -1.82
C1GALT1-202ENST00000402468 PA2G4Q9UQ80 394 aaKnown RBP3.66□□□□□ -1.82
C1GALT1-202ENST00000402468 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.65□□□□□ -1.83
C1GALT1-202ENST00000402468 FAM149AA5PLN7 773 aa3.65□□□□□ -1.83
C1GALT1-202ENST00000402468 C17orf105B2RV13 164 aa3.65□□□□□ -1.83
C1GALT1-202ENST00000402468 NPIPA3F8WFD2 350 aa3.65□□□□□ -1.83
C1GALT1-202ENST00000402468 DDX39AO00148 427 aaKnown RBP3.65□□□□□ -1.83
C1GALT1-202ENST00000402468 BMPR1BO00238 502 aa3.65□□□□□ -1.83
C1GALT1-202ENST00000402468 CTDSPLO15194 276 aa3.65□□□□□ -1.83
C1GALT1-202ENST00000402468 RTN2O75298 545 aa3.65□□□□□ -1.83
C1GALT1-202ENST00000402468 GLRA3O75311 464 aa3.65□□□□□ -1.83
C1GALT1-202ENST00000402468 PNPP00491 289 aa3.65□□□□□ -1.83
C1GALT1-202ENST00000402468 TSHBP01222 138 aa3.65□□□□□ -1.83
C1GALT1-202ENST00000402468 PRKAR1AP10644 381 aa3.65□□□□□ -1.83
C1GALT1-202ENST00000402468 GP1BBP13224 206 aa3.65□□□□□ -1.83
C1GALT1-202ENST00000402468 HLA-DPA1P20036 260 aa3.65□□□□□ -1.83
C1GALT1-202ENST00000402468 NR1D1P20393 614 aa3.65□□□□□ -1.83
C1GALT1-202ENST00000402468 CYP2A7P20853 494 aa3.65□□□□□ -1.83
C1GALT1-202ENST00000402468 LHCGRP22888 699 aa3.65□□□□□ -1.83
C1GALT1-202ENST00000402468 CTNNB1P35222 781 aa3.65□□□□□ -1.83
C1GALT1-202ENST00000402468 KCNJ1P48048 391 aa3.65□□□□□ -1.83
C1GALT1-202ENST00000402468 KHKP50053 298 aa3.65□□□□□ -1.83
C1GALT1-202ENST00000402468 AKAP17AQ02040 695 aaKnown RBP3.65□□□□□ -1.83
C1GALT1-202ENST00000402468 ARL16Q0P5N6 197 aa3.65□□□□□ -1.83
C1GALT1-202ENST00000402468 CETN1Q12798 172 aa3.65□□□□□ -1.83
C1GALT1-202ENST00000402468 CCDC6Q16204 474 aa3.65□□□□□ -1.83
C1GALT1-202ENST00000402468 FGD3Q5JSP0 725 aa3.65□□□□□ -1.83
C1GALT1-202ENST00000402468 SLC10A5Q5PT55 438 aa3.65□□□□□ -1.83
C1GALT1-202ENST00000402468 ARHGEF16Q5VV41 709 aa3.65□□□□□ -1.83
C1GALT1-202ENST00000402468 CEACAM20Q6UY09 585 aa3.65□□□□□ -1.83
C1GALT1-202ENST00000402468 GPR141Q7Z602 305 aa3.65□□□□□ -1.83
C1GALT1-202ENST00000402468 TRPT1Q86TN4 253 aaKnown RBP3.65□□□□□ -1.83
C1GALT1-202ENST00000402468 CREBRFQ8IUR6 639 aa3.65□□□□□ -1.83
C1GALT1-202ENST00000402468 CROCCP3Q8IVE0 287 aa3.65□□□□□ -1.83
C1GALT1-202ENST00000402468 MARVELD2Q8N4S9 558 aa3.65□□□□□ -1.83
C1GALT1-202ENST00000402468 GPATCH11Q8N954 259 aa3.65□□□□□ -1.83
C1GALT1-202ENST00000402468 KLHDC9Q8NEP7 349 aa3.65□□□□□ -1.83
C1GALT1-202ENST00000402468 DBF4BQ8NFT6 615 aa3.65□□□□□ -1.83
C1GALT1-202ENST00000402468 GIMAP5Q96F15 307 aa3.65□□□□□ -1.83
C1GALT1-202ENST00000402468 C17orf62Q9BQA9 187 aa3.65□□□□□ -1.83
C1GALT1-202ENST00000402468 MMP28Q9H239 520 aa3.65□□□□□ -1.83
C1GALT1-202ENST00000402468 RIMS4Q9H426 269 aaPredicted RBP3.65□□□□□ -1.83
C1GALT1-202ENST00000402468 AKIRIN1Q9H9L7 192 aaPredicted RBP3.65□□□□□ -1.83
C1GALT1-202ENST00000402468 IARS2Q9NSE4 1012 aaKnown RBP3.65□□□□□ -1.83
C1GALT1-202ENST00000402468 CWC25Q9NXE8 425 aaPredicted RBP3.65□□□□□ -1.83
C1GALT1-202ENST00000402468 KCNG2Q9UJ96 466 aa3.65□□□□□ -1.83
C1GALT1-202ENST00000402468 ICAM5Q9UMF0 924 aa3.65□□□□□ -1.83
C1GALT1-202ENST00000402468 R4GN57 208 aa3.65□□□□□ -1.83
C1GALT1-202ENST00000402468 TRAV18A0A075B6X5 111 aa3.64□□□□□ -1.83
C1GALT1-202ENST00000402468 A0A0B4J203 849 aa3.64□□□□□ -1.83
C1GALT1-202ENST00000402468 SMIM1B2RUZ4 78 aa3.64□□□□□ -1.83
C1GALT1-202ENST00000402468 PCDH7O60245 1069 aa3.64□□□□□ -1.83
C1GALT1-202ENST00000402468 LMX1BO60663 402 aa3.64□□□□□ -1.83
C1GALT1-202ENST00000402468 CDK2AP2O75956 126 aa3.64□□□□□ -1.83
C1GALT1-202ENST00000402468 KRT33AO76009 404 aa3.64□□□□□ -1.83
C1GALT1-202ENST00000402468 SLC16A8O95907 504 aa3.64□□□□□ -1.83
C1GALT1-202ENST00000402468 CLPTM1O96005 669 aa3.64□□□□□ -1.83
C1GALT1-202ENST00000402468 DARSP14868 501 aaKnown RBP3.64□□□□□ -1.83
C1GALT1-202ENST00000402468 SSTR1P30872 391 aa3.64□□□□□ -1.83
C1GALT1-202ENST00000402468 ATP6V1E1P36543 226 aa3.64□□□□□ -1.83
C1GALT1-202ENST00000402468 CASP3P42574 277 aa3.64□□□□□ -1.83
C1GALT1-202ENST00000402468 OR3A3P47888 321 aa3.64□□□□□ -1.83
C1GALT1-202ENST00000402468 ARHGAP1Q07960 439 aa3.64□□□□□ -1.83
C1GALT1-202ENST00000402468 SGCGQ13326 291 aa3.64□□□□□ -1.83
C1GALT1-202ENST00000402468 HERC3Q15034 1050 aa3.64□□□□□ -1.83
C1GALT1-202ENST00000402468 RBBP5Q15291 538 aaKnown RBP3.64□□□□□ -1.83
C1GALT1-202ENST00000402468 CDC37Q16543 378 aaPredicted RBP3.64□□□□□ -1.83
C1GALT1-202ENST00000402468 STPG1Q5TH74 334 aa3.64□□□□□ -1.83
C1GALT1-202ENST00000402468 FAM166AQ6J272 317 aa3.64□□□□□ -1.83
C1GALT1-202ENST00000402468 BTNL8Q6UX41 500 aa3.64□□□□□ -1.83
C1GALT1-202ENST00000402468 SH2D5Q6ZV89 423 aa3.64□□□□□ -1.83
C1GALT1-202ENST00000402468 KCTD9Q7L273 389 aa3.64□□□□□ -1.83
C1GALT1-202ENST00000402468 CCDC60Q8IWA6 550 aaPredicted RBP3.64□□□□□ -1.83
C1GALT1-202ENST00000402468 KIAA0895Q8NCT3 520 aa3.64□□□□□ -1.83
C1GALT1-202ENST00000402468 OR10V1Q8NGI7 309 aa3.64□□□□□ -1.83
C1GALT1-202ENST00000402468 LRRC8CQ8TDW0 803 aa3.64□□□□□ -1.83
C1GALT1-202ENST00000402468 ATP6V0A1Q93050 837 aa3.64□□□□□ -1.83
C1GALT1-202ENST00000402468 CCDC47Q96A33 483 aaKnown RBP3.64□□□□□ -1.83
C1GALT1-202ENST00000402468 SNRNP40Q96DI7 357 aaKnown RBP3.64□□□□□ -1.83
C1GALT1-202ENST00000402468 CDKN2AIPNLQ96HQ2 116 aa3.64□□□□□ -1.83
C1GALT1-202ENST00000402468 C4orf45Q96LM5 186 aa3.64□□□□□ -1.83
C1GALT1-202ENST00000402468 INPP4AQ96PE3 977 aaPredicted RBP3.64□□□□□ -1.83
C1GALT1-202ENST00000402468 TSSK2Q96PF2 358 aa3.64□□□□□ -1.83
C1GALT1-202ENST00000402468 CDCA3Q99618 268 aaPredicted RBP3.64□□□□□ -1.83
C1GALT1-202ENST00000402468 IDI2Q9BXS1 227 aa3.64□□□□□ -1.83
C1GALT1-202ENST00000402468 UBQLN3Q9H347 655 aa3.64□□□□□ -1.83
C1GALT1-202ENST00000402468 C10orf88Q9H8K7 445 aa3.64□□□□□ -1.83
C1GALT1-202ENST00000402468 DBNDD1Q9H9R9 158 aa3.64□□□□□ -1.83
C1GALT1-202ENST00000402468 RPF1Q9H9Y2 349 aaKnown RBP3.64□□□□□ -1.83
C1GALT1-202ENST00000402468 RNPEPL1Q9HAU8 725 aa3.64□□□□□ -1.83
C1GALT1-202ENST00000402468 CNIH4Q9P003 139 aa3.64□□□□□ -1.83
C1GALT1-202ENST00000402468 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.64□□□□□ -1.83
C1GALT1-202ENST00000402468 IL36AQ9UHA7 158 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms