RNA–Protein interactions for RNA: ENST00000399299.5

SMIM11A-203, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best) BASIC

Gene SMIM11A, Length 1,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-203ENST00000399299 SPENQ96T58 3664 aaKnown RBP14.18□□□□□ -0.14
SMIM11A-203ENST00000399299 IGLV3-12A0A075B6K2 115 aa14.18□□□□□ -0.14
SMIM11A-203ENST00000399299 AGPSO00116 658 aa14.18□□□□□ -0.14
SMIM11A-203ENST00000399299 MED26O95402 600 aa14.18□□□□□ -0.14
SMIM11A-203ENST00000399299 ATXN8OSP0DMR3 200 aa14.18□□□□□ -0.14
SMIM11A-203ENST00000399299 CCND1P24385 295 aa14.18□□□□□ -0.14
SMIM11A-203ENST00000399299 OR1D4P47884 311 aa14.18□□□□□ -0.14
SMIM11A-203ENST00000399299 AP1S2P56377 157 aa14.18□□□□□ -0.14
SMIM11A-203ENST00000399299 FOXL2P58012 376 aa14.18□□□□□ -0.14
SMIM11A-203ENST00000399299 FOXK1P85037 733 aa14.18□□□□□ -0.14
SMIM11A-203ENST00000399299 ILF2Q12905 390 aaKnown RBP14.18□□□□□ -0.14
SMIM11A-203ENST00000399299 FASTKD3Q14CZ7 662 aaKnown RBP14.18□□□□□ -0.14
SMIM11A-203ENST00000399299 PRAMEF13Q5VWM6 474 aa14.18□□□□□ -0.14
SMIM11A-203ENST00000399299 AGTRAPQ6RW13 159 aa14.18□□□□□ -0.14
SMIM11A-203ENST00000399299 SLC26A11Q86WA9 606 aa14.18□□□□□ -0.14
SMIM11A-203ENST00000399299 ARHGEF39Q8N4T4 335 aa14.18□□□□□ -0.14
SMIM11A-203ENST00000399299 CSNK1A1LQ8N752 337 aa14.18□□□□□ -0.14
SMIM11A-203ENST00000399299 GPATCH11Q8N954 259 aa14.18□□□□□ -0.14
SMIM11A-203ENST00000399299 RERGQ96A58 199 aaPredicted RBP14.18□□□□□ -0.14
SMIM11A-203ENST00000399299 PDLIM5Q96HC4 596 aaKnown RBP14.18□□□□□ -0.14
SMIM11A-203ENST00000399299 CABS1Q96KC9 395 aa14.18□□□□□ -0.14
SMIM11A-203ENST00000399299 SYNPO2LQ9H987 977 aa14.18□□□□□ -0.14
SMIM11A-203ENST00000399299 TMEM184CQ9NVA4 438 aa14.18□□□□□ -0.14
SMIM11A-203ENST00000399299 CUEDC1Q9NWM3 386 aaPredicted RBP14.18□□□□□ -0.14
SMIM11A-203ENST00000399299 NSMCE4AQ9NXX6 385 aa14.18□□□□□ -0.14
SMIM11A-203ENST00000399299 C5AR2Q9P296 337 aa14.18□□□□□ -0.14
SMIM11A-203ENST00000399299 CTSFQ9UBX1 484 aa14.18□□□□□ -0.14
SMIM11A-203ENST00000399299 CDC14AQ9UNH5 594 aa14.18□□□□□ -0.14
SMIM11A-203ENST00000399299 RUVBL1Q9Y265 456 aaKnown RBP14.18□□□□□ -0.14
SMIM11A-203ENST00000399299 SNX24Q9Y343 169 aa14.18□□□□□ -0.14
SMIM11A-203ENST00000399299 RP1L1Q8IWN7 2480 aaPredicted RBP14.17□□□□□ -0.14
SMIM11A-203ENST00000399299 KCNE1BA0A087WTH5 132 aa14.17□□□□□ -0.14
SMIM11A-203ENST00000399299 HAT1O14929 419 aa14.17□□□□□ -0.14
SMIM11A-203ENST00000399299 EIF3HO15372 352 aaKnown RBP eCLIP14.17□□□□□ -0.14
SMIM11A-203ENST00000399299 PRPF4O43172 522 aaKnown RBP eCLIP14.17□□□□□ -0.14
SMIM11A-203ENST00000399299 DPM1O60762 260 aa14.17□□□□□ -0.14
SMIM11A-203ENST00000399299 HIST1H2AGP0C0S8 130 aaPredicted RBP14.17□□□□□ -0.14
SMIM11A-203ENST00000399299 HIST1H2ADP20671 130 aa14.17□□□□□ -0.14
SMIM11A-203ENST00000399299 CASQ1P31415 396 aa14.17□□□□□ -0.14
SMIM11A-203ENST00000399299 CALCOCO2Q13137 446 aa14.17□□□□□ -0.14
SMIM11A-203ENST00000399299 MYBPC3Q14896 1274 aa14.17□□□□□ -0.14
SMIM11A-203ENST00000399299 PHKG1Q16816 387 aa14.17□□□□□ -0.14
SMIM11A-203ENST00000399299 VWA5B1Q5TIE3 1220 aa14.17□□□□□ -0.14
SMIM11A-203ENST00000399299 ADCK2Q7Z695 626 aa14.17□□□□□ -0.14
SMIM11A-203ENST00000399299 ZC3HC1Q86WB0 502 aaKnown RBP14.17□□□□□ -0.14
SMIM11A-203ENST00000399299 TMEM151BQ8IW70 566 aa14.17□□□□□ -0.14
SMIM11A-203ENST00000399299 ZBED8Q8IZ13 594 aa14.17□□□□□ -0.14
SMIM11A-203ENST00000399299 GALNT16Q8N428 558 aa14.17□□□□□ -0.14
SMIM11A-203ENST00000399299 DTWD1Q8N5C7 304 aa14.17□□□□□ -0.14
SMIM11A-203ENST00000399299 METTL27Q8N6F8 245 aaPredicted RBP14.17□□□□□ -0.14
SMIM11A-203ENST00000399299 VPS50Q96JG6 964 aa14.17□□□□□ -0.14
SMIM11A-203ENST00000399299 HIST1H2AHQ96KK5 128 aa14.17□□□□□ -0.14
SMIM11A-203ENST00000399299 OLFM1Q99784 485 aa14.17□□□□□ -0.14
SMIM11A-203ENST00000399299 HIST1H2AJQ99878 128 aa14.17□□□□□ -0.14
SMIM11A-203ENST00000399299 H2AFJQ9BTM1 129 aa14.17□□□□□ -0.14
SMIM11A-203ENST00000399299 SGPP1Q9BX95 441 aa14.17□□□□□ -0.14
SMIM11A-203ENST00000399299 PHACTR1Q9C0D0 580 aa14.17□□□□□ -0.14
SMIM11A-203ENST00000399299 SEMA3GQ9NS98 782 aa14.17□□□□□ -0.14
SMIM11A-203ENST00000399299 ABCF3Q9NUQ8 709 aa14.17□□□□□ -0.14
SMIM11A-203ENST00000399299 ZNF282Q9UDV7 671 aaPredicted RBP14.17□□□□□ -0.14
SMIM11A-203ENST00000399299 HS3ST3B1Q9Y662 390 aa14.17□□□□□ -0.14
SMIM11A-203ENST00000399299 MAU2Q9Y6X3 613 aa14.17□□□□□ -0.14
SMIM11A-203ENST00000399299 PTPN13Q12923 2485 aa14.17□□□□□ -0.14
SMIM11A-203ENST00000399299 PABPN1LA6NDY0 278 aaKnown RBP14.16□□□□□ -0.14
SMIM11A-203ENST00000399299 A6NL46 340 aa14.16□□□□□ -0.14
SMIM11A-203ENST00000399299 H7BY64 318 aa14.16□□□□□ -0.14
SMIM11A-203ENST00000399299 SOCS6O14544 535 aa14.16□□□□□ -0.14
SMIM11A-203ENST00000399299 RAD51CO43502 376 aa14.16□□□□□ -0.14
SMIM11A-203ENST00000399299 ZIC2O95409 532 aaPredicted RBP14.16□□□□□ -0.14
SMIM11A-203ENST00000399299 ENO2P09104 434 aaPredicted RBP14.16□□□□□ -0.14
SMIM11A-203ENST00000399299 ZNF37AP17032 561 aaPredicted RBP14.16□□□□□ -0.14
SMIM11A-203ENST00000399299 FBLP22087 321 aaKnown RBP14.16□□□□□ -0.14
SMIM11A-203ENST00000399299 RPS15AP62244 130 aaKnown RBP14.16□□□□□ -0.14
SMIM11A-203ENST00000399299 OCA2Q04671 838 aa14.16□□□□□ -0.14
SMIM11A-203ENST00000399299 AIMP2Q13155 320 aaKnown RBP14.16□□□□□ -0.14
SMIM11A-203ENST00000399299 NAE1Q13564 534 aa14.16□□□□□ -0.14
SMIM11A-203ENST00000399299 DSG2Q14126 1118 aa14.16□□□□□ -0.14
SMIM11A-203ENST00000399299 FAM53BQ14153 422 aa14.16□□□□□ -0.14
SMIM11A-203ENST00000399299 HKDC1Q2TB90 917 aa14.16□□□□□ -0.14
SMIM11A-203ENST00000399299 DUPD1Q68J44 220 aa14.16□□□□□ -0.14
SMIM11A-203ENST00000399299 LCTLQ6UWM7 567 aa14.16□□□□□ -0.14
SMIM11A-203ENST00000399299 MBOAT1Q6ZNC8 495 aa14.16□□□□□ -0.14
SMIM11A-203ENST00000399299 C17orf64Q86WR6 236 aa14.16□□□□□ -0.14
SMIM11A-203ENST00000399299 STT3BQ8TCJ2 826 aa14.16□□□□□ -0.14
SMIM11A-203ENST00000399299 ANKRD7Q92527 254 aa14.16□□□□□ -0.14
SMIM11A-203ENST00000399299 COL26A1Q96A83 441 aa14.16□□□□□ -0.14
SMIM11A-203ENST00000399299 THAP11Q96EK4 314 aa14.16□□□□□ -0.14
SMIM11A-203ENST00000399299 PRAP1Q96NZ9 151 aa14.16□□□□□ -0.14
SMIM11A-203ENST00000399299 TRIM54Q9BYV2 358 aa14.16□□□□□ -0.14
SMIM11A-203ENST00000399299 DRC3Q9H069 523 aa14.16□□□□□ -0.14
SMIM11A-203ENST00000399299 SOX17Q9H6I2 414 aaPredicted RBP14.16□□□□□ -0.14
SMIM11A-203ENST00000399299 ATP13A2Q9NQ11 1180 aa14.16□□□□□ -0.14
SMIM11A-203ENST00000399299 CDC23Q9UJX2 597 aa14.16□□□□□ -0.14
SMIM11A-203ENST00000399299 NOVA2Q9UNW9 492 aaKnown RBP14.16□□□□□ -0.14
SMIM11A-203ENST00000399299 PSAT1Q9Y617 370 aa14.16□□□□□ -0.14
SMIM11A-203ENST00000399299 DOCK10Q96BY6 2186 aa14.16□□□□□ -0.14
SMIM11A-203ENST00000399299 IPO13O94829 963 aaKnown RBP14.15□□□□□ -0.14
SMIM11A-203ENST00000399299 SORBS2O94875 1100 aaKnown RBP14.15□□□□□ -0.14
SMIM11A-203ENST00000399299 ALPPP05187 535 aa14.15□□□□□ -0.14
SMIM11A-203ENST00000399299 ZGLP1P0C6A0 271 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms