RNA–Protein interactions for RNA: ENST00000399084.5

HLA-DQB1-204, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB1, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-204ENST00000399084 ZNF701M0R085 212 aaPredicted RBP17.13■□□□□ 0.33
HLA-DQB1-204ENST00000399084 SCN2BO60939 215 aa17.13■□□□□ 0.33
HLA-DQB1-204ENST00000399084 CST1P01037 141 aa17.13■□□□□ 0.33
HLA-DQB1-204ENST00000399084 COX7A2P14406 83 aa17.13■□□□□ 0.33
HLA-DQB1-204ENST00000399084 HPCAL1P37235 193 aa17.13■□□□□ 0.33
HLA-DQB1-204ENST00000399084 PIK3CBP42338 1070 aa17.13■□□□□ 0.33
HLA-DQB1-204ENST00000399084 PREPP48147 710 aa17.13■□□□□ 0.33
HLA-DQB1-204ENST00000399084 PLIN5Q00G26 463 aa17.13■□□□□ 0.33
HLA-DQB1-204ENST00000399084 LSAMPQ13449 338 aa17.13■□□□□ 0.33
HLA-DQB1-204ENST00000399084 ZNF234Q14588 700 aa17.13■□□□□ 0.33
HLA-DQB1-204ENST00000399084 TCEAL5Q5H9L2 206 aa17.13■□□□□ 0.33
HLA-DQB1-204ENST00000399084 ZNF648Q5T619 568 aaPredicted RBP17.13■□□□□ 0.33
HLA-DQB1-204ENST00000399084 CPZQ66K79 652 aa17.13■□□□□ 0.33
HLA-DQB1-204ENST00000399084 RAET1GQ6H3X3 334 aa17.13■□□□□ 0.33
HLA-DQB1-204ENST00000399084 ADAMTSL4Q6UY14 1074 aa17.13■□□□□ 0.33
HLA-DQB1-204ENST00000399084 HIPK1Q86Z02 1210 aa17.13■□□□□ 0.33
HLA-DQB1-204ENST00000399084 METTL25Q8N6Q8 603 aa17.13■□□□□ 0.33
HLA-DQB1-204ENST00000399084 VN1R2Q8NFZ6 395 aa17.13■□□□□ 0.33
HLA-DQB1-204ENST00000399084 ZNF480Q8WV37 535 aa17.13■□□□□ 0.33
HLA-DQB1-204ENST00000399084 CYGBQ8WWM9 190 aa17.13■□□□□ 0.33
HLA-DQB1-204ENST00000399084 COQ8BQ96D53 544 aa17.13■□□□□ 0.33
HLA-DQB1-204ENST00000399084 HIC2Q96JB3 615 aa17.13■□□□□ 0.33
HLA-DQB1-204ENST00000399084 GRIP2Q9C0E4 1043 aa17.13■□□□□ 0.33
HLA-DQB1-204ENST00000399084 REXO4Q9GZR2 422 aaKnown RBP17.13■□□□□ 0.33
HLA-DQB1-204ENST00000399084 AASDHPPTQ9NRN7 309 aa17.13■□□□□ 0.33
HLA-DQB1-204ENST00000399084 IFT80Q9P2H3 777 aaPredicted RBP17.13■□□□□ 0.33
HLA-DQB1-204ENST00000399084 WBP11Q9Y2W2 641 aaKnown RBP17.13■□□□□ 0.33
HLA-DQB1-204ENST00000399084 HEPACAM2A8MVW5 462 aa17.12■□□□□ 0.33
HLA-DQB1-204ENST00000399084 MAGEB17A8MXT2 336 aa17.12■□□□□ 0.33
HLA-DQB1-204ENST00000399084 CLIC1O00299 241 aa17.12■□□□□ 0.33
HLA-DQB1-204ENST00000399084 FPGTO14772 594 aa17.12■□□□□ 0.33
HLA-DQB1-204ENST00000399084 SCAMP2O15127 329 aaKnown RBP17.12■□□□□ 0.33
HLA-DQB1-204ENST00000399084 VILLO15195 856 aa17.12■□□□□ 0.33
HLA-DQB1-204ENST00000399084 PRKD3O94806 890 aa17.12■□□□□ 0.33
HLA-DQB1-204ENST00000399084 RPN2P04844 631 aa17.12■□□□□ 0.33
HLA-DQB1-204ENST00000399084 C1GALT1C1LP0DN25 315 aa17.12■□□□□ 0.33
HLA-DQB1-204ENST00000399084 THRBP10828 461 aa17.12■□□□□ 0.33
HLA-DQB1-204ENST00000399084 TEAD1P28347 426 aa17.12■□□□□ 0.33
HLA-DQB1-204ENST00000399084 RXRGP48443 463 aa17.12■□□□□ 0.33
HLA-DQB1-204ENST00000399084 ARHGAP19Q14CB8 494 aa17.12■□□□□ 0.33
HLA-DQB1-204ENST00000399084 UGT8Q16880 541 aa17.12■□□□□ 0.33
HLA-DQB1-204ENST00000399084 ZC3H12BQ5HYM0 836 aaKnown RBP17.12■□□□□ 0.33
HLA-DQB1-204ENST00000399084 CCNYL2Q5T2Q4 361 aa17.12■□□□□ 0.33
HLA-DQB1-204ENST00000399084 OR4F3Q6IEY1 312 aa17.12■□□□□ 0.33
HLA-DQB1-204ENST00000399084 RBM44Q6ZP01 1051 aaKnown RBP17.12■□□□□ 0.33
HLA-DQB1-204ENST00000399084 R3HCC1LQ7Z5L2 792 aaKnown RBP17.12■□□□□ 0.33
HLA-DQB1-204ENST00000399084 TRAPPC5Q8IUR0 188 aa17.12■□□□□ 0.33
HLA-DQB1-204ENST00000399084 SYTL1Q8IYJ3 562 aa17.12■□□□□ 0.33
HLA-DQB1-204ENST00000399084 CLEC4FQ8N1N0 589 aa17.12■□□□□ 0.33
HLA-DQB1-204ENST00000399084 PJA1Q8NG27 643 aa17.12■□□□□ 0.33
HLA-DQB1-204ENST00000399084 OR5K1Q8NHB7 308 aa17.12■□□□□ 0.33
HLA-DQB1-204ENST00000399084 CXorf40AQ8TE69 158 aa17.12■□□□□ 0.33
HLA-DQB1-204ENST00000399084 NUDT8Q8WV74 236 aa17.12■□□□□ 0.33
HLA-DQB1-204ENST00000399084 NCLNQ969V3 563 aa17.12■□□□□ 0.33
HLA-DQB1-204ENST00000399084 RAD51AP1Q96B01 352 aa17.12■□□□□ 0.33
HLA-DQB1-204ENST00000399084 MTERF3Q96E29 417 aa17.12■□□□□ 0.33
HLA-DQB1-204ENST00000399084 ATAD3AQ9NVI7 634 aa17.12■□□□□ 0.33
HLA-DQB1-204ENST00000399084 THAP10Q9P2Z0 257 aaPredicted RBP17.12■□□□□ 0.33
HLA-DQB1-204ENST00000399084 GULP1Q9UBP9 304 aa17.12■□□□□ 0.33
HLA-DQB1-204ENST00000399084 PCDHB11Q9Y5F2 797 aa17.12■□□□□ 0.33
HLA-DQB1-204ENST00000399084 GNGT2O14610 69 aa17.11■□□□□ 0.33
HLA-DQB1-204ENST00000399084 DPM1O60762 260 aa17.11■□□□□ 0.33
HLA-DQB1-204ENST00000399084 POP7O75817 140 aaKnown RBP17.11■□□□□ 0.33
HLA-DQB1-204ENST00000399084 ANXA4P09525 319 aaPredicted RBP17.11■□□□□ 0.33
HLA-DQB1-204ENST00000399084 NPPBP16860 134 aa17.11■□□□□ 0.33
HLA-DQB1-204ENST00000399084 PDHA2P29803 388 aa17.11■□□□□ 0.33
HLA-DQB1-204ENST00000399084 MAGEA2P43356 314 aa17.11■□□□□ 0.33
HLA-DQB1-204ENST00000399084 SLC6A11P48066 632 aa17.11■□□□□ 0.33
HLA-DQB1-204ENST00000399084 AGERQ15109 404 aa17.11■□□□□ 0.33
HLA-DQB1-204ENST00000399084 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.11■□□□□ 0.33
HLA-DQB1-204ENST00000399084 CPTPQ5TA50 214 aa17.11■□□□□ 0.33
HLA-DQB1-204ENST00000399084 LPCAT2Q7L5N7 544 aa17.11■□□□□ 0.33
HLA-DQB1-204ENST00000399084 FBXO30Q8TB52 745 aa17.11■□□□□ 0.33
HLA-DQB1-204ENST00000399084 FGF13Q92913 245 aa17.11■□□□□ 0.33
HLA-DQB1-204ENST00000399084 MTERF1Q99551 399 aaKnown RBP17.11■□□□□ 0.33
HLA-DQB1-204ENST00000399084 INPP5KQ9BT40 448 aa17.11■□□□□ 0.33
HLA-DQB1-204ENST00000399084 TBCDQ9BTW9 1192 aa17.11■□□□□ 0.33
HLA-DQB1-204ENST00000399084 DUSP26Q9BV47 211 aa17.11■□□□□ 0.33
HLA-DQB1-204ENST00000399084 OR2AG1Q9H205 316 aa17.11■□□□□ 0.33
HLA-DQB1-204ENST00000399084 ITM2BQ9Y287 266 aa17.11■□□□□ 0.33
HLA-DQB1-204ENST00000399084 DENND4AQ7Z401 1863 aa17.11■□□□□ 0.33
HLA-DQB1-204ENST00000399084 KELP23276 732 aa17.1■□□□□ 0.33
HLA-DQB1-204ENST00000399084 ACADLP28330 430 aa17.1■□□□□ 0.33
HLA-DQB1-204ENST00000399084 TIA1P31483 386 aaKnown RBP eCLIP17.1■□□□□ 0.33
HLA-DQB1-204ENST00000399084 BDKRB1P46663 353 aa17.1■□□□□ 0.33
HLA-DQB1-204ENST00000399084 WNT3P56703 355 aa17.1■□□□□ 0.33
HLA-DQB1-204ENST00000399084 IL18R1Q13478 541 aa17.1■□□□□ 0.33
HLA-DQB1-204ENST00000399084 VMACQ2NL98 169 aa17.1■□□□□ 0.33
HLA-DQB1-204ENST00000399084 POM121L1PQ3SYA9 428 aa17.1■□□□□ 0.33
HLA-DQB1-204ENST00000399084 CWF19L1Q69YN2 538 aaKnown RBP17.1■□□□□ 0.33
HLA-DQB1-204ENST00000399084 DOK6Q6PKX4 331 aa17.1■□□□□ 0.33
HLA-DQB1-204ENST00000399084 TMC5Q6UXY8 1006 aa17.1■□□□□ 0.33
HLA-DQB1-204ENST00000399084 STK32CQ86UX6 486 aa17.1■□□□□ 0.33
HLA-DQB1-204ENST00000399084 ZNF786Q8N393 782 aa17.1■□□□□ 0.33
HLA-DQB1-204ENST00000399084 ZNF366Q8N895 744 aa17.1■□□□□ 0.33
HLA-DQB1-204ENST00000399084 HUS1BQ8NHY5 278 aa17.1■□□□□ 0.33
HLA-DQB1-204ENST00000399084 COX14Q96I36 57 aa17.1■□□□□ 0.33
HLA-DQB1-204ENST00000399084 EGLN2Q96KS0 407 aa17.1■□□□□ 0.33
HLA-DQB1-204ENST00000399084 BHLHE41Q9C0J9 482 aaPredicted RBP17.1■□□□□ 0.33
HLA-DQB1-204ENST00000399084 PITHD1Q9GZP4 211 aaPredicted RBP17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms