RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 PRAMEF4O60810 478 aa22.66■■□□□ 1.22
TSPAN4-203ENST00000397397 MT-CO3P00414 261 aa22.66■■□□□ 1.22
TSPAN4-203ENST00000397397 OTCP00480 354 aa22.66■■□□□ 1.22
TSPAN4-203ENST00000397397 INHBCP55103 352 aa22.66■■□□□ 1.22
TSPAN4-203ENST00000397397 CSNK1G2P78368 415 aa22.66■■□□□ 1.22
TSPAN4-203ENST00000397397 MEF2AQ02078 507 aaPredicted RBP22.66■■□□□ 1.22
TSPAN4-203ENST00000397397 ZFP36L1Q07352 338 aaKnown RBP22.66■■□□□ 1.22
TSPAN4-203ENST00000397397 STX3Q13277 289 aa22.66■■□□□ 1.22
TSPAN4-203ENST00000397397 DOC2AQ14183 400 aa22.66■■□□□ 1.22
TSPAN4-203ENST00000397397 ZIC1Q15915 447 aa22.66■■□□□ 1.22
TSPAN4-203ENST00000397397 PRAMEF9Q5VWM5 478 aa22.66■■□□□ 1.22
TSPAN4-203ENST00000397397 ARHGAP22Q7Z5H3 698 aa22.66■■□□□ 1.22
TSPAN4-203ENST00000397397 MILR1Q7Z6M3 343 aa22.66■■□□□ 1.22
TSPAN4-203ENST00000397397 PAQR7Q86WK9 346 aa22.66■■□□□ 1.22
TSPAN4-203ENST00000397397 RCBTB1Q8NDN9 531 aa22.66■■□□□ 1.22
TSPAN4-203ENST00000397397 KLHL6Q8WZ60 621 aa22.66■■□□□ 1.22
TSPAN4-203ENST00000397397 PTCD3Q96EY7 689 aaKnown RBP22.66■■□□□ 1.22
TSPAN4-203ENST00000397397 CDK15Q96Q40 435 aa22.66■■□□□ 1.22
TSPAN4-203ENST00000397397 NTMT1Q9BV86 223 aa22.66■■□□□ 1.22
TSPAN4-203ENST00000397397 EHD1Q9H4M9 534 aa22.66■■□□□ 1.22
TSPAN4-203ENST00000397397 STK38LQ9Y2H1 464 aa22.66■■□□□ 1.22
TSPAN4-203ENST00000397397 OR2A25A4D2G3 310 aa22.65■■□□□ 1.22
TSPAN4-203ENST00000397397 TMEM114B3SHH9 223 aa22.65■■□□□ 1.22
TSPAN4-203ENST00000397397 NRP2O60462 931 aa22.65■■□□□ 1.22
TSPAN4-203ENST00000397397 ANKRD34CP0C6C1 535 aa22.65■■□□□ 1.22
TSPAN4-203ENST00000397397 GRK2P25098 689 aa22.65■■□□□ 1.22
TSPAN4-203ENST00000397397 SERPINB5P36952 375 aa22.65■■□□□ 1.22
TSPAN4-203ENST00000397397 PDX1P52945 283 aa22.65■■□□□ 1.22
TSPAN4-203ENST00000397397 PCDH1Q08174 1060 aa22.65■■□□□ 1.22
TSPAN4-203ENST00000397397 TRAF3Q13114 568 aa22.65■■□□□ 1.22
TSPAN4-203ENST00000397397 TRA2AQ13595 282 aaKnown RBP eCLIP22.65■■□□□ 1.22
TSPAN4-203ENST00000397397 TBCCQ15814 346 aa22.65■■□□□ 1.22
TSPAN4-203ENST00000397397 HES3Q5TGS1 186 aa22.65■■□□□ 1.22
TSPAN4-203ENST00000397397 CES4AQ5XG92 561 aa22.65■■□□□ 1.22
TSPAN4-203ENST00000397397 GPRIN3Q6ZVF9 776 aa22.65■■□□□ 1.22
TSPAN4-203ENST00000397397 KMT5CQ86Y97 462 aa22.65■■□□□ 1.22
TSPAN4-203ENST00000397397 MYLK4Q86YV6 388 aaPredicted RBP22.65■■□□□ 1.22
TSPAN4-203ENST00000397397 DCBLD1Q8N8Z6 715 aa22.65■■□□□ 1.22
TSPAN4-203ENST00000397397 OR4K1Q8NGD4 311 aa22.65■■□□□ 1.22
TSPAN4-203ENST00000397397 TCTN2Q96GX1 697 aa22.65■■□□□ 1.22
TSPAN4-203ENST00000397397 ZNF382Q96SR6 550 aa22.65■■□□□ 1.22
TSPAN4-203ENST00000397397 AIF1LQ9BQI0 150 aa22.65■■□□□ 1.22
TSPAN4-203ENST00000397397 TRMOQ9BU70 441 aa22.65■■□□□ 1.22
TSPAN4-203ENST00000397397 DRC3Q9H069 523 aa22.65■■□□□ 1.22
TSPAN4-203ENST00000397397 MANSC1Q9H8J5 431 aa22.65■■□□□ 1.22
TSPAN4-203ENST00000397397 MID1IP1Q9NPA3 183 aa22.65■■□□□ 1.22
TSPAN4-203ENST00000397397 HAT1O14929 419 aa22.65■■□□□ 1.22
TSPAN4-203ENST00000397397 WFS1O76024 890 aa22.65■■□□□ 1.22
TSPAN4-203ENST00000397397 CLDN9O95484 217 aa22.65■■□□□ 1.22
TSPAN4-203ENST00000397397 EBLN1P0CF75 366 aa22.65■■□□□ 1.22
TSPAN4-203ENST00000397397 GRK3P35626 688 aa22.65■■□□□ 1.22
TSPAN4-203ENST00000397397 MLLT3P42568 568 aaPredicted RBP22.65■■□□□ 1.22
TSPAN4-203ENST00000397397 CASP2P42575 452 aa22.65■■□□□ 1.22
TSPAN4-203ENST00000397397 HSD11B2P80365 405 aa22.65■■□□□ 1.22
TSPAN4-203ENST00000397397 SLBPQ14493 270 aaKnown RBP eCLIP22.65■■□□□ 1.22
TSPAN4-203ENST00000397397 LIPJQ5W064 366 aa22.65■■□□□ 1.22
TSPAN4-203ENST00000397397 ATG16L1Q676U5 607 aa22.65■■□□□ 1.22
TSPAN4-203ENST00000397397 SYVN1Q86TM6 617 aa22.65■■□□□ 1.22
TSPAN4-203ENST00000397397 FAM129CQ86XR2 697 aa22.65■■□□□ 1.22
TSPAN4-203ENST00000397397 OR4F6Q8NGB9 312 aa22.65■■□□□ 1.22
TSPAN4-203ENST00000397397 RAB3IL1Q8TBN0 382 aa22.65■■□□□ 1.22
TSPAN4-203ENST00000397397 ZNF75CPQ92670 426 aaPredicted RBP22.65■■□□□ 1.22
TSPAN4-203ENST00000397397 WDR34Q96EX3 536 aa22.65■■□□□ 1.22
TSPAN4-203ENST00000397397 SLC41A2Q96JW4 573 aa22.65■■□□□ 1.22
TSPAN4-203ENST00000397397 DEPDC7Q96QD5 511 aa22.65■■□□□ 1.22
TSPAN4-203ENST00000397397 EFCAB11Q9BUY7 163 aa22.65■■□□□ 1.22
TSPAN4-203ENST00000397397 SHCBP1LQ9BZQ2 653 aa22.65■■□□□ 1.22
TSPAN4-203ENST00000397397 SPNS1Q9H2V7 528 aa22.65■■□□□ 1.22
TSPAN4-203ENST00000397397 EML4Q9HC35 981 aaKnown RBP22.65■■□□□ 1.22
TSPAN4-203ENST00000397397 PDE7BQ9NP56 450 aa22.65■■□□□ 1.22
TSPAN4-203ENST00000397397 GEMIN8Q9NWZ8 242 aaKnown RBP22.65■■□□□ 1.22
TSPAN4-203ENST00000397397 RNF11Q9Y3C5 154 aa22.65■■□□□ 1.22
TSPAN4-203ENST00000397397 CACNA1AO00555 2505 aa22.64■■□□□ 1.22
TSPAN4-203ENST00000397397 A0A1B0GTL3 188 aa22.64■■□□□ 1.21
TSPAN4-203ENST00000397397 FEZF1A0PJY2 475 aa22.64■■□□□ 1.21
TSPAN4-203ENST00000397397 TMX2-CTNND1H3BSU7 103 aa22.64■■□□□ 1.21
TSPAN4-203ENST00000397397 AGRPO00253 132 aa22.64■■□□□ 1.21
TSPAN4-203ENST00000397397 UBFD1O14562 309 aaKnown RBP22.64■■□□□ 1.21
TSPAN4-203ENST00000397397 UGDHO60701 494 aa22.64■■□□□ 1.21
TSPAN4-203ENST00000397397 CHRNGP07510 517 aa22.64■■□□□ 1.21
TSPAN4-203ENST00000397397 CD22P20273 847 aa22.64■■□□□ 1.21
TSPAN4-203ENST00000397397 CXCR2P25025 360 aa22.64■■□□□ 1.21
TSPAN4-203ENST00000397397 CCKBRP32239 447 aa22.64■■□□□ 1.21
TSPAN4-203ENST00000397397 SLC1A6P48664 564 aa22.64■■□□□ 1.21
TSPAN4-203ENST00000397397 PKNOX1P55347 436 aa22.64■■□□□ 1.21
TSPAN4-203ENST00000397397 ERVPABLB-1P60509 514 aa22.64■■□□□ 1.21
TSPAN4-203ENST00000397397 ABCE1P61221 599 aaKnown RBP22.64■■□□□ 1.21
TSPAN4-203ENST00000397397 REEP5Q00765 189 aa22.64■■□□□ 1.21
TSPAN4-203ENST00000397397 BST1Q10588 318 aa22.64■■□□□ 1.21
TSPAN4-203ENST00000397397 LAPTM5Q13571 262 aa22.64■■□□□ 1.21
TSPAN4-203ENST00000397397 ARL13AQ5H913 290 aaPredicted RBP22.64■■□□□ 1.21
TSPAN4-203ENST00000397397 PAGE2BQ5JRK9 111 aa22.64■■□□□ 1.21
TSPAN4-203ENST00000397397 PLD3Q8IV08 490 aa22.64■■□□□ 1.21
TSPAN4-203ENST00000397397 LSMEM2Q8N112 164 aa22.64■■□□□ 1.21
TSPAN4-203ENST00000397397 KRT78Q8N1N4 520 aa22.64■■□□□ 1.21
TSPAN4-203ENST00000397397 L3MBTL4Q8NA19 623 aa22.64■■□□□ 1.21
TSPAN4-203ENST00000397397 LRRC8CQ8TDW0 803 aa22.64■■□□□ 1.21
TSPAN4-203ENST00000397397 AGAP11Q8TF27 550 aa22.64■■□□□ 1.21
TSPAN4-203ENST00000397397 CKAP2Q8WWK9 683 aa22.64■■□□□ 1.21
TSPAN4-203ENST00000397397 FAM60AQ9NP50 221 aa22.64■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms