RNA–Protein interactions for RNA: ENST00000396355.5

NDE1-202, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-202ENST00000396355 CLCN3P51790 818 aa8.2□□□□□ -1.1
NDE1-202ENST00000396355 AKR1C2P52895 323 aa8.2□□□□□ -1.1
NDE1-202ENST00000396355 MTPNP58546 118 aa8.2□□□□□ -1.1
NDE1-202ENST00000396355 AKR1C1Q04828 323 aa8.2□□□□□ -1.1
NDE1-202ENST00000396355 TARDBPQ13148 414 aaKnown RBP eCLIP8.2□□□□□ -1.1
NDE1-202ENST00000396355 GPR17Q13304 367 aa8.2□□□□□ -1.1
NDE1-202ENST00000396355 ZNF460Q14592 562 aa8.2□□□□□ -1.1
NDE1-202ENST00000396355 MBLAC2Q68D91 279 aa8.2□□□□□ -1.1
NDE1-202ENST00000396355 CEP97Q8IW35 865 aa8.2□□□□□ -1.1
NDE1-202ENST00000396355 CCDC36Q8IYA8 594 aa8.2□□□□□ -1.1
NDE1-202ENST00000396355 TTC29Q8NA56 475 aaPredicted RBP8.2□□□□□ -1.1
NDE1-202ENST00000396355 ZSCAN1Q8NBB4 408 aa8.2□□□□□ -1.1
NDE1-202ENST00000396355 OR2T35Q8NGX2 323 aa8.2□□□□□ -1.1
NDE1-202ENST00000396355 SPPL2AQ8TCT8 520 aa8.2□□□□□ -1.1
NDE1-202ENST00000396355 ZFP42Q96MM3 310 aa8.2□□□□□ -1.1
NDE1-202ENST00000396355 ZFP3Q96NJ6 502 aa8.2□□□□□ -1.1
NDE1-202ENST00000396355 SECISBP2Q96T21 854 aaKnown RBP8.2□□□□□ -1.1
NDE1-202ENST00000396355 GALNT9Q9HCQ5 603 aa8.2□□□□□ -1.1
NDE1-202ENST00000396355 DIMT1Q9UNQ2 313 aaKnown RBP8.2□□□□□ -1.1
NDE1-202ENST00000396355 MRPS23Q9Y3D9 190 aaKnown RBP8.2□□□□□ -1.1
NDE1-202ENST00000396355 IGKV6-21A0A0C4DH24 114 aa8.2□□□□□ -1.1
NDE1-202ENST00000396355 UBA6A0AVT1 1052 aaPredicted RBP8.2□□□□□ -1.1
NDE1-202ENST00000396355 KCNK1O00180 336 aa8.2□□□□□ -1.1
NDE1-202ENST00000396355 SLC1A7O00341 560 aa8.2□□□□□ -1.1
NDE1-202ENST00000396355 RASGRP1O95267 797 aa8.2□□□□□ -1.1
NDE1-202ENST00000396355 ALPIP09923 528 aa8.2□□□□□ -1.1
NDE1-202ENST00000396355 MIPP30301 263 aa8.2□□□□□ -1.1
NDE1-202ENST00000396355 GMFBP60983 142 aa8.2□□□□□ -1.1
NDE1-202ENST00000396355 RAB2AP61019 212 aa8.2□□□□□ -1.1
NDE1-202ENST00000396355 YWHAZP63104 245 aaKnown RBP8.2□□□□□ -1.1
NDE1-202ENST00000396355 TNFRSF17Q02223 184 aa8.2□□□□□ -1.1
NDE1-202ENST00000396355 TEKQ02763 1124 aa8.2□□□□□ -1.1
NDE1-202ENST00000396355 SMN1Q16637 294 aaKnown RBP8.2□□□□□ -1.1
NDE1-202ENST00000396355 AMHR2Q16671 573 aa8.2□□□□□ -1.1
NDE1-202ENST00000396355 TSTQ16762 297 aaKnown RBP8.2□□□□□ -1.1
NDE1-202ENST00000396355 XKRXQ6PP77 449 aa8.2□□□□□ -1.1
NDE1-202ENST00000396355 WASH2PQ6VEQ5 465 aa8.2□□□□□ -1.1
NDE1-202ENST00000396355 UBQLNLQ8IYU4 475 aa8.2□□□□□ -1.1
NDE1-202ENST00000396355 IZUMO1Q8IYV9 350 aa8.2□□□□□ -1.1
NDE1-202ENST00000396355 TMEM132CQ8N3T6 1108 aa8.2□□□□□ -1.1
NDE1-202ENST00000396355 SKA2Q8WVK7 121 aaPredicted RBP8.2□□□□□ -1.1
NDE1-202ENST00000396355 FAM120BQ96EK7 910 aaKnown RBP8.2□□□□□ -1.1
NDE1-202ENST00000396355 CSF3RQ99062 836 aa8.2□□□□□ -1.1
NDE1-202ENST00000396355 BCO2Q9BYV7 579 aa8.2□□□□□ -1.1
NDE1-202ENST00000396355 ZNF518BQ9C0D4 1074 aa8.2□□□□□ -1.1
NDE1-202ENST00000396355 ELOVL4Q9GZR5 314 aa8.2□□□□□ -1.1
NDE1-202ENST00000396355 VRTNQ9H8Y1 702 aa8.2□□□□□ -1.1
NDE1-202ENST00000396355 MRM3Q9HC36 420 aaKnown RBP8.2□□□□□ -1.1
NDE1-202ENST00000396355 B3GNT2Q9NY97 397 aa8.2□□□□□ -1.1
NDE1-202ENST00000396355 PHF11Q9UIL8 331 aa8.2□□□□□ -1.1
NDE1-202ENST00000396355 SAMHD1Q9Y3Z3 626 aaKnown RBP8.2□□□□□ -1.1
NDE1-202ENST00000396355 NEDD8-MDP1E9PL57 170 aa8.2□□□□□ -1.1
NDE1-202ENST00000396355 GATBO75879 557 aaKnown RBP8.2□□□□□ -1.1
NDE1-202ENST00000396355 CBX7O95931 251 aa8.2□□□□□ -1.1
NDE1-202ENST00000396355 URODP06132 367 aa8.2□□□□□ -1.1
NDE1-202ENST00000396355 TGFB3P10600 412 aa8.2□□□□□ -1.1
NDE1-202ENST00000396355 NAGAP17050 411 aa8.2□□□□□ -1.1
NDE1-202ENST00000396355 HSD17B2P37059 387 aa8.2□□□□□ -1.1
NDE1-202ENST00000396355 RAB5BP61020 215 aa8.2□□□□□ -1.1
NDE1-202ENST00000396355 RGS1Q08116 209 aa8.2□□□□□ -1.1
NDE1-202ENST00000396355 ZNF124Q15973 351 aa8.2□□□□□ -1.1
NDE1-202ENST00000396355 BATFQ16520 125 aa8.2□□□□□ -1.1
NDE1-202ENST00000396355 RNF151Q2KHN1 245 aa8.2□□□□□ -1.1
NDE1-202ENST00000396355 ALG11Q2TAA5 492 aa8.2□□□□□ -1.1
NDE1-202ENST00000396355 SLX4IPQ5VYV7 408 aa8.2□□□□□ -1.1
NDE1-202ENST00000396355 MSANTD2Q6P1R3 559 aa8.2□□□□□ -1.1
NDE1-202ENST00000396355 EPGNQ6UW88 154 aa8.2□□□□□ -1.1
NDE1-202ENST00000396355 SH2D5Q6ZV89 423 aa8.2□□□□□ -1.1
NDE1-202ENST00000396355 ADAMTSL2Q86TH1 951 aa8.2□□□□□ -1.1
NDE1-202ENST00000396355 TMEM126BQ8IUX1 230 aa8.2□□□□□ -1.1
NDE1-202ENST00000396355 ZNF680Q8NEM1 530 aa8.2□□□□□ -1.1
NDE1-202ENST00000396355 ADAMTS19Q8TE59 1207 aa8.2□□□□□ -1.1
NDE1-202ENST00000396355 COPS5Q92905 334 aa8.2□□□□□ -1.1
NDE1-202ENST00000396355 TP53INP1Q96A56 240 aa8.2□□□□□ -1.1
NDE1-202ENST00000396355 GUCD1Q96NT3 240 aa8.2□□□□□ -1.1
NDE1-202ENST00000396355 EGFL8Q99944 293 aa8.2□□□□□ -1.1
NDE1-202ENST00000396355 KIFC1Q9BW19 673 aa8.2□□□□□ -1.1
NDE1-202ENST00000396355 ITPAQ9BY32 194 aa8.2□□□□□ -1.1
NDE1-202ENST00000396355 YTHDF1Q9BYJ9 559 aaKnown RBP8.2□□□□□ -1.1
NDE1-202ENST00000396355 ZYG11BQ9C0D3 744 aa8.2□□□□□ -1.1
NDE1-202ENST00000396355 ZNF385DQ9H6B1 395 aa8.2□□□□□ -1.1
NDE1-202ENST00000396355 ACTR8Q9H981 624 aa8.2□□□□□ -1.1
NDE1-202ENST00000396355 TBC1D30Q9Y2I9 924 aa8.2□□□□□ -1.1
NDE1-202ENST00000396355 CITO14578 2027 aa8.2□□□□□ -1.1
NDE1-202ENST00000396355 A0A1W2PPL8 197 aa8.19□□□□□ -1.1
NDE1-202ENST00000396355 OR6C65A6NJZ3 312 aa8.19□□□□□ -1.1
NDE1-202ENST00000396355 WASHC1A8K0Z3 465 aa8.19□□□□□ -1.1
NDE1-202ENST00000396355 KIAA0513O60268 411 aa8.19□□□□□ -1.1
NDE1-202ENST00000396355 SERPINA3P01011 423 aa8.19□□□□□ -1.1
NDE1-202ENST00000396355 CYBAP13498 195 aa8.19□□□□□ -1.1
NDE1-202ENST00000396355 GGT5P36269 586 aa8.19□□□□□ -1.1
NDE1-202ENST00000396355 MAP2K3P46734 347 aa8.19□□□□□ -1.1
NDE1-202ENST00000396355 TKTL1P51854 596 aa8.19□□□□□ -1.1
NDE1-202ENST00000396355 SMAD3P84022 425 aaKnown RBP8.19□□□□□ -1.1
NDE1-202ENST00000396355 C1DQ13901 141 aaKnown RBP8.19□□□□□ -1.1
NDE1-202ENST00000396355 AANATQ16613 207 aa8.19□□□□□ -1.1
NDE1-202ENST00000396355 METTL7BQ6UX53 244 aa8.19□□□□□ -1.1
NDE1-202ENST00000396355 SLC41A1Q8IVJ1 513 aa8.19□□□□□ -1.1
NDE1-202ENST00000396355 CDKL3Q8IVW4 592 aaPredicted RBP8.19□□□□□ -1.1
NDE1-202ENST00000396355 GDPD1Q8N9F7 314 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms