RNA–Protein interactions for RNA: ENST00000390846.1

SNORA40.19-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.19-201ENST00000390846 LHPPQ9H008 270 aa2.04□□□□□ -2.08
SNORA40.19-201ENST00000390846 RAB17Q9H0T7 212 aa2.04□□□□□ -2.08
SNORA40.19-201ENST00000390846 MAGT1Q9H0U3 335 aa2.04□□□□□ -2.08
SNORA40.19-201ENST00000390846 WNT5BQ9H1J7 359 aa2.04□□□□□ -2.08
SNORA40.19-201ENST00000390846 UBQLN3Q9H347 655 aa2.04□□□□□ -2.08
SNORA40.19-201ENST00000390846 ACTR8Q9H981 624 aa2.04□□□□□ -2.08
SNORA40.19-201ENST00000390846 MAGEF1Q9HAY2 307 aa2.04□□□□□ -2.08
SNORA40.19-201ENST00000390846 CHMP1AQ9HD42 196 aaPredicted RBP2.04□□□□□ -2.08
SNORA40.19-201ENST00000390846 GPR108Q9NPR9 543 aa2.04□□□□□ -2.08
SNORA40.19-201ENST00000390846 TRPV5Q9NQA5 729 aa2.04□□□□□ -2.08
SNORA40.19-201ENST00000390846 KLHL1Q9NR64 748 aa2.04□□□□□ -2.08
SNORA40.19-201ENST00000390846 FAM118AQ9NWS6 357 aa2.04□□□□□ -2.08
SNORA40.19-201ENST00000390846 CISD1Q9NZ45 108 aaKnown RBP2.04□□□□□ -2.08
SNORA40.19-201ENST00000390846 PTTG2Q9NZH5 202 aa2.04□□□□□ -2.08
SNORA40.19-201ENST00000390846 TBC1D7Q9P0N9 293 aa2.04□□□□□ -2.08
SNORA40.19-201ENST00000390846 OR14J1Q9UGF5 321 aa2.04□□□□□ -2.08
SNORA40.19-201ENST00000390846 UBQLN2Q9UHD9 624 aa2.04□□□□□ -2.08
SNORA40.19-201ENST00000390846 MAD2L2Q9UI95 211 aa2.04□□□□□ -2.08
SNORA40.19-201ENST00000390846 AGO2Q9UKV8 859 aaKnown RBP2.04□□□□□ -2.08
SNORA40.19-201ENST00000390846 ABT1Q9ULW3 272 aaKnown RBP2.04□□□□□ -2.08
SNORA40.19-201ENST00000390846 ITM2BQ9Y287 266 aa2.04□□□□□ -2.08
SNORA40.19-201ENST00000390846 MAB21L2Q9Y586 359 aa2.04□□□□□ -2.08
SNORA40.19-201ENST00000390846 ZHX2Q9Y6X8 837 aa2.04□□□□□ -2.08
SNORA40.19-201ENST00000390846 U3KQV3 271 aa2.04□□□□□ -2.08
SNORA40.19-201ENST00000390846 OBSCNQ5VST9 7968 aa2.04□□□□□ -2.08
SNORA40.19-201ENST00000390846 SCN5AQ14524 2016 aa2.03□□□□□ -2.08
SNORA40.19-201ENST00000390846 WDR81Q562E7 1941 aa2.03□□□□□ -2.08
SNORA40.19-201ENST00000390846 TNIKQ9UKE5 1360 aa2.03□□□□□ -2.08
SNORA40.19-201ENST00000390846 ABCC4O15439 1325 aa2.03□□□□□ -2.08
SNORA40.19-201ENST00000390846 EMSYQ7Z589 1322 aa2.03□□□□□ -2.08
SNORA40.19-201ENST00000390846 PRSS51A0A1B0GVH4 220 aa2.03□□□□□ -2.08
SNORA40.19-201ENST00000390846 TYW5A2RUC4 315 aaKnown RBP2.03□□□□□ -2.08
SNORA40.19-201ENST00000390846 NEMP2A6NFY4 417 aa2.03□□□□□ -2.08
SNORA40.19-201ENST00000390846 NCF1BA6NI72 391 aaPredicted RBP2.03□□□□□ -2.08
SNORA40.19-201ENST00000390846 ZNF716A6NP11 495 aa2.03□□□□□ -2.08
SNORA40.19-201ENST00000390846 SRRM4A7MD48 611 aaKnown RBP2.03□□□□□ -2.08
SNORA40.19-201ENST00000390846 WASHC1A8K0Z3 465 aa2.03□□□□□ -2.08
SNORA40.19-201ENST00000390846 NCF1CA8MVU1 366 aaPredicted RBP2.03□□□□□ -2.08
SNORA40.19-201ENST00000390846 WASH3PC4AMC7 463 aa2.03□□□□□ -2.08
SNORA40.19-201ENST00000390846 KBTBD13C9JR72 458 aa2.03□□□□□ -2.08
SNORA40.19-201ENST00000390846 H0YC42 278 aa2.03□□□□□ -2.08
SNORA40.19-201ENST00000390846 KIF2AO00139 706 aaPredicted RBP2.03□□□□□ -2.08
SNORA40.19-201ENST00000390846 FOXE1O00358 373 aaPredicted RBP2.03□□□□□ -2.08
SNORA40.19-201ENST00000390846 E2F3O00716 465 aa2.03□□□□□ -2.08
SNORA40.19-201ENST00000390846 MAP2K7O14733 419 aa2.03□□□□□ -2.08
SNORA40.19-201ENST00000390846 MEIS2O14770 477 aa2.03□□□□□ -2.08
SNORA40.19-201ENST00000390846 KLF11O14901 512 aa2.03□□□□□ -2.08
SNORA40.19-201ENST00000390846 FLRT2O43155 660 aa2.03□□□□□ -2.08
SNORA40.19-201ENST00000390846 TLX2O43763 284 aaPredicted RBP2.03□□□□□ -2.08
SNORA40.19-201ENST00000390846 KIF1CO43896 1103 aaKnown RBP2.03□□□□□ -2.08
SNORA40.19-201ENST00000390846 UGDHO60701 494 aa2.03□□□□□ -2.08
SNORA40.19-201ENST00000390846 PRAMEF11O60813 436 aa2.03□□□□□ -2.08
SNORA40.19-201ENST00000390846 CSDE1O75534 798 aaKnown RBP2.03□□□□□ -2.08
SNORA40.19-201ENST00000390846 TOM1L1O75674 476 aa2.03□□□□□ -2.08
SNORA40.19-201ENST00000390846 ATP6AP2O75787 350 aa2.03□□□□□ -2.08
SNORA40.19-201ENST00000390846 STBD1O95210 358 aa2.03□□□□□ -2.08
SNORA40.19-201ENST00000390846 PGLSO95336 258 aa2.03□□□□□ -2.08
SNORA40.19-201ENST00000390846 EGFP01133 1207 aa2.03□□□□□ -2.08
SNORA40.19-201ENST00000390846 CHRNGP07510 517 aa2.03□□□□□ -2.08
SNORA40.19-201ENST00000390846 FGF4P08620 206 aa2.03□□□□□ -2.08
SNORA40.19-201ENST00000390846 OR2T7P0C7T2 308 aa2.03□□□□□ -2.08
SNORA40.19-201ENST00000390846 ZNF735P0CB33 412 aa2.03□□□□□ -2.08
SNORA40.19-201ENST00000390846 SPP1P10451 314 aa2.03□□□□□ -2.08
SNORA40.19-201ENST00000390846 THRBP10828 461 aa2.03□□□□□ -2.08
SNORA40.19-201ENST00000390846 EPB41P11171 864 aaKnown RBP2.03□□□□□ -2.08
SNORA40.19-201ENST00000390846 UNGP13051 313 aaPredicted RBP2.03□□□□□ -2.08
SNORA40.19-201ENST00000390846 MAOAP21397 527 aa2.03□□□□□ -2.08
SNORA40.19-201ENST00000390846 TUBG1P23258 451 aa2.03□□□□□ -2.08
SNORA40.19-201ENST00000390846 CA8P35219 290 aa2.03□□□□□ -2.08
SNORA40.19-201ENST00000390846 RFC4P35249 363 aa2.03□□□□□ -2.08
SNORA40.19-201ENST00000390846 ADRA1AP35348 466 aa2.03□□□□□ -2.08
SNORA40.19-201ENST00000390846 PTGER4P35408 488 aa2.03□□□□□ -2.08
SNORA40.19-201ENST00000390846 SLC6A12P48065 614 aa2.03□□□□□ -2.08
SNORA40.19-201ENST00000390846 PRRX1P54821 245 aa2.03□□□□□ -2.08
SNORA40.19-201ENST00000390846 BRWD1-AS2P59051 145 aa2.03□□□□□ -2.08
SNORA40.19-201ENST00000390846 MAT1AQ00266 395 aaKnown RBP2.03□□□□□ -2.08
SNORA40.19-201ENST00000390846 ACY1Q03154 408 aa2.03□□□□□ -2.08
SNORA40.19-201ENST00000390846 LIPEQ05469 1076 aa2.03□□□□□ -2.08
SNORA40.19-201ENST00000390846 LTBQ06643 244 aa2.03□□□□□ -2.08
SNORA40.19-201ENST00000390846 ILF3Q12906 894 aaKnown RBP eCLIP2.03□□□□□ -2.08
SNORA40.19-201ENST00000390846 HSPB3Q12988 150 aa2.03□□□□□ -2.08
SNORA40.19-201ENST00000390846 PRKAA1Q13131 559 aa2.03□□□□□ -2.08
SNORA40.19-201ENST00000390846 DDX39BQ13838 428 aaKnown RBP2.03□□□□□ -2.08
SNORA40.19-201ENST00000390846 IDI1Q13907 227 aa2.03□□□□□ -2.08
SNORA40.19-201ENST00000390846 KRT33BQ14525 404 aa2.03□□□□□ -2.08
SNORA40.19-201ENST00000390846 ARHGEF6Q15052 776 aa2.03□□□□□ -2.08
SNORA40.19-201ENST00000390846 EFNB3Q15768 340 aa2.03□□□□□ -2.08
SNORA40.19-201ENST00000390846 MEP1AQ16819 746 aa2.03□□□□□ -2.08
SNORA40.19-201ENST00000390846 IMMTQ16891 758 aaKnown RBP2.03□□□□□ -2.08
SNORA40.19-201ENST00000390846 SYT16Q17RD7 645 aa2.03□□□□□ -2.08
SNORA40.19-201ENST00000390846 ANKRD55Q3KP44 614 aa2.03□□□□□ -2.08
SNORA40.19-201ENST00000390846 FUT11Q495W5 492 aa2.03□□□□□ -2.08
SNORA40.19-201ENST00000390846 PLEKHO1Q53GL0 409 aaPredicted RBP2.03□□□□□ -2.08
SNORA40.19-201ENST00000390846 RAB6CQ53S08 254 aa2.03□□□□□ -2.08
SNORA40.19-201ENST00000390846 HSP90AB3PQ58FF7 597 aa2.03□□□□□ -2.08
SNORA40.19-201ENST00000390846 LRRC73Q5JTD7 316 aa2.03□□□□□ -2.08
SNORA40.19-201ENST00000390846 ENTPD8Q5MY95 495 aa2.03□□□□□ -2.08
SNORA40.19-201ENST00000390846 CCNYL2Q5T2Q4 361 aa2.03□□□□□ -2.08
SNORA40.19-201ENST00000390846 LCE3CQ5T5A8 94 aa2.03□□□□□ -2.08
SNORA40.19-201ENST00000390846 ATF7IP2Q5U623 682 aa2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms