RNA–Protein interactions for RNA: ENST00000390462.1

TRAV35-201, Transcript of T cell receptor alpha variable 35, humanhuman

BASIC

Gene TRAV35, Length 330 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV35-201ENST00000390462 ADAMTS5Q9UNA0 930 aa6.15□□□□□ -1.42
TRAV35-201ENST00000390462 SH3GLB1Q9Y371 365 aa6.15□□□□□ -1.42
TRAV35-201ENST00000390462 MRPS2Q9Y399 296 aaKnown RBP6.15□□□□□ -1.42
TRAV35-201ENST00000390462 SHANK3Q9BYB0 1731 aa6.15□□□□□ -1.42
TRAV35-201ENST00000390462 NPC1L1Q9UHC9 1359 aa6.15□□□□□ -1.43
TRAV35-201ENST00000390462 FMN2Q9NZ56 1722 aa6.14□□□□□ -1.43
TRAV35-201ENST00000390462 RGPD3A6NKT7 1758 aaPredicted RBP6.14□□□□□ -1.43
TRAV35-201ENST00000390462 RGPD4Q7Z3J3 1758 aa6.14□□□□□ -1.43
TRAV35-201ENST00000390462 A0A075B6Q4 140 aa6.14□□□□□ -1.43
TRAV35-201ENST00000390462 A0A0U1RQV5 110 aa6.14□□□□□ -1.43
TRAV35-201ENST00000390462 TMEM129A0AVI4 362 aa6.14□□□□□ -1.43
TRAV35-201ENST00000390462 NEMP2A6NFY4 417 aa6.14□□□□□ -1.43
TRAV35-201ENST00000390462 OGTO15294 1046 aa6.14□□□□□ -1.43
TRAV35-201ENST00000390462 SLC16A5O15375 505 aa6.14□□□□□ -1.43
TRAV35-201ENST00000390462 DCXO43602 365 aa6.14□□□□□ -1.43
TRAV35-201ENST00000390462 PDE9AO76083 593 aa6.14□□□□□ -1.43
TRAV35-201ENST00000390462 RGS11O94810 467 aa6.14□□□□□ -1.43
TRAV35-201ENST00000390462 MT-CO3P00414 261 aa6.14□□□□□ -1.43
TRAV35-201ENST00000390462 HMBSP08397 361 aa6.14□□□□□ -1.43
TRAV35-201ENST00000390462 CYP2D6P10635 497 aa6.14□□□□□ -1.43
TRAV35-201ENST00000390462 BMP5P22003 454 aa6.14□□□□□ -1.43
TRAV35-201ENST00000390462 HRH2P25021 359 aa6.14□□□□□ -1.43
TRAV35-201ENST00000390462 MARCKSP29966 332 aaPredicted RBP6.14□□□□□ -1.43
TRAV35-201ENST00000390462 RFC2P35250 354 aa6.14□□□□□ -1.43
TRAV35-201ENST00000390462 HSD17B2P37059 387 aa6.14□□□□□ -1.43
TRAV35-201ENST00000390462 SOX2P48431 317 aa6.14□□□□□ -1.43
TRAV35-201ENST00000390462 ALDH7A1P49419 539 aaKnown RBP6.14□□□□□ -1.43
TRAV35-201ENST00000390462 PEX5P50542 639 aa6.14□□□□□ -1.43
TRAV35-201ENST00000390462 METAP2P50579 478 aaKnown RBP eCLIP6.14□□□□□ -1.43
TRAV35-201ENST00000390462 SSTP61278 116 aa6.14□□□□□ -1.43
TRAV35-201ENST00000390462 CUL3Q13618 768 aa6.14□□□□□ -1.43
TRAV35-201ENST00000390462 PRKD1Q15139 912 aaPredicted RBP6.14□□□□□ -1.43
TRAV35-201ENST00000390462 KRT71Q3SY84 523 aa6.14□□□□□ -1.43
TRAV35-201ENST00000390462 Q5PR19 223 aa6.14□□□□□ -1.43
TRAV35-201ENST00000390462 LYSMD4Q5XG99 296 aa6.14□□□□□ -1.43
TRAV35-201ENST00000390462 GGNBP1Q5YKI7 109 aa6.14□□□□□ -1.43
TRAV35-201ENST00000390462 METTL2BQ6P1Q9 378 aaKnown RBP6.14□□□□□ -1.43
TRAV35-201ENST00000390462 VWA1Q6PCB0 445 aa6.14□□□□□ -1.43
TRAV35-201ENST00000390462 EFL1Q7Z2Z2 1120 aaKnown RBP6.14□□□□□ -1.43
TRAV35-201ENST00000390462 TMCO2Q7Z6W1 182 aaPredicted RBP6.14□□□□□ -1.43
TRAV35-201ENST00000390462 ADGRD2Q7Z7M1 963 aa6.14□□□□□ -1.43
TRAV35-201ENST00000390462 CCDC63Q8NA47 563 aa6.14□□□□□ -1.43
TRAV35-201ENST00000390462 SCCPDHQ8NBX0 429 aa6.14□□□□□ -1.43
TRAV35-201ENST00000390462 CPEB3Q8NE35 698 aaKnown RBP6.14□□□□□ -1.43
TRAV35-201ENST00000390462 OTULINQ96BN8 352 aa6.14□□□□□ -1.43
TRAV35-201ENST00000390462 RHBDF1Q96CC6 855 aa6.14□□□□□ -1.43
TRAV35-201ENST00000390462 RASD2Q96D21 266 aa6.14□□□□□ -1.43
TRAV35-201ENST00000390462 P2RY11Q96G91 374 aa6.14□□□□□ -1.43
TRAV35-201ENST00000390462 METTL2AQ96IZ6 378 aaKnown RBP6.14□□□□□ -1.43
TRAV35-201ENST00000390462 OR14A2Q96R54 314 aa6.14□□□□□ -1.43
TRAV35-201ENST00000390462 LMF1Q96S06 567 aa6.14□□□□□ -1.43
TRAV35-201ENST00000390462 FSD1LQ9BXM9 530 aa6.14□□□□□ -1.43
TRAV35-201ENST00000390462 MCOLN1Q9GZU1 580 aa6.14□□□□□ -1.43
TRAV35-201ENST00000390462 FAM192AQ9GZU8 254 aa6.14□□□□□ -1.43
TRAV35-201ENST00000390462 WWTR1Q9GZV5 400 aa6.14□□□□□ -1.43
TRAV35-201ENST00000390462 RIOX1Q9H6W3 641 aa6.14□□□□□ -1.43
TRAV35-201ENST00000390462 UPF2Q9HAU5 1272 aaKnown RBP6.14□□□□□ -1.43
TRAV35-201ENST00000390462 TRPC7Q9HCX4 862 aa6.14□□□□□ -1.43
TRAV35-201ENST00000390462 RAB9BQ9NP90 201 aa6.14□□□□□ -1.43
TRAV35-201ENST00000390462 AGPAT5Q9NUQ2 364 aa6.14□□□□□ -1.43
TRAV35-201ENST00000390462 CISD1Q9NZ45 108 aaKnown RBP6.14□□□□□ -1.43
TRAV35-201ENST00000390462 PLEKHB1Q9UF11 243 aaPredicted RBP6.14□□□□□ -1.43
TRAV35-201ENST00000390462 ACSL5Q9ULC5 683 aa6.14□□□□□ -1.43
TRAV35-201ENST00000390462 NME7Q9Y5B8 376 aa6.14□□□□□ -1.43
TRAV35-201ENST00000390462 STON1Q9Y6Q2 735 aa6.14□□□□□ -1.43
TRAV35-201ENST00000390462 ABCC4O15439 1325 aa6.14□□□□□ -1.43
TRAV35-201ENST00000390462 NEXMIFQ5QGS0 1516 aa6.14□□□□□ -1.43
TRAV35-201ENST00000390462 IFT172Q9UG01 1749 aa6.13□□□□□ -1.43
TRAV35-201ENST00000390462 COL14A1Q05707 1796 aaKnown RBP6.13□□□□□ -1.43
TRAV35-201ENST00000390462 WDR27A2RRH5 827 aa6.13□□□□□ -1.43
TRAV35-201ENST00000390462 HELTA6NFD8 242 aa6.13□□□□□ -1.43
TRAV35-201ENST00000390462 J3QR06 171 aa6.13□□□□□ -1.43
TRAV35-201ENST00000390462 PSMD3O43242 534 aa6.13□□□□□ -1.43
TRAV35-201ENST00000390462 NMT2O60551 498 aa6.13□□□□□ -1.43
TRAV35-201ENST00000390462 SNNO75324 88 aaPredicted RBP6.13□□□□□ -1.43
TRAV35-201ENST00000390462 FLOT1O75955 427 aa6.13□□□□□ -1.43
TRAV35-201ENST00000390462 TOP3BO95985 862 aaKnown RBP6.13□□□□□ -1.43
TRAV35-201ENST00000390462 GAS8O95995 478 aa6.13□□□□□ -1.43
TRAV35-201ENST00000390462 AGTP01019 485 aa6.13□□□□□ -1.43
TRAV35-201ENST00000390462 NPPAP01160 153 aa6.13□□□□□ -1.43
TRAV35-201ENST00000390462 PAICSP22234 425 aaKnown RBP6.13□□□□□ -1.43
TRAV35-201ENST00000390462 PAX7P23759 505 aa6.13□□□□□ -1.43
TRAV35-201ENST00000390462 CHATP28329 748 aa6.13□□□□□ -1.43
TRAV35-201ENST00000390462 PCSK6P29122 969 aa6.13□□□□□ -1.43
TRAV35-201ENST00000390462 CAPGP40121 348 aa6.13□□□□□ -1.43
TRAV35-201ENST00000390462 SLC1A3P43003 542 aa6.13□□□□□ -1.43
TRAV35-201ENST00000390462 OR3A1P47881 315 aa6.13□□□□□ -1.43
TRAV35-201ENST00000390462 CARD18P57730 90 aa6.13□□□□□ -1.43
TRAV35-201ENST00000390462 EIF3EP60228 445 aaKnown RBP6.13□□□□□ -1.43
TRAV35-201ENST00000390462 RPS8P62241 208 aaKnown RBP6.13□□□□□ -1.43
TRAV35-201ENST00000390462 IRX3P78415 501 aaPredicted RBP6.13□□□□□ -1.43
TRAV35-201ENST00000390462 SRSF5Q13243 272 aaKnown RBP6.13□□□□□ -1.43
TRAV35-201ENST00000390462 STIM1Q13586 685 aa6.13□□□□□ -1.43
TRAV35-201ENST00000390462 KPNB1Q14974 876 aaKnown RBP6.13□□□□□ -1.43
TRAV35-201ENST00000390462 PDK3Q15120 406 aa6.13□□□□□ -1.43
TRAV35-201ENST00000390462 ACKR1Q16570 336 aa6.13□□□□□ -1.43
TRAV35-201ENST00000390462 ANKRD55Q3KP44 614 aa6.13□□□□□ -1.43
TRAV35-201ENST00000390462 ARMC12Q5T9G4 340 aa6.13□□□□□ -1.43
TRAV35-201ENST00000390462 AGAP6Q5VW22 663 aa6.13□□□□□ -1.43
TRAV35-201ENST00000390462 FAM46CQ5VWP2 391 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms