RNA–Protein interactions for RNA: ENST00000390399.3

TRBV27-201, Transcript of T cell receptor beta variable 27, humanhuman

APPRIS P1 BASIC

Gene TRBV27, Length 387 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV27-201ENST00000390399 TCTN3Q6NUS6 607 aa8.54□□□□□ -1.04
TRBV27-201ENST00000390399 PRMT9Q6P2P2 845 aa8.54□□□□□ -1.04
TRBV27-201ENST00000390399 LCTLQ6UWM7 567 aa8.54□□□□□ -1.04
TRBV27-201ENST00000390399 TMEM207Q6UWW9 146 aa8.54□□□□□ -1.04
TRBV27-201ENST00000390399 ZDHHC24Q6UX98 284 aa8.54□□□□□ -1.04
TRBV27-201ENST00000390399 ATG14Q6ZNE5 492 aa8.54□□□□□ -1.04
TRBV27-201ENST00000390399 C3orf62Q6ZUJ4 267 aa8.54□□□□□ -1.04
TRBV27-201ENST00000390399 ASB18Q6ZVZ8 466 aa8.54□□□□□ -1.04
TRBV27-201ENST00000390399 MED25Q71SY5 747 aa8.54□□□□□ -1.04
TRBV27-201ENST00000390399 COX15Q7KZN9 410 aa8.54□□□□□ -1.04
TRBV27-201ENST00000390399 OVCH1Q7RTY7 1134 aa8.54□□□□□ -1.04
TRBV27-201ENST00000390399 C17orf64Q86WR6 236 aa8.54□□□□□ -1.04
TRBV27-201ENST00000390399 PLD3Q8IV08 490 aa8.54□□□□□ -1.04
TRBV27-201ENST00000390399 DTWD1Q8N5C7 304 aa8.54□□□□□ -1.04
TRBV27-201ENST00000390399 TMEM102Q8N9M5 508 aaPredicted RBP8.54□□□□□ -1.04
TRBV27-201ENST00000390399 ZDHHC19Q8WVZ1 309 aaPredicted RBP8.54□□□□□ -1.04
TRBV27-201ENST00000390399 ATL1Q8WXF7 558 aa8.54□□□□□ -1.04
TRBV27-201ENST00000390399 COL26A1Q96A83 441 aa8.54□□□□□ -1.04
TRBV27-201ENST00000390399 PTERQ96BW5 349 aa8.54□□□□□ -1.04
TRBV27-201ENST00000390399 FBXL8Q96CD0 374 aa8.54□□□□□ -1.04
TRBV27-201ENST00000390399 PDLIM5Q96HC4 596 aaKnown RBP8.54□□□□□ -1.04
TRBV27-201ENST00000390399 PRAP1Q96NZ9 151 aa8.54□□□□□ -1.04
TRBV27-201ENST00000390399 IP6K3Q96PC2 410 aa8.54□□□□□ -1.04
TRBV27-201ENST00000390399 OR2A5Q96R48 311 aa8.54□□□□□ -1.04
TRBV27-201ENST00000390399 MCMBPQ9BTE3 642 aa8.54□□□□□ -1.04
TRBV27-201ENST00000390399 SLC25A23Q9BV35 468 aa8.54□□□□□ -1.04
TRBV27-201ENST00000390399 SGPP1Q9BX95 441 aa8.54□□□□□ -1.04
TRBV27-201ENST00000390399 SLC26A1Q9H2B4 701 aa8.54□□□□□ -1.04
TRBV27-201ENST00000390399 WDR54Q9H977 334 aa8.54□□□□□ -1.04
TRBV27-201ENST00000390399 SYNPO2LQ9H987 977 aa8.54□□□□□ -1.04
TRBV27-201ENST00000390399 POPDC3Q9HBV1 291 aa8.54□□□□□ -1.04
TRBV27-201ENST00000390399 ZNF304Q9HCX3 659 aa8.54□□□□□ -1.04
TRBV27-201ENST00000390399 TMEM184CQ9NVA4 438 aa8.54□□□□□ -1.04
TRBV27-201ENST00000390399 CTSFQ9UBX1 484 aa8.54□□□□□ -1.04
TRBV27-201ENST00000390399 NXT1Q9UKK6 140 aaKnown RBP8.54□□□□□ -1.04
TRBV27-201ENST00000390399 IKZF3Q9UKT9 509 aa8.54□□□□□ -1.04
TRBV27-201ENST00000390399 NOVA2Q9UNW9 492 aaKnown RBP8.54□□□□□ -1.04
TRBV27-201ENST00000390399 RUVBL1Q9Y265 456 aaKnown RBP8.54□□□□□ -1.04
TRBV27-201ENST00000390399 MAU2Q9Y6X3 613 aa8.54□□□□□ -1.04
TRBV27-201ENST00000390399 BOD1L1Q8NFC6 3051 aa8.54□□□□□ -1.04
TRBV27-201ENST00000390399 PCSK5Q92824 1860 aa8.53□□□□□ -1.04
TRBV27-201ENST00000390399 FAM159BA6NKW6 160 aa8.53□□□□□ -1.04
TRBV27-201ENST00000390399 CXorf49A8MYA2 514 aaPredicted RBP8.53□□□□□ -1.04
TRBV27-201ENST00000390399 J3QKU1 62 aa8.53□□□□□ -1.04
TRBV27-201ENST00000390399 K7EM74 188 aa8.53□□□□□ -1.04
TRBV27-201ENST00000390399 CDC7O00311 574 aa8.53□□□□□ -1.04
TRBV27-201ENST00000390399 TXNDC9O14530 226 aa8.53□□□□□ -1.04
TRBV27-201ENST00000390399 P2RX6O15547 441 aa8.53□□□□□ -1.04
TRBV27-201ENST00000390399 PRPF4O43172 522 aaKnown RBP eCLIP8.53□□□□□ -1.04
TRBV27-201ENST00000390399 SUV39H1O43463 412 aa8.53□□□□□ -1.04
TRBV27-201ENST00000390399 GUCA1CO95843 209 aa8.53□□□□□ -1.04
TRBV27-201ENST00000390399 IGHEP01854 428 aa8.53□□□□□ -1.04
TRBV27-201ENST00000390399 CDH1P12830 882 aa8.53□□□□□ -1.04
TRBV27-201ENST00000390399 FBLP22087 321 aaKnown RBP8.53□□□□□ -1.04
TRBV27-201ENST00000390399 STX2P32856 288 aa8.53□□□□□ -1.04
TRBV27-201ENST00000390399 GP5P40197 560 aa8.53□□□□□ -1.04
TRBV27-201ENST00000390399 MAGEA4P43358 317 aa8.53□□□□□ -1.04
TRBV27-201ENST00000390399 PGDP52209 483 aa8.53□□□□□ -1.04
TRBV27-201ENST00000390399 RPS15AP62244 130 aaKnown RBP8.53□□□□□ -1.04
TRBV27-201ENST00000390399 POU4F1Q01851 419 aa8.53□□□□□ -1.04
TRBV27-201ENST00000390399 GUCY2DQ02846 1103 aa8.53□□□□□ -1.04
TRBV27-201ENST00000390399 NKG7Q16617 165 aa8.53□□□□□ -1.04
TRBV27-201ENST00000390399 PPP1R3AQ16821 1122 aa8.53□□□□□ -1.04
TRBV27-201ENST00000390399 GARNL3Q5VVW2 1013 aa8.53□□□□□ -1.04
TRBV27-201ENST00000390399 SBSNQ6UWP8 590 aa8.53□□□□□ -1.04
TRBV27-201ENST00000390399 SHISA6Q6ZSJ9 500 aa8.53□□□□□ -1.04
TRBV27-201ENST00000390399 FRA10AC1Q70Z53 315 aa8.53□□□□□ -1.04
TRBV27-201ENST00000390399 CYS1Q717R9 158 aa8.53□□□□□ -1.04
TRBV27-201ENST00000390399 PPP1R32Q7Z5V6 425 aa8.53□□□□□ -1.04
TRBV27-201ENST00000390399 CEP97Q8IW35 865 aa8.53□□□□□ -1.04
TRBV27-201ENST00000390399 CTAGE3PQ8IX95 158 aa8.53□□□□□ -1.04
TRBV27-201ENST00000390399 OR56A3Q8NH54 315 aa8.53□□□□□ -1.04
TRBV27-201ENST00000390399 ANKRD49Q8WVL7 239 aa8.53□□□□□ -1.04
TRBV27-201ENST00000390399 ANKRD7Q92527 254 aa8.53□□□□□ -1.04
TRBV27-201ENST00000390399 PYCR2Q96C36 320 aa8.53□□□□□ -1.04
TRBV27-201ENST00000390399 MVB12AQ96EY5 273 aa8.53□□□□□ -1.04
TRBV27-201ENST00000390399 TSPAN17Q96FV3 270 aa8.53□□□□□ -1.04
TRBV27-201ENST00000390399 FER1L6-AS2Q96M78 137 aa8.53□□□□□ -1.04
TRBV27-201ENST00000390399 SPSB2Q99619 263 aa8.53□□□□□ -1.04
TRBV27-201ENST00000390399 RBBP8Q99708 897 aa8.53□□□□□ -1.04
TRBV27-201ENST00000390399 CPNE1Q99829 537 aa8.53□□□□□ -1.04
TRBV27-201ENST00000390399 HAUS8Q9BT25 410 aa8.53□□□□□ -1.04
TRBV27-201ENST00000390399 LRRC1Q9BTT6 524 aa8.53□□□□□ -1.04
TRBV27-201ENST00000390399 SOX17Q9H6I2 414 aaPredicted RBP8.53□□□□□ -1.04
TRBV27-201ENST00000390399 CAB39LQ9H9S4 337 aa8.53□□□□□ -1.04
TRBV27-201ENST00000390399 GPAMQ9HCL2 828 aa8.53□□□□□ -1.04
TRBV27-201ENST00000390399 P4HTMQ9NXG6 502 aa8.53□□□□□ -1.04
TRBV27-201ENST00000390399 ZNF282Q9UDV7 671 aaPredicted RBP8.53□□□□□ -1.04
TRBV27-201ENST00000390399 ANAPC2Q9UJX6 822 aa8.53□□□□□ -1.04
TRBV27-201ENST00000390399 G3BP2Q9UN86 482 aaKnown RBP8.53□□□□□ -1.04
TRBV27-201ENST00000390399 SH2B3Q9UQQ2 575 aa8.53□□□□□ -1.04
TRBV27-201ENST00000390399 MTO1Q9Y2Z2 717 aaKnown RBP8.53□□□□□ -1.04
TRBV27-201ENST00000390399 ATRXP46100 2492 aa8.53□□□□□ -1.04
TRBV27-201ENST00000390399 BSNQ9UPA5 3926 aa8.52□□□□□ -1.04
TRBV27-201ENST00000390399 A6NL46 340 aa8.52□□□□□ -1.05
TRBV27-201ENST00000390399 PYCARD-AS1I3L0S3 204 aa8.52□□□□□ -1.05
TRBV27-201ENST00000390399 KIF2AO00139 706 aaPredicted RBP8.52□□□□□ -1.05
TRBV27-201ENST00000390399 CEACAM4O75871 244 aa8.52□□□□□ -1.05
TRBV27-201ENST00000390399 STATHP02808 62 aa8.52□□□□□ -1.05
TRBV27-201ENST00000390399 PDGFAP04085 211 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms