RNA–Protein interactions for RNA: ENST00000378572.7

PRPF18-202, Transcript of pre-mRNA processing factor 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF18, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-202ENST00000378572 MFRPQ9BY79 579 aa13.24□□□□□ -0.29
PRPF18-202ENST00000378572 INTS9Q9NV88 658 aaKnown RBP13.24□□□□□ -0.29
PRPF18-202ENST00000378572 SERTAD3Q9UJW9 196 aa13.24□□□□□ -0.29
PRPF18-202ENST00000378572 E5RI56 91 aa13.23□□□□□ -0.29
PRPF18-202ENST00000378572 BTN3A3O00478 584 aa13.23□□□□□ -0.29
PRPF18-202ENST00000378572 SGTAO43765 313 aa13.23□□□□□ -0.29
PRPF18-202ENST00000378572 NIPSNAP2O75323 286 aa13.23□□□□□ -0.29
PRPF18-202ENST00000378572 KLHL2O95198 593 aa13.23□□□□□ -0.29
PRPF18-202ENST00000378572 DHRS4L1P0CG22 281 aa13.23□□□□□ -0.29
PRPF18-202ENST00000378572 ZNF37AP17032 561 aaPredicted RBP13.23□□□□□ -0.29
PRPF18-202ENST00000378572 AGXTP21549 392 aa13.23□□□□□ -0.29
PRPF18-202ENST00000378572 PRDX3P30048 256 aaKnown RBP13.23□□□□□ -0.29
PRPF18-202ENST00000378572 OTX2P32243 289 aa13.23□□□□□ -0.29
PRPF18-202ENST00000378572 CD97P48960 835 aa13.23□□□□□ -0.29
PRPF18-202ENST00000378572 ITGA1P56199 1179 aa13.23□□□□□ -0.29
PRPF18-202ENST00000378572 PDAP1Q13442 181 aaKnown RBP13.23□□□□□ -0.29
PRPF18-202ENST00000378572 RAPSNQ13702 412 aa13.23□□□□□ -0.29
PRPF18-202ENST00000378572 ZNF460Q14592 562 aa13.23□□□□□ -0.29
PRPF18-202ENST00000378572 CCDC153Q494R4 210 aa13.23□□□□□ -0.29
PRPF18-202ENST00000378572 PLEKHS1Q5SXH7 462 aa13.23□□□□□ -0.29
PRPF18-202ENST00000378572 LCN10Q6JVE6 187 aa13.23□□□□□ -0.29
PRPF18-202ENST00000378572 AMIGO1Q86WK6 493 aa13.23□□□□□ -0.29
PRPF18-202ENST00000378572 LRFN5Q96NI6 719 aa13.23□□□□□ -0.29
PRPF18-202ENST00000378572 GPR21Q99679 349 aa13.23□□□□□ -0.29
PRPF18-202ENST00000378572 NLNQ9BYT8 704 aa13.23□□□□□ -0.29
PRPF18-202ENST00000378572 MVB12BQ9H7P6 319 aa13.23□□□□□ -0.29
PRPF18-202ENST00000378572 SLAMF7Q9NQ25 335 aa13.23□□□□□ -0.29
PRPF18-202ENST00000378572 ACTR10Q9NZ32 417 aa13.23□□□□□ -0.29
PRPF18-202ENST00000378572 GPN3Q9UHW5 284 aaPredicted RBP13.23□□□□□ -0.29
PRPF18-202ENST00000378572 TRMT6Q9UJA5 497 aaKnown RBP13.23□□□□□ -0.29
PRPF18-202ENST00000378572 ADAM21Q9UKJ8 722 aa13.23□□□□□ -0.29
PRPF18-202ENST00000378572 TCFL5Q9UL49 500 aa13.23□□□□□ -0.29
PRPF18-202ENST00000378572 PADI2Q9Y2J8 665 aa13.23□□□□□ -0.29
PRPF18-202ENST00000378572 DHRS7Q9Y394 339 aa13.23□□□□□ -0.29
PRPF18-202ENST00000378572 ZNF451Q9Y4E5 1061 aa13.23□□□□□ -0.29
PRPF18-202ENST00000378572 PRSS21Q9Y6M0 314 aa13.23□□□□□ -0.29
PRPF18-202ENST00000378572 C17orf113A0A1B0GUU1 675 aa13.22□□□□□ -0.29
PRPF18-202ENST00000378572 CCDC189A1A4V9 331 aa13.22□□□□□ -0.29
PRPF18-202ENST00000378572 APOA4P06727 396 aa13.22□□□□□ -0.29
PRPF18-202ENST00000378572 RAB40ALP0C0E4 278 aa13.22□□□□□ -0.29
PRPF18-202ENST00000378572 PDHA2P29803 388 aa13.22□□□□□ -0.29
PRPF18-202ENST00000378572 CLCN7P51798 805 aa13.22□□□□□ -0.29
PRPF18-202ENST00000378572 WDR4P57081 412 aaKnown RBP13.22□□□□□ -0.29
PRPF18-202ENST00000378572 IRF9Q00978 393 aa13.22□□□□□ -0.29
PRPF18-202ENST00000378572 FAM83EQ2M2I3 478 aa13.22□□□□□ -0.29
PRPF18-202ENST00000378572 FHL5Q5TD97 284 aa13.22□□□□□ -0.29
PRPF18-202ENST00000378572 TRIM73Q86UV7 250 aa13.22□□□□□ -0.29
PRPF18-202ENST00000378572 RAB43Q86YS6 212 aa13.22□□□□□ -0.29
PRPF18-202ENST00000378572 PLD6Q8N2A8 252 aaKnown RBP13.22□□□□□ -0.29
PRPF18-202ENST00000378572 CLDN19Q8N6F1 224 aa13.22□□□□□ -0.29
PRPF18-202ENST00000378572 ANKRD42Q8N9B4 389 aa13.22□□□□□ -0.29
PRPF18-202ENST00000378572 CD200R1Q8TD46 325 aa13.22□□□□□ -0.29
PRPF18-202ENST00000378572 TFGQ92734 400 aaPredicted RBP13.22□□□□□ -0.29
PRPF18-202ENST00000378572 NRTNQ99748 197 aa13.22□□□□□ -0.29
PRPF18-202ENST00000378572 TSSK1BQ9BXA7 367 aa13.22□□□□□ -0.29
PRPF18-202ENST00000378572 OR52A5Q9H2C5 316 aa13.22□□□□□ -0.29
PRPF18-202ENST00000378572 TDRKHQ9Y2W6 561 aaKnown RBP13.22□□□□□ -0.29
PRPF18-202ENST00000378572 PCDHGA9Q9Y5G4 932 aaKnown RBP13.22□□□□□ -0.29
PRPF18-202ENST00000378572 RELNP78509 3460 aa13.22□□□□□ -0.29
PRPF18-202ENST00000378572 EIF3FO00303 357 aaPredicted RBP13.22□□□□□ -0.29
PRPF18-202ENST00000378572 PLIN3O60664 434 aa13.22□□□□□ -0.29
PRPF18-202ENST00000378572 DPM1O60762 260 aa13.22□□□□□ -0.29
PRPF18-202ENST00000378572 LTA4HP09960 611 aaKnown RBP13.22□□□□□ -0.29
PRPF18-202ENST00000378572 CHRM3P20309 590 aa13.22□□□□□ -0.29
PRPF18-202ENST00000378572 GYS2P54840 703 aa13.22□□□□□ -0.29
PRPF18-202ENST00000378572 RRADP55042 308 aa13.22□□□□□ -0.29
PRPF18-202ENST00000378572 ATP1A4Q13733 1029 aa13.22□□□□□ -0.29
PRPF18-202ENST00000378572 BOP1Q14137 746 aaKnown RBP13.22□□□□□ -0.29
PRPF18-202ENST00000378572 NCF4Q15080 339 aa13.22□□□□□ -0.29
PRPF18-202ENST00000378572 DEFB110Q30KQ9 67 aa13.22□□□□□ -0.29
PRPF18-202ENST00000378572 C1orf189Q5VU69 101 aa13.22□□□□□ -0.29
PRPF18-202ENST00000378572 MLIPQ5VWP3 458 aa13.22□□□□□ -0.29
PRPF18-202ENST00000378572 FAM198BQ6UWH4 519 aa13.22□□□□□ -0.29
PRPF18-202ENST00000378572 TMEM207Q6UWW9 146 aa13.22□□□□□ -0.29
PRPF18-202ENST00000378572 NKAPQ8N5F7 415 aaKnown RBP13.22□□□□□ -0.29
PRPF18-202ENST00000378572 KCTD4Q8WVF5 259 aa13.22□□□□□ -0.29
PRPF18-202ENST00000378572 ELMO1Q92556 727 aa13.22□□□□□ -0.29
PRPF18-202ENST00000378572 INPP5DQ92835 1189 aa13.22□□□□□ -0.29
PRPF18-202ENST00000378572 PDLIM5Q96HC4 596 aaKnown RBP13.22□□□□□ -0.29
PRPF18-202ENST00000378572 GPR78Q96P69 363 aa13.22□□□□□ -0.29
PRPF18-202ENST00000378572 FAM111AQ96PZ2 611 aa13.22□□□□□ -0.29
PRPF18-202ENST00000378572 TRAPPC9Q96Q05 1148 aa13.22□□□□□ -0.29
PRPF18-202ENST00000378572 CCDC134Q9H6E4 229 aa13.22□□□□□ -0.29
PRPF18-202ENST00000378572 GPR83Q9NYM4 423 aa13.22□□□□□ -0.29
PRPF18-202ENST00000378572 TMEM216Q9P0N5 145 aa13.22□□□□□ -0.29
PRPF18-202ENST00000378572 SLC17A7Q9P2U7 560 aa13.22□□□□□ -0.29
PRPF18-202ENST00000378572 MID2Q9UJV3 735 aa13.22□□□□□ -0.29
PRPF18-202ENST00000378572 EMCNQ9ULC0 261 aa13.22□□□□□ -0.29
PRPF18-202ENST00000378572 ASF1AQ9Y294 204 aa13.22□□□□□ -0.29
PRPF18-202ENST00000378572 KPNA5O15131 536 aa13.21□□□□□ -0.3
PRPF18-202ENST00000378572 ZNF749O43361 778 aa13.21□□□□□ -0.3
PRPF18-202ENST00000378572 PROCP04070 461 aa13.21□□□□□ -0.3
PRPF18-202ENST00000378572 HBQ1P09105 142 aa13.21□□□□□ -0.3
PRPF18-202ENST00000378572 GSTM1P09488 218 aa13.21□□□□□ -0.3
PRPF18-202ENST00000378572 RORAP35398 523 aa13.21□□□□□ -0.3
PRPF18-202ENST00000378572 GSTM4Q03013 218 aa13.21□□□□□ -0.3
PRPF18-202ENST00000378572 RPA4Q13156 261 aa13.21□□□□□ -0.3
PRPF18-202ENST00000378572 HHATQ5VTY9 493 aa13.21□□□□□ -0.3
PRPF18-202ENST00000378572 PAQR3Q6TCH7 311 aa13.21□□□□□ -0.3
PRPF18-202ENST00000378572 SPESP1Q6UW49 350 aa13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms