RNA–Protein interactions for RNA: ENST00000377575.2

HMGN4-201, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN4, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-201ENST00000377575 PHACTR1Q9C0D0 580 aa16.06■□□□□ 0.16
HMGN4-201ENST00000377575 SAYSD1Q9NPB0 183 aa16.06■□□□□ 0.16
HMGN4-201ENST00000377575 CUEDC1Q9NWM3 386 aaPredicted RBP16.06■□□□□ 0.16
HMGN4-201ENST00000377575 PCDHGB7Q9Y5F8 929 aa16.06■□□□□ 0.16
HMGN4-201ENST00000377575 PSAT1Q9Y617 370 aa16.06■□□□□ 0.16
HMGN4-201ENST00000377575 FAM95CA0A1B0GW59 222 aa16.05■□□□□ 0.16
HMGN4-201ENST00000377575 HAT1O14929 419 aa16.05■□□□□ 0.16
HMGN4-201ENST00000377575 PRPF4O43172 522 aaKnown RBP eCLIP16.05■□□□□ 0.16
HMGN4-201ENST00000377575 CEACAM4O75871 244 aa16.05■□□□□ 0.16
HMGN4-201ENST00000377575 UMODP07911 640 aa16.05■□□□□ 0.16
HMGN4-201ENST00000377575 ZNF37AP17032 561 aaPredicted RBP16.05■□□□□ 0.16
HMGN4-201ENST00000377575 OR1D4P47884 311 aa16.05■□□□□ 0.16
HMGN4-201ENST00000377575 NKG7Q16617 165 aa16.05■□□□□ 0.16
HMGN4-201ENST00000377575 PHKG1Q16816 387 aa16.05■□□□□ 0.16
HMGN4-201ENST00000377575 PRTGQ2VWP7 1150 aa16.05■□□□□ 0.16
HMGN4-201ENST00000377575 GARNL3Q5VVW2 1013 aa16.05■□□□□ 0.16
HMGN4-201ENST00000377575 MBOAT1Q6ZNC8 495 aa16.05■□□□□ 0.16
HMGN4-201ENST00000377575 CAPN12Q6ZSI9 719 aa16.05■□□□□ 0.16
HMGN4-201ENST00000377575 TEX19Q8NA77 164 aa16.05■□□□□ 0.16
HMGN4-201ENST00000377575 CLEC1AQ8NC01 280 aa16.05■□□□□ 0.16
HMGN4-201ENST00000377575 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.05■□□□□ 0.16
HMGN4-201ENST00000377575 ATL1Q8WXF7 558 aa16.05■□□□□ 0.16
HMGN4-201ENST00000377575 COL26A1Q96A83 441 aa16.05■□□□□ 0.16
HMGN4-201ENST00000377575 MVB12AQ96EY5 273 aa16.05■□□□□ 0.16
HMGN4-201ENST00000377575 C10orf90Q96M02 699 aa16.05■□□□□ 0.16
HMGN4-201ENST00000377575 OR2A5Q96R48 311 aa16.05■□□□□ 0.16
HMGN4-201ENST00000377575 TRIM4Q9C037 500 aa16.05■□□□□ 0.16
HMGN4-201ENST00000377575 RHOJQ9H4E5 214 aa16.05■□□□□ 0.16
HMGN4-201ENST00000377575 ZNF304Q9HCX3 659 aa16.05■□□□□ 0.16
HMGN4-201ENST00000377575 TMEM184CQ9NVA4 438 aa16.05■□□□□ 0.16
HMGN4-201ENST00000377575 ARL15Q9NXU5 204 aa16.05■□□□□ 0.16
HMGN4-201ENST00000377575 GRHL1Q9NZI5 618 aa16.05■□□□□ 0.16
HMGN4-201ENST00000377575 CTSFQ9UBX1 484 aa16.05■□□□□ 0.16
HMGN4-201ENST00000377575 CDC14AQ9UNH5 594 aa16.05■□□□□ 0.16
HMGN4-201ENST00000377575 RUVBL1Q9Y265 456 aaKnown RBP16.05■□□□□ 0.16
HMGN4-201ENST00000377575 ZNF451Q9Y4E5 1061 aa16.05■□□□□ 0.16
HMGN4-201ENST00000377575 MAU2Q9Y6X3 613 aa16.05■□□□□ 0.16
HMGN4-201ENST00000377575 H7BY64 318 aa16.04■□□□□ 0.16
HMGN4-201ENST00000377575 K7EM74 188 aa16.04■□□□□ 0.16
HMGN4-201ENST00000377575 SAT1P21673 171 aa16.04■□□□□ 0.16
HMGN4-201ENST00000377575 FBLP22087 321 aaKnown RBP16.04■□□□□ 0.16
HMGN4-201ENST00000377575 RPS15AP62244 130 aaKnown RBP16.04■□□□□ 0.16
HMGN4-201ENST00000377575 OCA2Q04671 838 aa16.04■□□□□ 0.16
HMGN4-201ENST00000377575 TLE1Q04724 770 aa16.04■□□□□ 0.16
HMGN4-201ENST00000377575 NAE1Q13564 534 aa16.04■□□□□ 0.16
HMGN4-201ENST00000377575 CAPN13Q6MZZ7 669 aaPredicted RBP16.04■□□□□ 0.16
HMGN4-201ENST00000377575 LCTLQ6UWM7 567 aa16.04■□□□□ 0.16
HMGN4-201ENST00000377575 PPP1R32Q7Z5V6 425 aa16.04■□□□□ 0.16
HMGN4-201ENST00000377575 C17orf64Q86WR6 236 aa16.04■□□□□ 0.16
HMGN4-201ENST00000377575 NKAPQ8N5F7 415 aaKnown RBP16.04■□□□□ 0.16
HMGN4-201ENST00000377575 PDLIM5Q96HC4 596 aaKnown RBP16.04■□□□□ 0.16
HMGN4-201ENST00000377575 VPS39Q96JC1 886 aa16.04■□□□□ 0.16
HMGN4-201ENST00000377575 VPS50Q96JG6 964 aa16.04■□□□□ 0.16
HMGN4-201ENST00000377575 C16orf45Q96MC5 204 aaPredicted RBP16.04■□□□□ 0.16
HMGN4-201ENST00000377575 PRAP1Q96NZ9 151 aa16.04■□□□□ 0.16
HMGN4-201ENST00000377575 SPSB2Q99619 263 aa16.04■□□□□ 0.16
HMGN4-201ENST00000377575 HAUS8Q9BT25 410 aa16.04■□□□□ 0.16
HMGN4-201ENST00000377575 ATG10Q9H0Y0 220 aa16.04■□□□□ 0.16
HMGN4-201ENST00000377575 EPN3Q9H201 632 aa16.04■□□□□ 0.16
HMGN4-201ENST00000377575 P4HTMQ9NXG6 502 aa16.04■□□□□ 0.16
HMGN4-201ENST00000377575 GPR83Q9NYM4 423 aa16.04■□□□□ 0.16
HMGN4-201ENST00000377575 TXNDC16Q9P2K2 825 aa16.04■□□□□ 0.16
HMGN4-201ENST00000377575 ZNF282Q9UDV7 671 aaPredicted RBP16.04■□□□□ 0.16
HMGN4-201ENST00000377575 CDC23Q9UJX2 597 aa16.04■□□□□ 0.16
HMGN4-201ENST00000377575 TENM4Q6N022 2769 aa16.04■□□□□ 0.16
HMGN4-201ENST00000377575 AGPSO00116 658 aa16.03■□□□□ 0.16
HMGN4-201ENST00000377575 KLHL41O60662 606 aa16.03■□□□□ 0.16
HMGN4-201ENST00000377575 WISP1O95388 367 aa16.03■□□□□ 0.16
HMGN4-201ENST00000377575 MED26O95402 600 aa16.03■□□□□ 0.16
HMGN4-201ENST00000377575 ANXA5P08758 320 aa16.03■□□□□ 0.16
HMGN4-201ENST00000377575 GSTA2P09210 222 aa16.03■□□□□ 0.16
HMGN4-201ENST00000377575 MMP11P24347 488 aa16.03■□□□□ 0.16
HMGN4-201ENST00000377575 GRK3P35626 688 aa16.03■□□□□ 0.16
HMGN4-201ENST00000377575 FOXL2P58012 376 aa16.03■□□□□ 0.16
HMGN4-201ENST00000377575 NDUFA9Q16795 377 aa16.03■□□□□ 0.16
HMGN4-201ENST00000377575 HKDC1Q2TB90 917 aa16.03■□□□□ 0.16
HMGN4-201ENST00000377575 DCAF10Q5QP82 559 aa16.03■□□□□ 0.16
HMGN4-201ENST00000377575 HPS6Q86YV9 775 aa16.03■□□□□ 0.16
HMGN4-201ENST00000377575 FDCSPQ8NFU4 85 aa16.03■□□□□ 0.16
HMGN4-201ENST00000377575 ANKRD7Q92527 254 aa16.03■□□□□ 0.16
HMGN4-201ENST00000377575 ALKBH8Q96BT7 664 aaKnown RBP16.03■□□□□ 0.16
HMGN4-201ENST00000377575 THAP11Q96EK4 314 aa16.03■□□□□ 0.16
HMGN4-201ENST00000377575 SGPP1Q9BX95 441 aa16.03■□□□□ 0.16
HMGN4-201ENST00000377575 SOX17Q9H6I2 414 aaPredicted RBP16.03■□□□□ 0.16
HMGN4-201ENST00000377575 POPDC3Q9HBV1 291 aa16.03■□□□□ 0.16
HMGN4-201ENST00000377575 MLXIPLQ9NP71 852 aa16.03■□□□□ 0.16
HMGN4-201ENST00000377575 SEMA3GQ9NS98 782 aa16.03■□□□□ 0.16
HMGN4-201ENST00000377575 NOVA2Q9UNW9 492 aaKnown RBP16.03■□□□□ 0.16
HMGN4-201ENST00000377575 SPENQ96T58 3664 aaKnown RBP16.03■□□□□ 0.16
HMGN4-201ENST00000377575 A6NL46 340 aa16.02■□□□□ 0.16
HMGN4-201ENST00000377575 VSTM2BA6NLU5 285 aa16.02■□□□□ 0.16
HMGN4-201ENST00000377575 PYCARD-AS1I3L0S3 204 aa16.02■□□□□ 0.16
HMGN4-201ENST00000377575 PDGFAP04085 211 aa16.02■□□□□ 0.16
HMGN4-201ENST00000377575 SSTR1P30872 391 aa16.02■□□□□ 0.16
HMGN4-201ENST00000377575 CSRP3P50461 194 aa16.02■□□□□ 0.16
HMGN4-201ENST00000377575 PGGT1BP53609 377 aa16.02■□□□□ 0.16
HMGN4-201ENST00000377575 SLC12A2P55011 1212 aa16.02■□□□□ 0.16
HMGN4-201ENST00000377575 PLTPP55058 493 aa16.02■□□□□ 0.16
HMGN4-201ENST00000377575 DSG2Q14126 1118 aa16.02■□□□□ 0.16
HMGN4-201ENST00000377575 C8orf74Q6P047 294 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms