RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 LYARQ9NX58 379 aaKnown RBP13.96□□□□□ -0.17
TRAF1-201ENST00000373887 DTLQ9NZJ0 730 aa13.96□□□□□ -0.17
TRAF1-201ENST00000373887 NOCTQ9UK39 431 aaKnown RBP13.96□□□□□ -0.17
TRAF1-201ENST00000373887 TCRBV21S2A2A0A5A6 115 aa13.96□□□□□ -0.17
TRAF1-201ENST00000373887 TRIM64BA6NI03 449 aa13.96□□□□□ -0.17
TRAF1-201ENST00000373887 UBXN7O94888 489 aa13.96□□□□□ -0.17
TRAF1-201ENST00000373887 ASLP04424 464 aa13.96□□□□□ -0.17
TRAF1-201ENST00000373887 MSL3P1P0C860 447 aa13.96□□□□□ -0.17
TRAF1-201ENST00000373887 HK1P19367 917 aa13.96□□□□□ -0.17
TRAF1-201ENST00000373887 AFF1P51825 1210 aaKnown RBP13.96□□□□□ -0.17
TRAF1-201ENST00000373887 C1QTNF8P60827 252 aa13.96□□□□□ -0.17
TRAF1-201ENST00000373887 P4HA3Q7Z4N8 544 aa13.96□□□□□ -0.17
TRAF1-201ENST00000373887 TMEM145Q8NBT3 493 aa13.96□□□□□ -0.17
TRAF1-201ENST00000373887 CD300LFQ8TDQ1 290 aa13.96□□□□□ -0.17
TRAF1-201ENST00000373887 SPATA6Q9NWH7 488 aaPredicted RBP13.96□□□□□ -0.17
TRAF1-201ENST00000373887 CALML5Q9NZT1 146 aa13.96□□□□□ -0.17
TRAF1-201ENST00000373887 HS3ST4Q9Y661 456 aa13.96□□□□□ -0.17
TRAF1-201ENST00000373887 ZNF726A6NNF4 738 aa13.96□□□□□ -0.17
TRAF1-201ENST00000373887 LCP2Q13094 533 aa13.96□□□□□ -0.17
TRAF1-201ENST00000373887 KLHL22Q53GT1 634 aa13.96□□□□□ -0.17
TRAF1-201ENST00000373887 MLIPQ5VWP3 458 aa13.96□□□□□ -0.17
TRAF1-201ENST00000373887 KCNK6Q9Y257 313 aa13.96□□□□□ -0.17
TRAF1-201ENST00000373887 SSX5O60225 188 aa13.96□□□□□ -0.18
TRAF1-201ENST00000373887 KLF8O95600 359 aaPredicted RBP13.96□□□□□ -0.18
TRAF1-201ENST00000373887 VARSP26640 1264 aaKnown RBP13.96□□□□□ -0.18
TRAF1-201ENST00000373887 ALG10Q5BKT4 473 aa13.96□□□□□ -0.18
TRAF1-201ENST00000373887 LYSMD3Q7Z3D4 306 aa13.96□□□□□ -0.18
TRAF1-201ENST00000373887 CCDC107Q8WV48 283 aa13.96□□□□□ -0.18
TRAF1-201ENST00000373887 RPL26L1Q9UNX3 145 aaKnown RBP13.96□□□□□ -0.18
TRAF1-201ENST00000373887 H3BNX3 289 aa13.96□□□□□ -0.18
TRAF1-201ENST00000373887 KHNYNO15037 678 aaKnown RBP13.96□□□□□ -0.18
TRAF1-201ENST00000373887 RBM34P42696 430 aaKnown RBP13.96□□□□□ -0.18
TRAF1-201ENST00000373887 SLC1A2P43004 574 aa13.96□□□□□ -0.18
TRAF1-201ENST00000373887 KCNJ5P48544 419 aa13.96□□□□□ -0.18
TRAF1-201ENST00000373887 GRK1Q15835 563 aa13.96□□□□□ -0.18
TRAF1-201ENST00000373887 CERS6Q6ZMG9 384 aa13.96□□□□□ -0.18
TRAF1-201ENST00000373887 CYP2U1Q7Z449 544 aa13.96□□□□□ -0.18
TRAF1-201ENST00000373887 TMED4Q7Z7H5 227 aa13.96□□□□□ -0.18
TRAF1-201ENST00000373887 TMEM17Q86X19 198 aa13.96□□□□□ -0.18
TRAF1-201ENST00000373887 PNLDC1Q8NA58 520 aaKnown RBP13.96□□□□□ -0.18
TRAF1-201ENST00000373887 OR5M3Q8NGP4 307 aa13.96□□□□□ -0.18
TRAF1-201ENST00000373887 HCAR2Q8TDS4 363 aa13.96□□□□□ -0.18
TRAF1-201ENST00000373887 SLC22A4Q9H015 551 aa13.96□□□□□ -0.18
TRAF1-201ENST00000373887 HIF3AQ9Y2N7 669 aa13.96□□□□□ -0.18
TRAF1-201ENST00000373887 SQORQ9Y6N5 450 aa13.96□□□□□ -0.18
TRAF1-201ENST00000373887 MEN1O00255 615 aa13.95□□□□□ -0.18
TRAF1-201ENST00000373887 KAT7O95251 611 aa13.95□□□□□ -0.18
TRAF1-201ENST00000373887 CLDN7O95471 211 aa13.95□□□□□ -0.18
TRAF1-201ENST00000373887 F2P00734 622 aa13.95□□□□□ -0.18
TRAF1-201ENST00000373887 GPIP06744 558 aa13.95□□□□□ -0.18
TRAF1-201ENST00000373887 CD36P16671 472 aa13.95□□□□□ -0.18
TRAF1-201ENST00000373887 CSTF2P33240 577 aaKnown RBP eCLIP13.95□□□□□ -0.18
TRAF1-201ENST00000373887 CLCN4P51793 760 aa13.95□□□□□ -0.18
TRAF1-201ENST00000373887 SLC3A1Q07837 685 aa13.95□□□□□ -0.18
TRAF1-201ENST00000373887 SCARB2Q14108 478 aa13.95□□□□□ -0.18
TRAF1-201ENST00000373887 DSG2Q14126 1118 aa13.95□□□□□ -0.18
TRAF1-201ENST00000373887 METTL21CQ5VZV1 264 aa13.95□□□□□ -0.18
TRAF1-201ENST00000373887 ANKRD26P1Q6NSI1 321 aa13.95□□□□□ -0.18
TRAF1-201ENST00000373887 KCTD9Q7L273 389 aa13.95□□□□□ -0.18
TRAF1-201ENST00000373887 ACOT12Q8WYK0 555 aa13.95□□□□□ -0.18
TRAF1-201ENST00000373887 ADAD1Q96M93 576 aaKnown RBP13.95□□□□□ -0.18
TRAF1-201ENST00000373887 RAD9AQ99638 391 aa13.95□□□□□ -0.18
TRAF1-201ENST00000373887 MKKSQ9NPJ1 570 aaPredicted RBP13.95□□□□□ -0.18
TRAF1-201ENST00000373887 MTMR11A4FU01 709 aa13.95□□□□□ -0.18
TRAF1-201ENST00000373887 IFNA21P01568 189 aa13.95□□□□□ -0.18
TRAF1-201ENST00000373887 RFC2P35250 354 aa13.95□□□□□ -0.18
TRAF1-201ENST00000373887 BDKRB1P46663 353 aa13.95□□□□□ -0.18
TRAF1-201ENST00000373887 CDKN1CP49918 316 aaPredicted RBP13.95□□□□□ -0.18
TRAF1-201ENST00000373887 CLCNKAP51800 687 aa13.95□□□□□ -0.18
TRAF1-201ENST00000373887 XKP51811 444 aa13.95□□□□□ -0.18
TRAF1-201ENST00000373887 LY6G5CQ5SRR4 150 aa13.95□□□□□ -0.18
TRAF1-201ENST00000373887 SNX29P2Q8IUI4 249 aa13.95□□□□□ -0.18
TRAF1-201ENST00000373887 CNDP2Q96KP4 475 aaKnown RBP13.95□□□□□ -0.18
TRAF1-201ENST00000373887 SEC61A2Q9H9S3 476 aa13.95□□□□□ -0.18
TRAF1-201ENST00000373887 SMURF2Q9HAU4 748 aa13.95□□□□□ -0.18
TRAF1-201ENST00000373887 SALL4Q9UJQ4 1053 aa13.95□□□□□ -0.18
TRAF1-201ENST00000373887 NOX1Q9Y5S8 564 aa13.95□□□□□ -0.18
TRAF1-201ENST00000373887 COL1A1P02452 1464 aaPredicted RBP13.95□□□□□ -0.18
TRAF1-201ENST00000373887 PCDHGA12O60330 932 aa13.95□□□□□ -0.18
TRAF1-201ENST00000373887 ARPC4P59998 168 aa13.95□□□□□ -0.18
TRAF1-201ENST00000373887 PLGLB1Q02325 96 aa13.95□□□□□ -0.18
TRAF1-201ENST00000373887 IQCCQ4KMZ1 466 aa13.95□□□□□ -0.18
TRAF1-201ENST00000373887 EIPR1Q53HC9 387 aa13.95□□□□□ -0.18
TRAF1-201ENST00000373887 PRPF38BQ5VTL8 546 aaKnown RBP13.95□□□□□ -0.18
TRAF1-201ENST00000373887 OR5AK3PQ8NH89 298 aa13.95□□□□□ -0.18
TRAF1-201ENST00000373887 NCSTNQ92542 709 aa13.95□□□□□ -0.18
TRAF1-201ENST00000373887 ZNF142P52746 1687 aaPredicted RBP13.95□□□□□ -0.18
TRAF1-201ENST00000373887 ITGA10O75578 1167 aa13.95□□□□□ -0.18
TRAF1-201ENST00000373887 PRKD3O94806 890 aa13.95□□□□□ -0.18
TRAF1-201ENST00000373887 TYRP1P17643 537 aa13.95□□□□□ -0.18
TRAF1-201ENST00000373887 SLC7A1P30825 629 aa13.95□□□□□ -0.18
TRAF1-201ENST00000373887 FSTL4Q6MZW2 842 aa13.95□□□□□ -0.18
TRAF1-201ENST00000373887 PAQR7Q86WK9 346 aa13.95□□□□□ -0.18
TRAF1-201ENST00000373887 MARCH9Q86YJ5 346 aa13.95□□□□□ -0.18
TRAF1-201ENST00000373887 MPP5Q8N3R9 675 aa13.95□□□□□ -0.18
TRAF1-201ENST00000373887 TOMM5Q8N4H5 51 aa13.95□□□□□ -0.18
TRAF1-201ENST00000373887 CNTD1Q8N815 330 aa13.95□□□□□ -0.18
TRAF1-201ENST00000373887 VNN3Q9NY84 501 aa13.95□□□□□ -0.18
TRAF1-201ENST00000373887 SOD2P04179 222 aa13.95□□□□□ -0.18
TRAF1-201ENST00000373887 ZNF3P17036 446 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms