RNA–Protein interactions for RNA: ENST00000373327.4

TRAF3IP1-201, Transcript of TRAF3 interacting protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRAF3IP1, Length 4,279 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-201ENST00000373327 TRIM39Q9HCM9 518 aa17.14■□□□□ 0.33
TRAF3IP1-201ENST00000373327 PRDM8Q9NQV8 689 aa17.14■□□□□ 0.33
TRAF3IP1-201ENST00000373327 ITM2CQ9NQX7 267 aa17.14■□□□□ 0.33
TRAF3IP1-201ENST00000373327 THUMPD1Q9NXG2 353 aaKnown RBP17.14■□□□□ 0.33
TRAF3IP1-201ENST00000373327 ERVK-18Q9QC07 812 aa17.14■□□□□ 0.33
TRAF3IP1-201ENST00000373327 FBXW2Q9UKT8 454 aa17.14■□□□□ 0.33
TRAF3IP1-201ENST00000373327 RBBP6Q7Z6E9 1792 aaKnown RBP17.13■□□□□ 0.33
TRAF3IP1-201ENST00000373327 ACP5P13686 325 aa17.13■□□□□ 0.33
TRAF3IP1-201ENST00000373327 C2orf27AQ580R0 203 aa17.13■□□□□ 0.33
TRAF3IP1-201ENST00000373327 HACD2Q6Y1H2 254 aa17.13■□□□□ 0.33
TRAF3IP1-201ENST00000373327 FLCNQ8NFG4 579 aa17.13■□□□□ 0.33
TRAF3IP1-201ENST00000373327 JPH3Q8WXH2 748 aaPredicted RBP17.13■□□□□ 0.33
TRAF3IP1-201ENST00000373327 COPS4Q9BT78 406 aa17.13■□□□□ 0.33
TRAF3IP1-201ENST00000373327 SEZ6LQ9BYH1 1024 aa17.13■□□□□ 0.33
TRAF3IP1-201ENST00000373327 GIMAP4Q9NUV9 329 aa17.13■□□□□ 0.33
TRAF3IP1-201ENST00000373327 H2AFY2Q9P0M6 372 aaPredicted RBP17.13■□□□□ 0.33
TRAF3IP1-201ENST00000373327 SRSF11Q05519 484 aaKnown RBP17.13■□□□□ 0.33
TRAF3IP1-201ENST00000373327 RFX4Q33E94 735 aa17.13■□□□□ 0.33
TRAF3IP1-201ENST00000373327 CNKSR3Q6P9H4 555 aa17.13■□□□□ 0.33
TRAF3IP1-201ENST00000373327 SNX29P2Q8IUI4 249 aa17.13■□□□□ 0.33
TRAF3IP1-201ENST00000373327 SCRN2Q96FV2 425 aa17.13■□□□□ 0.33
TRAF3IP1-201ENST00000373327 TRMT61BQ9BVS5 477 aaKnown RBP17.13■□□□□ 0.33
TRAF3IP1-201ENST00000373327 ANKRD60Q9BZ19 345 aa17.13■□□□□ 0.33
TRAF3IP1-201ENST00000373327 ELAC1Q9H777 363 aaKnown RBP17.13■□□□□ 0.33
TRAF3IP1-201ENST00000373327 CD300AQ9UGN4 299 aa17.13■□□□□ 0.33
TRAF3IP1-201ENST00000373327 TET1Q8NFU7 2136 aa17.13■□□□□ 0.33
TRAF3IP1-201ENST00000373327 WDR81Q562E7 1941 aa17.13■□□□□ 0.33
TRAF3IP1-201ENST00000373327 TMX2-CTNND1H3BSU7 103 aa17.13■□□□□ 0.33
TRAF3IP1-201ENST00000373327 INMTO95050 263 aa17.13■□□□□ 0.33
TRAF3IP1-201ENST00000373327 RHOP08100 348 aa17.13■□□□□ 0.33
TRAF3IP1-201ENST00000373327 CLTBP09497 229 aa17.13■□□□□ 0.33
TRAF3IP1-201ENST00000373327 SPINT3P49223 89 aa17.13■□□□□ 0.33
TRAF3IP1-201ENST00000373327 CTSCP53634 463 aa17.13■□□□□ 0.33
TRAF3IP1-201ENST00000373327 CD47Q08722 323 aa17.13■□□□□ 0.33
TRAF3IP1-201ENST00000373327 GCNT6Q5T4J0 391 aa17.13■□□□□ 0.33
TRAF3IP1-201ENST00000373327 MTSS1LQ765P7 747 aa17.13■□□□□ 0.33
TRAF3IP1-201ENST00000373327 HSD11B1LQ7Z5J1 315 aa17.13■□□□□ 0.33
TRAF3IP1-201ENST00000373327 TICAM1Q8IUC6 712 aa17.13■□□□□ 0.33
TRAF3IP1-201ENST00000373327 XKR8Q9H6D3 395 aa17.13■□□□□ 0.33
TRAF3IP1-201ENST00000373327 ARMC1Q9NVT9 282 aa17.13■□□□□ 0.33
TRAF3IP1-201ENST00000373327 IL36AQ9UHA7 158 aa17.13■□□□□ 0.33
TRAF3IP1-201ENST00000373327 MICAL3Q7RTP6 2002 aa17.13■□□□□ 0.33
TRAF3IP1-201ENST00000373327 FXYD1O00168 92 aa17.13■□□□□ 0.33
TRAF3IP1-201ENST00000373327 SLC9A3R1O14745 358 aaPredicted RBP17.13■□□□□ 0.33
TRAF3IP1-201ENST00000373327 FGBP02675 491 aa17.13■□□□□ 0.33
TRAF3IP1-201ENST00000373327 PDHA2P29803 388 aa17.13■□□□□ 0.33
TRAF3IP1-201ENST00000373327 DUOXA1Q1HG43 343 aa17.13■□□□□ 0.33
TRAF3IP1-201ENST00000373327 C6orf141Q5SZD1 244 aa17.13■□□□□ 0.33
TRAF3IP1-201ENST00000373327 UBE2J2Q8N2K1 259 aa17.13■□□□□ 0.33
TRAF3IP1-201ENST00000373327 POF1BQ8WVV4 589 aa17.13■□□□□ 0.33
TRAF3IP1-201ENST00000373327 POLE4Q9NR33 117 aa17.13■□□□□ 0.33
TRAF3IP1-201ENST00000373327 SEC14L3Q9UDX4 400 aa17.13■□□□□ 0.33
TRAF3IP1-201ENST00000373327 TBC1D3DA0A087WVF3 549 aa17.12■□□□□ 0.33
TRAF3IP1-201ENST00000373327 TBC1D3IA0A087WXS9 549 aa17.12■□□□□ 0.33
TRAF3IP1-201ENST00000373327 TBC1D3EA0A087X179 549 aa17.12■□□□□ 0.33
TRAF3IP1-201ENST00000373327 TBC1D3KA0A087X1G2 549 aa17.12■□□□□ 0.33
TRAF3IP1-201ENST00000373327 TBC1D3FA6NER0 549 aaPredicted RBP17.12■□□□□ 0.33
TRAF3IP1-201ENST00000373327 TBC1D3LB9A6J9 549 aa17.12■□□□□ 0.33
TRAF3IP1-201ENST00000373327 TBC1D3HP0C7X1 549 aa17.12■□□□□ 0.33
TRAF3IP1-201ENST00000373327 RNF144AP50876 292 aaPredicted RBP17.12■□□□□ 0.33
TRAF3IP1-201ENST00000373327 RPS3AP61247 264 aaKnown RBP17.12■□□□□ 0.33
TRAF3IP1-201ENST00000373327 INAQ16352 499 aa17.12■□□□□ 0.33
TRAF3IP1-201ENST00000373327 TJAP1Q5JTD0 557 aa17.12■□□□□ 0.33
TRAF3IP1-201ENST00000373327 CATSPEREQ5SY80 951 aa17.12■□□□□ 0.33
TRAF3IP1-201ENST00000373327 ANXA8L1Q5VT79 327 aa17.12■□□□□ 0.33
TRAF3IP1-201ENST00000373327 AFMIDQ63HM1 303 aa17.12■□□□□ 0.33
TRAF3IP1-201ENST00000373327 TBC1D3GQ6DHY5 549 aa17.12■□□□□ 0.33
TRAF3IP1-201ENST00000373327 TBC1D3CQ6IPX1 549 aa17.12■□□□□ 0.33
TRAF3IP1-201ENST00000373327 CYP4Z1Q86W10 505 aa17.12■□□□□ 0.33
TRAF3IP1-201ENST00000373327 FAM129CQ86XR2 697 aa17.12■□□□□ 0.33
TRAF3IP1-201ENST00000373327 TMEM126BQ8IUX1 230 aa17.12■□□□□ 0.33
TRAF3IP1-201ENST00000373327 TBC1D3Q8IZP1 549 aaPredicted RBP17.12■□□□□ 0.33
TRAF3IP1-201ENST00000373327 SGCDQ92629 289 aa17.12■□□□□ 0.33
TRAF3IP1-201ENST00000373327 EHD3Q9NZN3 535 aa17.12■□□□□ 0.33
TRAF3IP1-201ENST00000373327 ANGPT4Q9Y264 503 aa17.12■□□□□ 0.33
TRAF3IP1-201ENST00000373327 APOL3O95236 402 aa17.12■□□□□ 0.33
TRAF3IP1-201ENST00000373327 MC1RQ01726 317 aa17.12■□□□□ 0.33
TRAF3IP1-201ENST00000373327 ABHD18Q0P651 414 aa17.12■□□□□ 0.33
TRAF3IP1-201ENST00000373327 TOP3AQ13472 1001 aaPredicted RBP17.12■□□□□ 0.33
TRAF3IP1-201ENST00000373327 IRF5Q13568 498 aa17.12■□□□□ 0.33
TRAF3IP1-201ENST00000373327 ART5Q96L15 291 aa17.12■□□□□ 0.33
TRAF3IP1-201ENST00000373327 SORBS1Q9BX66 1292 aaKnown RBP17.12■□□□□ 0.33
TRAF3IP1-201ENST00000373327 FAM118AQ9NWS6 357 aa17.12■□□□□ 0.33
TRAF3IP1-201ENST00000373327 KLHL20Q9Y2M5 609 aa17.12■□□□□ 0.33
TRAF3IP1-201ENST00000373327 PCDHGA8Q9Y5G5 932 aa17.12■□□□□ 0.33
TRAF3IP1-201ENST00000373327 PCDHA9Q9Y5H5 950 aa17.12■□□□□ 0.33
TRAF3IP1-201ENST00000373327 BACE2Q9Y5Z0 518 aa17.12■□□□□ 0.33
TRAF3IP1-201ENST00000373327 A0A1W2PRB8 838 aa17.12■□□□□ 0.33
TRAF3IP1-201ENST00000373327 ETFAP13804 333 aa17.12■□□□□ 0.33
TRAF3IP1-201ENST00000373327 CD36P16671 472 aa17.12■□□□□ 0.33
TRAF3IP1-201ENST00000373327 SDC1P18827 310 aa17.12■□□□□ 0.33
TRAF3IP1-201ENST00000373327 GGT1P19440 569 aa17.12■□□□□ 0.33
TRAF3IP1-201ENST00000373327 SHMT2P34897 504 aa17.12■□□□□ 0.33
TRAF3IP1-201ENST00000373327 CDC42P60953 191 aa17.12■□□□□ 0.33
TRAF3IP1-201ENST00000373327 NHSL2Q5HYW2 709 aa17.12■□□□□ 0.33
TRAF3IP1-201ENST00000373327 WDR36Q8NI36 951 aaKnown RBP17.12■□□□□ 0.33
TRAF3IP1-201ENST00000373327 TIFAQ96CG3 184 aa17.12■□□□□ 0.33
TRAF3IP1-201ENST00000373327 UGT2B11O75310 529 aa17.11■□□□□ 0.33
TRAF3IP1-201ENST00000373327 NUDT7P0C024 238 aa17.11■□□□□ 0.33
TRAF3IP1-201ENST00000373327 C8orf89P0DMQ9 161 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms