RNA–Protein interactions for RNA: ENST00000371429.3

NDC1-201, Transcript of NDC1 transmembrane nucleoporin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDC1, Length 5,134 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-201ENST00000371429 OR8D2Q9GZM6 311 aa14.32□□□□□ -0.12
NDC1-201ENST00000371429 SMPD3Q9NY59 655 aaPredicted RBP14.32□□□□□ -0.12
NDC1-201ENST00000371429 CAPN8A6NHC0 703 aa14.31□□□□□ -0.12
NDC1-201ENST00000371429 IQCJ-SCHIP1C9J366 451 aaPredicted RBP14.31□□□□□ -0.12
NDC1-201ENST00000371429 CHRM1P11229 460 aaPredicted RBP14.31□□□□□ -0.12
NDC1-201ENST00000371429 DNAJB1P25685 340 aa14.31□□□□□ -0.12
NDC1-201ENST00000371429 FOXN2P32314 431 aa14.31□□□□□ -0.12
NDC1-201ENST00000371429 RPS9P46781 194 aaKnown RBP14.31□□□□□ -0.12
NDC1-201ENST00000371429 P4HA3Q7Z4N8 544 aa14.31□□□□□ -0.12
NDC1-201ENST00000371429 THAP5Q7Z6K1 395 aa14.31□□□□□ -0.12
NDC1-201ENST00000371429 MRPL43Q8N983 215 aaKnown RBP14.31□□□□□ -0.12
NDC1-201ENST00000371429 ZNF483Q8TF39 744 aaPredicted RBP14.31□□□□□ -0.12
NDC1-201ENST00000371429 ZNF570Q96NI8 536 aa14.31□□□□□ -0.12
NDC1-201ENST00000371429 ZNF347Q96SE7 839 aa14.31□□□□□ -0.12
NDC1-201ENST00000371429 COQ7Q99807 217 aa14.31□□□□□ -0.12
NDC1-201ENST00000371429 MCOLN1Q9GZU1 580 aa14.31□□□□□ -0.12
NDC1-201ENST00000371429 OR51V1Q9H2C8 321 aa14.31□□□□□ -0.12
NDC1-201ENST00000371429 TMEM233B4DJY2 109 aa14.31□□□□□ -0.12
NDC1-201ENST00000371429 CASKO14936 926 aa14.31□□□□□ -0.12
NDC1-201ENST00000371429 ITM2AO43736 263 aa14.31□□□□□ -0.12
NDC1-201ENST00000371429 C8orf89P0DMQ9 161 aa14.31□□□□□ -0.12
NDC1-201ENST00000371429 ENGP17813 658 aa14.31□□□□□ -0.12
NDC1-201ENST00000371429 CLCN4P51793 760 aa14.31□□□□□ -0.12
NDC1-201ENST00000371429 VSX2P58304 361 aaPredicted RBP14.31□□□□□ -0.12
NDC1-201ENST00000371429 HNRNPKP61978 463 aaKnown RBP eCLIP14.31□□□□□ -0.12
NDC1-201ENST00000371429 ACSBG2Q5FVE4 666 aa14.31□□□□□ -0.12
NDC1-201ENST00000371429 MARCH8Q5T0T0 291 aa14.31□□□□□ -0.12
NDC1-201ENST00000371429 TICAM1Q8IUC6 712 aa14.31□□□□□ -0.12
NDC1-201ENST00000371429 ZDHHC14Q8IZN3 488 aa14.31□□□□□ -0.12
NDC1-201ENST00000371429 CBR4Q8N4T8 237 aa14.31□□□□□ -0.12
NDC1-201ENST00000371429 ZNF433Q8N7K0 673 aaPredicted RBP14.31□□□□□ -0.12
NDC1-201ENST00000371429 TMEM125Q96AQ2 219 aa14.31□□□□□ -0.12
NDC1-201ENST00000371429 C17orf62Q9BQA9 187 aa14.31□□□□□ -0.12
NDC1-201ENST00000371429 TRIM39Q9HCM9 518 aa14.31□□□□□ -0.12
NDC1-201ENST00000371429 FZD3Q9NPG1 666 aa14.31□□□□□ -0.12
NDC1-201ENST00000371429 RGS17Q9UGC6 210 aaPredicted RBP14.31□□□□□ -0.12
NDC1-201ENST00000371429 DUX1O43812 170 aa14.31□□□□□ -0.12
NDC1-201ENST00000371429 TSC22D2O75157 780 aa14.31□□□□□ -0.12
NDC1-201ENST00000371429 PRAMEF12O95522 483 aa14.31□□□□□ -0.12
NDC1-201ENST00000371429 RPL5P46777 297 aaKnown RBP14.31□□□□□ -0.12
NDC1-201ENST00000371429 DGKQP52824 942 aa14.31□□□□□ -0.12
NDC1-201ENST00000371429 MEF2AQ02078 507 aaPredicted RBP14.31□□□□□ -0.12
NDC1-201ENST00000371429 TARDBPQ13148 414 aaKnown RBP eCLIP14.31□□□□□ -0.12
NDC1-201ENST00000371429 TCEAL1Q15170 157 aa14.31□□□□□ -0.12
NDC1-201ENST00000371429 TMEM130Q8N3G9 435 aa14.31□□□□□ -0.12
NDC1-201ENST00000371429 SLC17A9Q9BYT1 436 aa14.31□□□□□ -0.12
NDC1-201ENST00000371429 LMAN1LQ9HAT1 526 aa14.31□□□□□ -0.12
NDC1-201ENST00000371429 SDHAF3Q9NRP4 125 aa14.31□□□□□ -0.12
NDC1-201ENST00000371429 ZIM2Q9NZV7 527 aa14.31□□□□□ -0.12
NDC1-201ENST00000371429 OAS3Q9Y6K5 1087 aaKnown RBP14.31□□□□□ -0.12
NDC1-201ENST00000371429 LDOC1O95751 146 aaPredicted RBP14.31□□□□□ -0.12
NDC1-201ENST00000371429 UBAP2Q5T6F2 1119 aaKnown RBP14.31□□□□□ -0.12
NDC1-201ENST00000371429 MZT2BQ6NZ67 158 aa14.31□□□□□ -0.12
NDC1-201ENST00000371429 SLC22A15Q8IZD6 547 aa14.31□□□□□ -0.12
NDC1-201ENST00000371429 GJD2Q9UKL4 321 aa14.31□□□□□ -0.12
NDC1-201ENST00000371429 MED31Q9Y3C7 131 aa14.31□□□□□ -0.12
NDC1-201ENST00000371429 PSAT1Q9Y617 370 aa14.31□□□□□ -0.12
NDC1-201ENST00000371429 KDM3BQ7LBC6 1761 aa14.31□□□□□ -0.12
NDC1-201ENST00000371429 IQCMA0A1B0GVH7 501 aa14.3□□□□□ -0.12
NDC1-201ENST00000371429 OR6C74A6NCV1 312 aa14.3□□□□□ -0.12
NDC1-201ENST00000371429 ZNF726A6NNF4 738 aa14.3□□□□□ -0.12
NDC1-201ENST00000371429 PCDHGA12O60330 932 aa14.3□□□□□ -0.12
NDC1-201ENST00000371429 ZZZ3Q8IYH5 903 aa14.3□□□□□ -0.12
NDC1-201ENST00000371429 TP53INP1Q96A56 240 aa14.3□□□□□ -0.12
NDC1-201ENST00000371429 METTL7AQ9H8H3 244 aa14.3□□□□□ -0.12
NDC1-201ENST00000371429 POPDC3Q9HBV1 291 aa14.3□□□□□ -0.12
NDC1-201ENST00000371429 NEUROD4Q9HD90 331 aa14.3□□□□□ -0.12
NDC1-201ENST00000371429 RHBDL2Q9NX52 303 aa14.3□□□□□ -0.12
NDC1-201ENST00000371429 CHD4Q14839 1912 aa14.3□□□□□ -0.12
NDC1-201ENST00000371429 STX16-NPEPL1H3BU86 382 aa14.3□□□□□ -0.12
NDC1-201ENST00000371429 TMEM189-UBE2V1I3L0A0 370 aa14.3□□□□□ -0.12
NDC1-201ENST00000371429 AGPSO00116 658 aa14.3□□□□□ -0.12
NDC1-201ENST00000371429 STX16O14662 325 aa14.3□□□□□ -0.12
NDC1-201ENST00000371429 HEXBP07686 556 aa14.3□□□□□ -0.12
NDC1-201ENST00000371429 DRD1P21728 446 aa14.3□□□□□ -0.12
NDC1-201ENST00000371429 MNDAP41218 407 aa14.3□□□□□ -0.12
NDC1-201ENST00000371429 B3GNT9Q6UX72 402 aa14.3□□□□□ -0.12
NDC1-201ENST00000371429 OR5M3Q8NGP4 307 aa14.3□□□□□ -0.12
NDC1-201ENST00000371429 NAT14Q8WUY8 206 aa14.3□□□□□ -0.12
NDC1-201ENST00000371429 KLHL6Q8WZ60 621 aa14.3□□□□□ -0.12
NDC1-201ENST00000371429 CHID1Q9BWS9 393 aa14.3□□□□□ -0.12
NDC1-201ENST00000371429 SPATA9Q9BWV2 254 aa14.3□□□□□ -0.12
NDC1-201ENST00000371429 PDE7BQ9NP56 450 aa14.3□□□□□ -0.12
NDC1-201ENST00000371429 BTBD3Q9Y2F9 522 aa14.3□□□□□ -0.12
NDC1-201ENST00000371429 BTN3A3O00478 584 aa14.3□□□□□ -0.12
NDC1-201ENST00000371429 ADAMTS4O75173 837 aa14.3□□□□□ -0.12
NDC1-201ENST00000371429 TRAPPC6AO75865 159 aa14.3□□□□□ -0.12
NDC1-201ENST00000371429 FADS2O95864 444 aaKnown RBP14.3□□□□□ -0.12
NDC1-201ENST00000371429 ACRV1P26436 265 aa14.3□□□□□ -0.12
NDC1-201ENST00000371429 S100GP29377 79 aa14.3□□□□□ -0.12
NDC1-201ENST00000371429 SNTA1Q13424 505 aa14.3□□□□□ -0.12
NDC1-201ENST00000371429 EMC10Q5UCC4 262 aa14.3□□□□□ -0.12
NDC1-201ENST00000371429 CAND1Q86VP6 1230 aaKnown RBP14.3□□□□□ -0.12
NDC1-201ENST00000371429 C12orf40Q86WS4 652 aa14.3□□□□□ -0.12
NDC1-201ENST00000371429 FAM192AQ9GZU8 254 aa14.3□□□□□ -0.12
NDC1-201ENST00000371429 CLEC4MQ9H2X3 399 aaPredicted RBP14.3□□□□□ -0.12
NDC1-201ENST00000371429 MVB12BQ9H7P6 319 aa14.3□□□□□ -0.12
NDC1-201ENST00000371429 ZDHHC2Q9UIJ5 367 aa14.3□□□□□ -0.12
NDC1-201ENST00000371429 DLGAP4Q9Y2H0 992 aa14.3□□□□□ -0.12
NDC1-201ENST00000371429 RGPD5Q99666 1765 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms