RNA–Protein interactions for RNA: ENST00000370085.3

SSR4-202, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2 BASIC

Gene SSR4, Length 526 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-202ENST00000370085 PDK4Q16654 411 aa13.2□□□□□ -0.3
SSR4-202ENST00000370085 PFKFB4Q16877 469 aa13.2□□□□□ -0.3
SSR4-202ENST00000370085 DEFB110Q30KQ9 67 aa13.2□□□□□ -0.3
SSR4-202ENST00000370085 FAM214AQ32MH5 1076 aa13.2□□□□□ -0.3
SSR4-202ENST00000370085 BROXQ5VW32 411 aa13.2□□□□□ -0.3
SSR4-202ENST00000370085 ZNF425Q6IV72 752 aa13.2□□□□□ -0.3
SSR4-202ENST00000370085 PWWP2BQ6NUJ5 590 aa13.2□□□□□ -0.3
SSR4-202ENST00000370085 C6orf15Q6UXA7 325 aaPredicted RBP13.2□□□□□ -0.3
SSR4-202ENST00000370085 RNF44Q7L0R7 432 aa13.2□□□□□ -0.3
SSR4-202ENST00000370085 PAQR7Q86WK9 346 aa13.2□□□□□ -0.3
SSR4-202ENST00000370085 PROSER1Q86XN7 944 aa13.2□□□□□ -0.3
SSR4-202ENST00000370085 NLGN4XQ8N0W4 816 aa13.2□□□□□ -0.3
SSR4-202ENST00000370085 PLD6Q8N2A8 252 aaKnown RBP13.2□□□□□ -0.3
SSR4-202ENST00000370085 SNX31Q8N9S9 440 aa13.2□□□□□ -0.3
SSR4-202ENST00000370085 NLGN4YQ8NFZ3 816 aaPredicted RBP13.2□□□□□ -0.3
SSR4-202ENST00000370085 OR1L3Q8NH93 324 aa13.2□□□□□ -0.3
SSR4-202ENST00000370085 UBTD2Q8WUN7 234 aa13.2□□□□□ -0.3
SSR4-202ENST00000370085 KIAA1143Q96AT1 154 aaPredicted RBP13.2□□□□□ -0.3
SSR4-202ENST00000370085 CLIP3Q96DZ5 547 aa13.2□□□□□ -0.3
SSR4-202ENST00000370085 PRAP1Q96NZ9 151 aa13.2□□□□□ -0.3
SSR4-202ENST00000370085 GPR78Q96P69 363 aa13.2□□□□□ -0.3
SSR4-202ENST00000370085 AIF1LQ9BQI0 150 aa13.2□□□□□ -0.3
SSR4-202ENST00000370085 EFHD1Q9BUP0 239 aa13.2□□□□□ -0.3
SSR4-202ENST00000370085 STMN4Q9H169 189 aaPredicted RBP13.2□□□□□ -0.3
SSR4-202ENST00000370085 ACTR5Q9H9F9 607 aaPredicted RBP13.2□□□□□ -0.3
SSR4-202ENST00000370085 PELI2Q9HAT8 420 aa13.2□□□□□ -0.3
SSR4-202ENST00000370085 TXLNGQ9NUQ3 528 aa13.2□□□□□ -0.3
SSR4-202ENST00000370085 SENP1Q9P0U3 644 aa13.2□□□□□ -0.3
SSR4-202ENST00000370085 XPR1Q9UBH6 696 aa13.2□□□□□ -0.3
SSR4-202ENST00000370085 LGALS13Q9UHV8 139 aa13.2□□□□□ -0.3
SSR4-202ENST00000370085 GRID1Q9ULK0 1009 aa13.2□□□□□ -0.3
SSR4-202ENST00000370085 TMEM184BQ9Y519 407 aaPredicted RBP13.2□□□□□ -0.3
SSR4-202ENST00000370085 URB1O60287 2271 aaKnown RBP13.2□□□□□ -0.3
SSR4-202ENST00000370085 FRYQ5TBA9 3013 aa13.2□□□□□ -0.3
SSR4-202ENST00000370085 FREM2Q5SZK8 3169 aa13.2□□□□□ -0.3
SSR4-202ENST00000370085 A0A0J9YVX5 310 aa13.19□□□□□ -0.3
SSR4-202ENST00000370085 GOLGA8RI6L899 631 aa13.19□□□□□ -0.3
SSR4-202ENST00000370085 K7EPI3 171 aa13.19□□□□□ -0.3
SSR4-202ENST00000370085 MAP2K7O14733 419 aa13.19□□□□□ -0.3
SSR4-202ENST00000370085 RGS16O15492 202 aaPredicted RBP13.19□□□□□ -0.3
SSR4-202ENST00000370085 EPB42P16452 691 aa13.19□□□□□ -0.3
SSR4-202ENST00000370085 KRT4P19013 534 aa13.19□□□□□ -0.3
SSR4-202ENST00000370085 GMPRP36959 345 aa13.19□□□□□ -0.3
SSR4-202ENST00000370085 VSX2P58304 361 aaPredicted RBP13.19□□□□□ -0.3
SSR4-202ENST00000370085 SETDB1Q15047 1291 aa13.19□□□□□ -0.3
SSR4-202ENST00000370085 CCDC153Q494R4 210 aa13.19□□□□□ -0.3
SSR4-202ENST00000370085 LRIG3Q6UXM1 1119 aa13.19□□□□□ -0.3
SSR4-202ENST00000370085 TMPRSS11BQ86T26 416 aa13.19□□□□□ -0.3
SSR4-202ENST00000370085 KRT78Q8N1N4 520 aa13.19□□□□□ -0.3
SSR4-202ENST00000370085 IL22RA1Q8N6P7 574 aa13.19□□□□□ -0.3
SSR4-202ENST00000370085 ABHD11Q8NFV4 315 aa13.19□□□□□ -0.3
SSR4-202ENST00000370085 MZB1Q8WU39 189 aa13.19□□□□□ -0.3
SSR4-202ENST00000370085 NEIL2Q969S2 332 aa13.19□□□□□ -0.3
SSR4-202ENST00000370085 CCDC126Q96EE4 140 aa13.19□□□□□ -0.3
SSR4-202ENST00000370085 C17orf62Q9BQA9 187 aa13.19□□□□□ -0.3
SSR4-202ENST00000370085 DPH2Q9BQC3 489 aaPredicted RBP13.19□□□□□ -0.3
SSR4-202ENST00000370085 PITHD1Q9GZP4 211 aaPredicted RBP13.19□□□□□ -0.3
SSR4-202ENST00000370085 CUEDC1Q9NWM3 386 aaPredicted RBP13.19□□□□□ -0.3
SSR4-202ENST00000370085 MID2Q9UJV3 735 aa13.19□□□□□ -0.3
SSR4-202ENST00000370085 PILRAQ9UKJ1 303 aa13.19□□□□□ -0.3
SSR4-202ENST00000370085 SPTBP11277 2137 aa13.18□□□□□ -0.3
SSR4-202ENST00000370085 MDC1Q14676 2089 aaKnown RBP13.18□□□□□ -0.3
SSR4-202ENST00000370085 KCNE1BA0A087WTH5 132 aa13.18□□□□□ -0.3
SSR4-202ENST00000370085 IGKV1-8A0A0C4DH67 115 aa13.18□□□□□ -0.3
SSR4-202ENST00000370085 STX16-NPEPL1H3BU86 382 aa13.18□□□□□ -0.3
SSR4-202ENST00000370085 STX16O14662 325 aa13.18□□□□□ -0.3
SSR4-202ENST00000370085 HAT1O14929 419 aa13.18□□□□□ -0.3
SSR4-202ENST00000370085 TAPBPO15533 448 aa13.18□□□□□ -0.3
SSR4-202ENST00000370085 CTIFO43310 598 aaKnown RBP13.18□□□□□ -0.3
SSR4-202ENST00000370085 ZNF749O43361 778 aa13.18□□□□□ -0.3
SSR4-202ENST00000370085 RAD1O60671 282 aa13.18□□□□□ -0.3
SSR4-202ENST00000370085 CTSVO60911 334 aa13.18□□□□□ -0.3
SSR4-202ENST00000370085 EIF2S1P05198 315 aaKnown RBP13.18□□□□□ -0.3
SSR4-202ENST00000370085 AGXTP21549 392 aa13.18□□□□□ -0.3
SSR4-202ENST00000370085 HPDP32754 393 aaPredicted RBP13.18□□□□□ -0.3
SSR4-202ENST00000370085 GDF5P43026 501 aa13.18□□□□□ -0.3
SSR4-202ENST00000370085 GABRA4P48169 554 aa13.18□□□□□ -0.3
SSR4-202ENST00000370085 KCNC1P48547 511 aa13.18□□□□□ -0.3
SSR4-202ENST00000370085 CSNK1G2P78368 415 aa13.18□□□□□ -0.3
SSR4-202ENST00000370085 LAPTM5Q13571 262 aa13.18□□□□□ -0.3
SSR4-202ENST00000370085 HIST2H2ACQ16777 129 aaPredicted RBP13.18□□□□□ -0.3
SSR4-202ENST00000370085 NDUFA9Q16795 377 aa13.18□□□□□ -0.3
SSR4-202ENST00000370085 PAGE2BQ5JRK9 111 aa13.18□□□□□ -0.3
SSR4-202ENST00000370085 HIST2H2AA3Q6FI13 130 aa13.18□□□□□ -0.3
SSR4-202ENST00000370085 NXPE4Q6UWF7 544 aa13.18□□□□□ -0.3
SSR4-202ENST00000370085 ZFAND4Q86XD8 727 aa13.18□□□□□ -0.3
SSR4-202ENST00000370085 SLC22A9Q8IVM8 553 aa13.18□□□□□ -0.3
SSR4-202ENST00000370085 CACNA2D3Q8IZS8 1091 aa13.18□□□□□ -0.3
SSR4-202ENST00000370085 MYRIPQ8NFW9 859 aa13.18□□□□□ -0.3
SSR4-202ENST00000370085 TTLQ8NG68 377 aa13.18□□□□□ -0.3
SSR4-202ENST00000370085 PMEPA1Q969W9 287 aa13.18□□□□□ -0.3
SSR4-202ENST00000370085 PKNOX2Q96KN3 472 aa13.18□□□□□ -0.3
SSR4-202ENST00000370085 LRFN5Q96NI6 719 aa13.18□□□□□ -0.3
SSR4-202ENST00000370085 DCBLD2Q96PD2 775 aa13.18□□□□□ -0.3
SSR4-202ENST00000370085 OR4K3Q96R72 315 aa13.18□□□□□ -0.3
SSR4-202ENST00000370085 SMC6Q96SB8 1091 aa13.18□□□□□ -0.3
SSR4-202ENST00000370085 TMEM79Q9BSE2 394 aa13.18□□□□□ -0.3
SSR4-202ENST00000370085 EHD1Q9H4M9 534 aa13.18□□□□□ -0.3
SSR4-202ENST00000370085 PRM3Q9NNZ6 103 aa13.18□□□□□ -0.3
SSR4-202ENST00000370085 ZNF358Q9NW07 568 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms