RNA–Protein interactions for RNA: ENST00000368292.10

ECHDC1-204, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 854 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-204ENST00000368292 NAGLUP54802 743 aa4.94□□□□□ -1.62
ECHDC1-204ENST00000368292 RAB14P61106 215 aa4.94□□□□□ -1.62
ECHDC1-204ENST00000368292 EEF1A1P68104 462 aaKnown RBP4.94□□□□□ -1.62
ECHDC1-204ENST00000368292 EEF1A2Q05639 463 aaKnown RBP4.94□□□□□ -1.62
ECHDC1-204ENST00000368292 FOXI1Q12951 378 aa4.94□□□□□ -1.62
ECHDC1-204ENST00000368292 CALCOCO2Q13137 446 aa4.94□□□□□ -1.62
ECHDC1-204ENST00000368292 ITGB3BPQ13352 177 aaPredicted RBP4.94□□□□□ -1.62
ECHDC1-204ENST00000368292 MSLNQ13421 630 aaPredicted RBP4.94□□□□□ -1.62
ECHDC1-204ENST00000368292 PCLAFQ15004 111 aa4.94□□□□□ -1.62
ECHDC1-204ENST00000368292 MED22Q15528 200 aa4.94□□□□□ -1.62
ECHDC1-204ENST00000368292 FAM83EQ2M2I3 478 aa4.94□□□□□ -1.62
ECHDC1-204ENST00000368292 PRICKLE4Q2TBC4 344 aa4.94□□□□□ -1.62
ECHDC1-204ENST00000368292 USH1GQ495M9 461 aa4.94□□□□□ -1.62
ECHDC1-204ENST00000368292 COLEC12Q5KU26 742 aa4.94□□□□□ -1.62
ECHDC1-204ENST00000368292 SAPCD1Q5SSQ6 148 aa4.94□□□□□ -1.62
ECHDC1-204ENST00000368292 HECTD2Q5U5R9 776 aa4.94□□□□□ -1.62
ECHDC1-204ENST00000368292 EEF1A1P5Q5VTE0 462 aa4.94□□□□□ -1.62
ECHDC1-204ENST00000368292 CES3Q6UWW8 571 aa4.94□□□□□ -1.62
ECHDC1-204ENST00000368292 KCTD9Q7L273 389 aa4.94□□□□□ -1.62
ECHDC1-204ENST00000368292 ASPGQ86U10 573 aa4.94□□□□□ -1.62
ECHDC1-204ENST00000368292 BIVMQ86UB2 503 aa4.94□□□□□ -1.62
ECHDC1-204ENST00000368292 AMZ2Q86W34 360 aa4.94□□□□□ -1.62
ECHDC1-204ENST00000368292 RASGRP3Q8IV61 690 aa4.94□□□□□ -1.62
ECHDC1-204ENST00000368292 SLC15A3Q8IY34 581 aa4.94□□□□□ -1.62
ECHDC1-204ENST00000368292 LCORLQ8N3X6 602 aa4.94□□□□□ -1.62
ECHDC1-204ENST00000368292 KDM1BQ8NB78 822 aa4.94□□□□□ -1.62
ECHDC1-204ENST00000368292 RBM15BQ8NDT2 890 aaKnown RBP4.94□□□□□ -1.62
ECHDC1-204ENST00000368292 SPATA4Q8NEY3 305 aa4.94□□□□□ -1.62
ECHDC1-204ENST00000368292 CHURC1Q8WUH1 139 aa4.94□□□□□ -1.62
ECHDC1-204ENST00000368292 OR1E3Q8WZA6 343 aa4.94□□□□□ -1.62
ECHDC1-204ENST00000368292 ISG20Q96AZ6 181 aaKnown RBP4.94□□□□□ -1.62
ECHDC1-204ENST00000368292 RHBDF1Q96CC6 855 aa4.94□□□□□ -1.62
ECHDC1-204ENST00000368292 CCDC51Q96ER9 411 aa4.94□□□□□ -1.62
ECHDC1-204ENST00000368292 KAZALD1Q96I82 304 aa4.94□□□□□ -1.62
ECHDC1-204ENST00000368292 CEP19Q96LK0 163 aa4.94□□□□□ -1.62
ECHDC1-204ENST00000368292 Q96MF0 132 aa4.94□□□□□ -1.62
ECHDC1-204ENST00000368292 TSNARE1Q96NA8 513 aa4.94□□□□□ -1.62
ECHDC1-204ENST00000368292 ANKRD27Q96NW4 1050 aa4.94□□□□□ -1.62
ECHDC1-204ENST00000368292 OSBPL9Q96SU4 736 aa4.94□□□□□ -1.62
ECHDC1-204ENST00000368292 PKP2Q99959 881 aa4.94□□□□□ -1.62
ECHDC1-204ENST00000368292 FERMT1Q9BQL6 677 aa4.94□□□□□ -1.62
ECHDC1-204ENST00000368292 JPH2Q9BR39 696 aaPredicted RBP4.94□□□□□ -1.62
ECHDC1-204ENST00000368292 CINPQ9BW66 212 aaPredicted RBP4.94□□□□□ -1.62
ECHDC1-204ENST00000368292 BBS2Q9BXC9 721 aa4.94□□□□□ -1.62
ECHDC1-204ENST00000368292 AMBRA1Q9C0C7 1298 aa4.94□□□□□ -1.62
ECHDC1-204ENST00000368292 TMEM117Q9H0C3 514 aa4.94□□□□□ -1.62
ECHDC1-204ENST00000368292 TOR3AQ9H497 397 aa4.94□□□□□ -1.62
ECHDC1-204ENST00000368292 EVA1AQ9H8M9 152 aa4.94□□□□□ -1.62
ECHDC1-204ENST00000368292 FSCN3Q9NQT6 498 aa4.94□□□□□ -1.62
ECHDC1-204ENST00000368292 KLHL28Q9NXS3 571 aa4.94□□□□□ -1.62
ECHDC1-204ENST00000368292 SERTAD3Q9UJW9 196 aa4.94□□□□□ -1.62
ECHDC1-204ENST00000368292 PACSIN3Q9UKS6 424 aa4.94□□□□□ -1.62
ECHDC1-204ENST00000368292 DNPEPQ9ULA0 475 aa4.94□□□□□ -1.62
ECHDC1-204ENST00000368292 SLC22A14Q9Y267 594 aa4.94□□□□□ -1.62
ECHDC1-204ENST00000368292 PCDHA10Q9Y5I2 948 aa4.94□□□□□ -1.62
ECHDC1-204ENST00000368292 SNX14Q9Y5W7 946 aa4.94□□□□□ -1.62
ECHDC1-204ENST00000368292 TEX264Q9Y6I9 313 aa4.94□□□□□ -1.62
ECHDC1-204ENST00000368292 U3KQV3 271 aa4.94□□□□□ -1.62
ECHDC1-204ENST00000368292 LCTP09848 1927 aa4.93□□□□□ -1.62
ECHDC1-204ENST00000368292 FAM230AA0A1W2PPH8 454 aa4.93□□□□□ -1.62
ECHDC1-204ENST00000368292 TRBC2A0A5B9 178 aa4.93□□□□□ -1.62
ECHDC1-204ENST00000368292 TMEM120BA0PK00 339 aa4.93□□□□□ -1.62
ECHDC1-204ENST00000368292 VWA3AA6NCI4 1184 aa4.93□□□□□ -1.62
ECHDC1-204ENST00000368292 TMEM8BA6NDV4 472 aa4.93□□□□□ -1.62
ECHDC1-204ENST00000368292 IQCF5A8MTL0 148 aa4.93□□□□□ -1.62
ECHDC1-204ENST00000368292 GOLGA8RI6L899 631 aa4.93□□□□□ -1.62
ECHDC1-204ENST00000368292 J3KTA2 159 aa4.93□□□□□ -1.62
ECHDC1-204ENST00000368292 TSPAN4O14817 238 aa4.93□□□□□ -1.62
ECHDC1-204ENST00000368292 KLK10O43240 276 aa4.93□□□□□ -1.62
ECHDC1-204ENST00000368292 LRRTM2O43300 516 aa4.93□□□□□ -1.62
ECHDC1-204ENST00000368292 CCNT2O60583 730 aaKnown RBP4.93□□□□□ -1.62
ECHDC1-204ENST00000368292 DNAJB6O75190 326 aa4.93□□□□□ -1.62
ECHDC1-204ENST00000368292 TRIM3O75382 744 aaPredicted RBP4.93□□□□□ -1.62
ECHDC1-204ENST00000368292 TADA2AO75478 443 aa4.93□□□□□ -1.62
ECHDC1-204ENST00000368292 KRT36O76013 467 aa4.93□□□□□ -1.62
ECHDC1-204ENST00000368292 AGTP01019 485 aa4.93□□□□□ -1.62
ECHDC1-204ENST00000368292 VIPP01282 170 aa4.93□□□□□ -1.62
ECHDC1-204ENST00000368292 IGHEP01854 428 aa4.93□□□□□ -1.62
ECHDC1-204ENST00000368292 KRT6BP04259 564 aa4.93□□□□□ -1.62
ECHDC1-204ENST00000368292 ERBB2P04626 1255 aa4.93□□□□□ -1.62
ECHDC1-204ENST00000368292 HKR1P10072 659 aa4.93□□□□□ -1.62
ECHDC1-204ENST00000368292 EZRP15311 586 aaKnown RBP4.93□□□□□ -1.62
ECHDC1-204ENST00000368292 SFNP31947 248 aa4.93□□□□□ -1.62
ECHDC1-204ENST00000368292 CTNNB1P35222 781 aa4.93□□□□□ -1.62
ECHDC1-204ENST00000368292 BSGP35613 385 aa4.93□□□□□ -1.62
ECHDC1-204ENST00000368292 FASLGP48023 281 aa4.93□□□□□ -1.62
ECHDC1-204ENST00000368292 KRT6CP48668 564 aa4.93□□□□□ -1.62
ECHDC1-204ENST00000368292 PGDP52209 483 aa4.93□□□□□ -1.62
ECHDC1-204ENST00000368292 MRPL12P52815 198 aaKnown RBP4.93□□□□□ -1.62
ECHDC1-204ENST00000368292 SNU13P55769 128 aaKnown RBP4.93□□□□□ -1.62
ECHDC1-204ENST00000368292 STX17P56962 302 aa4.93□□□□□ -1.62
ECHDC1-204ENST00000368292 BLOC1S1P78537 153 aa4.93□□□□□ -1.62
ECHDC1-204ENST00000368292 S100A12P80511 92 aa4.93□□□□□ -1.62
ECHDC1-204ENST00000368292 TIAL1Q01085 375 aaKnown RBP eCLIP4.93□□□□□ -1.62
ECHDC1-204ENST00000368292 SNTB1Q13884 538 aaKnown RBP4.93□□□□□ -1.62
ECHDC1-204ENST00000368292 CCNIQ14094 377 aa4.93□□□□□ -1.62
ECHDC1-204ENST00000368292 GRM4Q14833 912 aa4.93□□□□□ -1.62
ECHDC1-204ENST00000368292 PON2Q15165 354 aa4.93□□□□□ -1.62
ECHDC1-204ENST00000368292 HYAL4Q2M3T9 481 aa4.93□□□□□ -1.62
ECHDC1-204ENST00000368292 NKAIN1Q4KMZ8 207 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms