RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 TRIM48Q8IWZ4 208 aa13.36□□□□□ -0.27
PDLIM5-203ENST00000359265 OR52E1Q8NGJ3 308 aa13.36□□□□□ -0.27
PDLIM5-203ENST00000359265 C1orf216Q8TAB5 229 aa13.36□□□□□ -0.27
PDLIM5-203ENST00000359265 NEIL2Q969S2 332 aa13.36□□□□□ -0.27
PDLIM5-203ENST00000359265 KLHL29Q96CT2 875 aa13.36□□□□□ -0.27
PDLIM5-203ENST00000359265 CMTM5Q96DZ9 223 aa13.36□□□□□ -0.27
PDLIM5-203ENST00000359265 TCEAL2Q9H3H9 227 aaPredicted RBP13.36□□□□□ -0.27
PDLIM5-203ENST00000359265 RXFP3Q9NSD7 469 aa13.36□□□□□ -0.27
PDLIM5-203ENST00000359265 SCHIP1Q9P0W5 487 aaPredicted RBP13.36□□□□□ -0.27
PDLIM5-203ENST00000359265 TAAR2Q9P1P5 351 aa13.36□□□□□ -0.27
PDLIM5-203ENST00000359265 GIMAP2Q9UG22 337 aa13.36□□□□□ -0.27
PDLIM5-203ENST00000359265 TAC3Q9UHF0 121 aa13.36□□□□□ -0.27
PDLIM5-203ENST00000359265 WASF3Q9UPY6 502 aa13.36□□□□□ -0.27
PDLIM5-203ENST00000359265 ICKQ9UPZ9 632 aa13.36□□□□□ -0.27
PDLIM5-203ENST00000359265 PCDHGA11Q9Y5H2 935 aa13.36□□□□□ -0.27
PDLIM5-203ENST00000359265 SNRNP200O75643 2136 aaKnown RBP13.36□□□□□ -0.27
PDLIM5-203ENST00000359265 SMG1Q96Q15 3661 aaKnown RBP13.35□□□□□ -0.27
PDLIM5-203ENST00000359265 KIR2DS5A0A0G2JLQ3 304 aa13.35□□□□□ -0.27
PDLIM5-203ENST00000359265 A0A0G2JNG1 304 aa13.35□□□□□ -0.27
PDLIM5-203ENST00000359265 SERTM1A2A2V5 107 aa13.35□□□□□ -0.27
PDLIM5-203ENST00000359265 CFAP73A6NFT4 308 aa13.35□□□□□ -0.27
PDLIM5-203ENST00000359265 ANKRD65E5RJM6 399 aa13.35□□□□□ -0.27
PDLIM5-203ENST00000359265 H0YIV9 168 aa13.35□□□□□ -0.27
PDLIM5-203ENST00000359265 KIR2DS3K7RE56 304 aa13.35□□□□□ -0.27
PDLIM5-203ENST00000359265 LSM1O15116 133 aaKnown RBP13.35□□□□□ -0.27
PDLIM5-203ENST00000359265 HRO43593 1189 aa13.35□□□□□ -0.27
PDLIM5-203ENST00000359265 LRP3O75074 770 aa13.35□□□□□ -0.27
PDLIM5-203ENST00000359265 PEX11AO75192 247 aa13.35□□□□□ -0.27
PDLIM5-203ENST00000359265 EML2O95834 649 aa13.35□□□□□ -0.27
PDLIM5-203ENST00000359265 PDYNP01213 254 aa13.35□□□□□ -0.27
PDLIM5-203ENST00000359265 ALDOCP09972 364 aaKnown RBP13.35□□□□□ -0.27
PDLIM5-203ENST00000359265 COX4I1P13073 169 aa13.35□□□□□ -0.27
PDLIM5-203ENST00000359265 HSD3B1P14060 373 aa13.35□□□□□ -0.27
PDLIM5-203ENST00000359265 NME1P15531 152 aaKnown RBP13.35□□□□□ -0.27
PDLIM5-203ENST00000359265 CD22P20273 847 aa13.35□□□□□ -0.27
PDLIM5-203ENST00000359265 HSD3B2P26439 372 aa13.35□□□□□ -0.27
PDLIM5-203ENST00000359265 HOXD12P35452 270 aa13.35□□□□□ -0.27
PDLIM5-203ENST00000359265 MNAT1P51948 309 aa13.35□□□□□ -0.27
PDLIM5-203ENST00000359265 PHEXP78562 749 aa13.35□□□□□ -0.27
PDLIM5-203ENST00000359265 ACTN3Q08043 901 aaPredicted RBP13.35□□□□□ -0.27
PDLIM5-203ENST00000359265 SRSF5Q13243 272 aaKnown RBP13.35□□□□□ -0.27
PDLIM5-203ENST00000359265 KIR2DS5Q14953 304 aa13.35□□□□□ -0.27
PDLIM5-203ENST00000359265 RPS6KA2Q15349 733 aa13.35□□□□□ -0.27
PDLIM5-203ENST00000359265 HIST2H2ACQ16777 129 aaPredicted RBP13.35□□□□□ -0.27
PDLIM5-203ENST00000359265 ZNF542PQ5EBM4 170 aa13.35□□□□□ -0.27
PDLIM5-203ENST00000359265 HIST2H2AA3Q6FI13 130 aa13.35□□□□□ -0.27
PDLIM5-203ENST00000359265 MED27Q6P2C8 311 aa13.35□□□□□ -0.27
PDLIM5-203ENST00000359265 Q6ZSR9 355 aa13.35□□□□□ -0.27
PDLIM5-203ENST00000359265 MIER2Q8N344 545 aa13.35□□□□□ -0.27
PDLIM5-203ENST00000359265 SFRP1Q8N474 314 aa13.35□□□□□ -0.27
PDLIM5-203ENST00000359265 LMNTD1Q8N9Z9 388 aa13.35□□□□□ -0.27
PDLIM5-203ENST00000359265 FNDC5Q8NAU1 212 aa13.35□□□□□ -0.27
PDLIM5-203ENST00000359265 RP9Q8TA86 221 aaKnown RBP13.35□□□□□ -0.27
PDLIM5-203ENST00000359265 UBE2E3Q969T4 207 aa13.35□□□□□ -0.27
PDLIM5-203ENST00000359265 HBEGFQ99075 208 aa13.35□□□□□ -0.27
PDLIM5-203ENST00000359265 LRRC61Q9BV99 259 aa13.35□□□□□ -0.27
PDLIM5-203ENST00000359265 LRMDAQ9H2I8 198 aa13.35□□□□□ -0.27
PDLIM5-203ENST00000359265 PELI2Q9HAT8 420 aa13.35□□□□□ -0.27
PDLIM5-203ENST00000359265 FARSBQ9NSD9 589 aaKnown RBP13.35□□□□□ -0.27
PDLIM5-203ENST00000359265 POT1Q9NUX5 634 aa13.35□□□□□ -0.27
PDLIM5-203ENST00000359265 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.35□□□□□ -0.27
PDLIM5-203ENST00000359265 AIG1Q9NVV5 245 aa13.35□□□□□ -0.27
PDLIM5-203ENST00000359265 ZNF624Q9P2J8 865 aaPredicted RBP13.35□□□□□ -0.27
PDLIM5-203ENST00000359265 KLF15Q9UIH9 416 aa13.35□□□□□ -0.27
PDLIM5-203ENST00000359265 SH2B3Q9UQQ2 575 aa13.35□□□□□ -0.27
PDLIM5-203ENST00000359265 DSPP15924 2871 aaKnown RBP13.35□□□□□ -0.27
PDLIM5-203ENST00000359265 MAST4O15021 2626 aa13.35□□□□□ -0.27
PDLIM5-203ENST00000359265 DMXL2Q8TDJ6 3036 aa13.34□□□□□ -0.27
PDLIM5-203ENST00000359265 A0A1W2PPV9 198 aa13.34□□□□□ -0.27
PDLIM5-203ENST00000359265 PIPSLA2A3N6 862 aa13.34□□□□□ -0.27
PDLIM5-203ENST00000359265 PSMD12O00232 456 aaPredicted RBP13.34□□□□□ -0.27
PDLIM5-203ENST00000359265 RSL1D1O76021 490 aaKnown RBP13.34□□□□□ -0.27
PDLIM5-203ENST00000359265 CCNDBP1O95273 360 aa13.34□□□□□ -0.27
PDLIM5-203ENST00000359265 KCNK5O95279 499 aa13.34□□□□□ -0.27
PDLIM5-203ENST00000359265 CSF2P04141 144 aa13.34□□□□□ -0.27
PDLIM5-203ENST00000359265 THRAP10827 490 aa13.34□□□□□ -0.27
PDLIM5-203ENST00000359265 CDH1P12830 882 aa13.34□□□□□ -0.27
PDLIM5-203ENST00000359265 CXCR2P25025 360 aa13.34□□□□□ -0.27
PDLIM5-203ENST00000359265 VARSP26640 1264 aaKnown RBP13.34□□□□□ -0.27
PDLIM5-203ENST00000359265 PTPN4P29074 926 aa13.34□□□□□ -0.27
PDLIM5-203ENST00000359265 SLC19A1P41440 591 aa13.34□□□□□ -0.27
PDLIM5-203ENST00000359265 MRPL19P49406 292 aaKnown RBP13.34□□□□□ -0.27
PDLIM5-203ENST00000359265 CORO7P57737 925 aa13.34□□□□□ -0.27
PDLIM5-203ENST00000359265 NXPH1P58417 271 aa13.34□□□□□ -0.27
PDLIM5-203ENST00000359265 MXRA7P84157 204 aa13.34□□□□□ -0.27
PDLIM5-203ENST00000359265 EMX2Q04743 252 aa13.34□□□□□ -0.27
PDLIM5-203ENST00000359265 SIM2Q14190 667 aaPredicted RBP13.34□□□□□ -0.27
PDLIM5-203ENST00000359265 SLBPQ14493 270 aaKnown RBP eCLIP13.34□□□□□ -0.27
PDLIM5-203ENST00000359265 ELOCQ15369 112 aa13.34□□□□□ -0.27
PDLIM5-203ENST00000359265 CCDC6Q16204 474 aa13.34□□□□□ -0.27
PDLIM5-203ENST00000359265 AP5B1Q2VPB7 878 aa13.34□□□□□ -0.27
PDLIM5-203ENST00000359265 GLIPR1L2Q4G1C9 344 aa13.34□□□□□ -0.27
PDLIM5-203ENST00000359265 PRRT3Q5FWE3 981 aa13.34□□□□□ -0.27
PDLIM5-203ENST00000359265 C6orf136Q5SQH8 315 aa13.34□□□□□ -0.27
PDLIM5-203ENST00000359265 CATSPEREQ5SY80 951 aa13.34□□□□□ -0.27
PDLIM5-203ENST00000359265 NXPE4Q6UWF7 544 aa13.34□□□□□ -0.27
PDLIM5-203ENST00000359265 LAYNQ6UX15 382 aa13.34□□□□□ -0.27
PDLIM5-203ENST00000359265 ZFAND4Q86XD8 727 aa13.34□□□□□ -0.27
PDLIM5-203ENST00000359265 SNX32Q86XE0 403 aa13.34□□□□□ -0.27
PDLIM5-203ENST00000359265 KRT78Q8N1N4 520 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms