RNA–Protein interactions for RNA: ENST00000358730.6

RFX3-202, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 2,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-202ENST00000358730 PARNO95453 639 aaKnown RBP8.32□□□□□ -1.08
RFX3-202ENST00000358730 FADS2O95864 444 aaKnown RBP8.32□□□□□ -1.08
RFX3-202ENST00000358730 MYCP01106 439 aaPredicted RBP8.32□□□□□ -1.08
RFX3-202ENST00000358730 CXCL10P02778 98 aa8.32□□□□□ -1.08
RFX3-202ENST00000358730 PSMB9P28065 219 aa8.32□□□□□ -1.08
RFX3-202ENST00000358730 KDELR2P33947 212 aa8.32□□□□□ -1.08
RFX3-202ENST00000358730 CCR3P51677 355 aa8.32□□□□□ -1.08
RFX3-202ENST00000358730 ATN1P54259 1190 aaPredicted RBP8.32□□□□□ -1.08
RFX3-202ENST00000358730 WNT3P56703 355 aa8.32□□□□□ -1.08
RFX3-202ENST00000358730 LSM3P62310 102 aaKnown RBP8.32□□□□□ -1.08
RFX3-202ENST00000358730 SLC35A2P78381 396 aa8.32□□□□□ -1.08
RFX3-202ENST00000358730 ACSM2AQ08AH3 577 aa8.32□□□□□ -1.08
RFX3-202ENST00000358730 CSTF3Q12996 717 aaKnown RBP8.32□□□□□ -1.08
RFX3-202ENST00000358730 ITGADQ13349 1161 aa8.32□□□□□ -1.08
RFX3-202ENST00000358730 ACOX1Q15067 660 aa8.32□□□□□ -1.08
RFX3-202ENST00000358730 SF1Q15637 639 aaKnown RBP8.32□□□□□ -1.08
RFX3-202ENST00000358730 NPTX1Q15818 432 aa8.32□□□□□ -1.08
RFX3-202ENST00000358730 ACSM2BQ68CK6 577 aa8.32□□□□□ -1.08
RFX3-202ENST00000358730 LAIR1Q6GTX8 287 aa8.32□□□□□ -1.08
RFX3-202ENST00000358730 PTOV1Q86YD1 416 aa8.32□□□□□ -1.08
RFX3-202ENST00000358730 HS6ST3Q8IZP7 471 aa8.32□□□□□ -1.08
RFX3-202ENST00000358730 TTC29Q8NA56 475 aaPredicted RBP8.32□□□□□ -1.08
RFX3-202ENST00000358730 CHST14Q8NCH0 376 aa8.32□□□□□ -1.08
RFX3-202ENST00000358730 SCAMP4Q969E2 229 aa8.32□□□□□ -1.08
RFX3-202ENST00000358730 SH3KBP1Q96B97 665 aa8.32□□□□□ -1.08
RFX3-202ENST00000358730 TBC1D20Q96BZ9 403 aa8.32□□□□□ -1.08
RFX3-202ENST00000358730 MED8Q96G25 268 aa8.32□□□□□ -1.08
RFX3-202ENST00000358730 TPD52L3Q96J77 140 aa8.32□□□□□ -1.08
RFX3-202ENST00000358730 FCRL1Q96LA6 429 aa8.32□□□□□ -1.08
RFX3-202ENST00000358730 MAGEB10Q96LZ2 347 aaPredicted RBP8.32□□□□□ -1.08
RFX3-202ENST00000358730 EMILIN2Q9BXX0 1053 aa8.32□□□□□ -1.08
RFX3-202ENST00000358730 REEP1Q9H902 201 aa8.32□□□□□ -1.08
RFX3-202ENST00000358730 KRT84Q9NSB2 600 aa8.32□□□□□ -1.08
RFX3-202ENST00000358730 FAM120CQ9NX05 1096 aaKnown RBP8.32□□□□□ -1.08
RFX3-202ENST00000358730 VPS29Q9UBQ0 182 aa8.32□□□□□ -1.08
RFX3-202ENST00000358730 SLC25A13Q9UJS0 675 aa8.32□□□□□ -1.08
RFX3-202ENST00000358730 ERVW-1Q9UQF0 538 aa8.32□□□□□ -1.08
RFX3-202ENST00000358730 ERGIC3Q9Y282 383 aa8.32□□□□□ -1.08
RFX3-202ENST00000358730 ZNF510Q9Y2H8 683 aa8.32□□□□□ -1.08
RFX3-202ENST00000358730 PPIL1Q9Y3C6 166 aa8.32□□□□□ -1.08
RFX3-202ENST00000358730 PCDHGB1Q9Y5G3 927 aa8.32□□□□□ -1.08
RFX3-202ENST00000358730 PCDHGA10Q9Y5H3 936 aa8.32□□□□□ -1.08
RFX3-202ENST00000358730 TRAV19A0A0A6YYK7 116 aa8.31□□□□□ -1.08
RFX3-202ENST00000358730 A0A1W2PRU2 124 aa8.31□□□□□ -1.08
RFX3-202ENST00000358730 OR2AG2A6NM03 316 aa8.31□□□□□ -1.08
RFX3-202ENST00000358730 CLDN25C9JDP6 229 aa8.31□□□□□ -1.08
RFX3-202ENST00000358730 E7EQ34 232 aa8.31□□□□□ -1.08
RFX3-202ENST00000358730 TEX28O15482 410 aa8.31□□□□□ -1.08
RFX3-202ENST00000358730 PRMT3O60678 531 aa8.31□□□□□ -1.08
RFX3-202ENST00000358730 FAM20BO75063 409 aa8.31□□□□□ -1.08
RFX3-202ENST00000358730 SH3BGRLO75368 114 aa8.31□□□□□ -1.08
RFX3-202ENST00000358730 SULT1C4O75897 302 aa8.31□□□□□ -1.08
RFX3-202ENST00000358730 FUCA1P04066 466 aa8.31□□□□□ -1.08
RFX3-202ENST00000358730 SEMG1P04279 462 aa8.31□□□□□ -1.08
RFX3-202ENST00000358730 PCSK2P16519 638 aa8.31□□□□□ -1.08
RFX3-202ENST00000358730 GPX2P18283 190 aa8.31□□□□□ -1.08
RFX3-202ENST00000358730 EPHA2P29317 976 aa8.31□□□□□ -1.08
RFX3-202ENST00000358730 HNRNPFP52597 415 aaKnown RBP8.31□□□□□ -1.08
RFX3-202ENST00000358730 ABRQ12979 859 aa8.31□□□□□ -1.08
RFX3-202ENST00000358730 SMN1Q16637 294 aaKnown RBP8.31□□□□□ -1.08
RFX3-202ENST00000358730 PDE12Q6L8Q7 609 aaKnown RBP8.31□□□□□ -1.08
RFX3-202ENST00000358730 BTLAQ7Z6A9 289 aa8.31□□□□□ -1.08
RFX3-202ENST00000358730 SLCO6A1Q86UG4 719 aa8.31□□□□□ -1.08
RFX3-202ENST00000358730 P2RY8Q86VZ1 359 aa8.31□□□□□ -1.08
RFX3-202ENST00000358730 ZNF540Q8NDQ6 660 aa8.31□□□□□ -1.08
RFX3-202ENST00000358730 OR8J2Q8NGG1 315 aa8.31□□□□□ -1.08
RFX3-202ENST00000358730 NDNFQ8TB73 568 aa8.31□□□□□ -1.08
RFX3-202ENST00000358730 GLMNQ92990 594 aa8.31□□□□□ -1.08
RFX3-202ENST00000358730 ZNF347Q96SE7 839 aa8.31□□□□□ -1.08
RFX3-202ENST00000358730 HMG20AQ9NP66 347 aa8.31□□□□□ -1.08
RFX3-202ENST00000358730 THUMPD1Q9NXG2 353 aaKnown RBP8.31□□□□□ -1.08
RFX3-202ENST00000358730 B3GNT3Q9Y2A9 372 aa8.31□□□□□ -1.08
RFX3-202ENST00000358730 SH3GLB1Q9Y371 365 aa8.31□□□□□ -1.08
RFX3-202ENST00000358730 FUOMA2VDF0 154 aa8.31□□□□□ -1.08
RFX3-202ENST00000358730 LEFTY2O00292 366 aa8.31□□□□□ -1.08
RFX3-202ENST00000358730 NRG2O14511 850 aaPredicted RBP8.31□□□□□ -1.08
RFX3-202ENST00000358730 KPNA5O15131 536 aa8.31□□□□□ -1.08
RFX3-202ENST00000358730 SLC22A1O15245 554 aa8.31□□□□□ -1.08
RFX3-202ENST00000358730 SCN2BO60939 215 aa8.31□□□□□ -1.08
RFX3-202ENST00000358730 JRKO75564 520 aa8.31□□□□□ -1.08
RFX3-202ENST00000358730 POP4O95707 220 aaKnown RBP8.31□□□□□ -1.08
RFX3-202ENST00000358730 MT-ND2P03891 347 aa8.31□□□□□ -1.08
RFX3-202ENST00000358730 LAMP1P11279 417 aa8.31□□□□□ -1.08
RFX3-202ENST00000358730 JUNDP17535 347 aa8.31□□□□□ -1.08
RFX3-202ENST00000358730 AQP1P29972 269 aa8.31□□□□□ -1.08
RFX3-202ENST00000358730 MASP1P48740 699 aa8.31□□□□□ -1.08
RFX3-202ENST00000358730 ITGA1P56199 1179 aa8.31□□□□□ -1.08
RFX3-202ENST00000358730 SLC7A9P82251 487 aa8.31□□□□□ -1.08
RFX3-202ENST00000358730 NOGQ13253 232 aa8.31□□□□□ -1.08
RFX3-202ENST00000358730 ZNF846Q147U1 533 aa8.31□□□□□ -1.08
RFX3-202ENST00000358730 ZNF648Q5T619 568 aaPredicted RBP8.31□□□□□ -1.08
RFX3-202ENST00000358730 KIAA1614Q5VZ46 1190 aa8.31□□□□□ -1.08
RFX3-202ENST00000358730 LIPJQ5W064 366 aa8.31□□□□□ -1.08
RFX3-202ENST00000358730 CBLL1Q75N03 491 aa8.31□□□□□ -1.08
RFX3-202ENST00000358730 EIF3MQ7L2H7 374 aaKnown RBP8.31□□□□□ -1.08
RFX3-202ENST00000358730 GPR155Q7Z3F1 870 aa8.31□□□□□ -1.08
RFX3-202ENST00000358730 THOC6Q86W42 341 aaKnown RBP8.31□□□□□ -1.08
RFX3-202ENST00000358730 PGBD3Q8N328 593 aa8.31□□□□□ -1.08
RFX3-202ENST00000358730 ASZ1Q8WWH4 475 aa8.31□□□□□ -1.08
RFX3-202ENST00000358730 SH3YL1Q96HL8 342 aaPredicted RBP8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms