RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 DNAJB11Q9UBS4 358 aa9.53□□□□□ -0.88
CHD3-202ENST00000358181 PCDHGB1Q9Y5G3 927 aa9.53□□□□□ -0.88
CHD3-202ENST00000358181 ABLIM1O14639 778 aa9.53□□□□□ -0.88
CHD3-202ENST00000358181 FNTBP49356 437 aa9.53□□□□□ -0.88
CHD3-202ENST00000358181 ZNF84P51523 738 aa9.53□□□□□ -0.88
CHD3-202ENST00000358181 PRKAA2P54646 552 aa9.53□□□□□ -0.88
CHD3-202ENST00000358181 DPYSL3Q14195 570 aa9.53□□□□□ -0.88
CHD3-202ENST00000358181 ZNF454Q8N9F8 522 aa9.53□□□□□ -0.88
CHD3-202ENST00000358181 OR56B2PQ8NGI1 322 aa9.53□□□□□ -0.88
CHD3-202ENST00000358181 SPATA22Q8NHS9 363 aa9.53□□□□□ -0.88
CHD3-202ENST00000358181 TRIB2Q92519 343 aa9.53□□□□□ -0.88
CHD3-202ENST00000358181 PPM1MQ96MI6 270 aa9.53□□□□□ -0.88
CHD3-202ENST00000358181 RBM14Q96PK6 669 aaKnown RBP9.53□□□□□ -0.88
CHD3-202ENST00000358181 CHST7Q9NS84 486 aa9.53□□□□□ -0.88
CHD3-202ENST00000358181 PCDHGA2Q9Y5H1 932 aa9.53□□□□□ -0.88
CHD3-202ENST00000358181 NRXN1Q9ULB1 1477 aa9.53□□□□□ -0.88
CHD3-202ENST00000358181 SMIM30A4D0T7 59 aa9.53□□□□□ -0.88
CHD3-202ENST00000358181 SELPP16109 830 aa9.53□□□□□ -0.88
CHD3-202ENST00000358181 PECAM1P16284 738 aaPredicted RBP9.53□□□□□ -0.88
CHD3-202ENST00000358181 GLRA2P23416 452 aa9.53□□□□□ -0.88
CHD3-202ENST00000358181 PTAFRP25105 342 aa9.53□□□□□ -0.88
CHD3-202ENST00000358181 DNM1P34Q6PK57 102 aa9.53□□□□□ -0.88
CHD3-202ENST00000358181 FRMD7Q6ZUT3 714 aa9.53□□□□□ -0.88
CHD3-202ENST00000358181 MKL1Q969V6 931 aa9.53□□□□□ -0.88
CHD3-202ENST00000358181 ZC3HAV1LQ96H79 300 aaKnown RBP9.53□□□□□ -0.88
CHD3-202ENST00000358181 MED11Q9P086 117 aa9.53□□□□□ -0.88
CHD3-202ENST00000358181 SPIN1Q9Y657 262 aaPredicted RBP9.53□□□□□ -0.88
CHD3-202ENST00000358181 ILVBLA1L0T0 632 aa9.53□□□□□ -0.88
CHD3-202ENST00000358181 APOL3O95236 402 aa9.53□□□□□ -0.88
CHD3-202ENST00000358181 RPS3AP61247 264 aaKnown RBP9.53□□□□□ -0.88
CHD3-202ENST00000358181 WDR26Q9H7D7 661 aa9.53□□□□□ -0.88
CHD3-202ENST00000358181 FAM237BA0A1B0GVD1 139 aa9.53□□□□□ -0.88
CHD3-202ENST00000358181 VILLO15195 856 aa9.53□□□□□ -0.88
CHD3-202ENST00000358181 RARAP10276 462 aa9.53□□□□□ -0.88
CHD3-202ENST00000358181 CLCN5P51795 746 aa9.53□□□□□ -0.88
CHD3-202ENST00000358181 TPTEP56180 551 aa9.53□□□□□ -0.88
CHD3-202ENST00000358181 NPRL3Q12980 569 aa9.53□□□□□ -0.88
CHD3-202ENST00000358181 ZACNQ401N2 412 aa9.53□□□□□ -0.88
CHD3-202ENST00000358181 ILDR1Q86SU0 546 aaPredicted RBP9.53□□□□□ -0.88
CHD3-202ENST00000358181 PDSS2Q86YH6 399 aa9.53□□□□□ -0.88
CHD3-202ENST00000358181 TIGD4Q8IY51 512 aa9.53□□□□□ -0.88
CHD3-202ENST00000358181 MYRFLQ96LU7 910 aa9.53□□□□□ -0.88
CHD3-202ENST00000358181 OR8D2Q9GZM6 311 aa9.53□□□□□ -0.88
CHD3-202ENST00000358181 NXF3Q9H4D5 531 aaKnown RBP9.53□□□□□ -0.88
CHD3-202ENST00000358181 PCYOX1Q9UHG3 505 aa9.53□□□□□ -0.88
CHD3-202ENST00000358181 TMEM98Q9Y2Y6 226 aa9.53□□□□□ -0.88
CHD3-202ENST00000358181 FER1L4A9Z1Z3 1794 aa9.52□□□□□ -0.88
CHD3-202ENST00000358181 A0A1W2PRU2 124 aa9.52□□□□□ -0.88
CHD3-202ENST00000358181 ACOT7O00154 380 aa9.52□□□□□ -0.88
CHD3-202ENST00000358181 CCL22O00626 93 aa9.52□□□□□ -0.88
CHD3-202ENST00000358181 ARRB1P49407 418 aaPredicted RBP9.52□□□□□ -0.88
CHD3-202ENST00000358181 ZNF81P51508 661 aa9.52□□□□□ -0.88
CHD3-202ENST00000358181 RPS15P62841 145 aaKnown RBP9.52□□□□□ -0.88
CHD3-202ENST00000358181 ECM1Q16610 540 aa9.52□□□□□ -0.88
CHD3-202ENST00000358181 OTOP3Q7RTS5 596 aa9.52□□□□□ -0.88
CHD3-202ENST00000358181 RFKQ969G6 155 aa9.52□□□□□ -0.88
CHD3-202ENST00000358181 CADM1Q9BY67 442 aaKnown RBP9.52□□□□□ -0.88
CHD3-202ENST00000358181 KCNH6Q9H252 994 aa9.52□□□□□ -0.88
CHD3-202ENST00000358181 KCNK13Q9HB14 408 aa9.52□□□□□ -0.88
CHD3-202ENST00000358181 FBXL12Q9NXK8 326 aa9.52□□□□□ -0.88
CHD3-202ENST00000358181 PLAGL2Q9UPG8 496 aa9.52□□□□□ -0.88
CHD3-202ENST00000358181 CNTNAP1P78357 1384 aa9.52□□□□□ -0.88
CHD3-202ENST00000358181 FAM221BA6H8Z2 402 aa9.52□□□□□ -0.89
CHD3-202ENST00000358181 CASC3O15234 703 aaKnown RBP9.52□□□□□ -0.89
CHD3-202ENST00000358181 FESP07332 822 aa9.52□□□□□ -0.89
CHD3-202ENST00000358181 EPHA3P29320 983 aa9.52□□□□□ -0.89
CHD3-202ENST00000358181 CPOXP36551 454 aa9.52□□□□□ -0.89
CHD3-202ENST00000358181 IL17AQ16552 155 aa9.52□□□□□ -0.89
CHD3-202ENST00000358181 PRRT3Q5FWE3 981 aa9.52□□□□□ -0.89
CHD3-202ENST00000358181 MSANTD3Q96H12 275 aa9.52□□□□□ -0.89
CHD3-202ENST00000358181 LRCH3Q96II8 777 aa9.52□□□□□ -0.89
CHD3-202ENST00000358181 BEX2Q9BXY8 128 aa9.52□□□□□ -0.89
CHD3-202ENST00000358181 BTBD1Q9H0C5 482 aa9.52□□□□□ -0.89
CHD3-202ENST00000358181 AGO3Q9H9G7 860 aaKnown RBP9.52□□□□□ -0.89
CHD3-202ENST00000358181 BEX1Q9HBH7 125 aa9.52□□□□□ -0.89
CHD3-202ENST00000358181 TM9SF3Q9HD45 589 aa9.52□□□□□ -0.89
CHD3-202ENST00000358181 DNAJC27Q9NZQ0 273 aa9.52□□□□□ -0.89
CHD3-202ENST00000358181 LAMP5Q9UJQ1 280 aa9.52□□□□□ -0.89
CHD3-202ENST00000358181 R3HDM2Q9Y2K5 976 aaKnown RBP9.52□□□□□ -0.89
CHD3-202ENST00000358181 SLC1A7O00341 560 aa9.52□□□□□ -0.89
CHD3-202ENST00000358181 CXCL11O14625 94 aa9.52□□□□□ -0.89
CHD3-202ENST00000358181 BCKDKO14874 412 aa9.52□□□□□ -0.89
CHD3-202ENST00000358181 CCNKO75909 580 aa9.52□□□□□ -0.89
CHD3-202ENST00000358181 TACSTD2P09758 323 aa9.52□□□□□ -0.89
CHD3-202ENST00000358181 AKR1C4P17516 323 aa9.52□□□□□ -0.89
CHD3-202ENST00000358181 VIPR1P32241 457 aa9.52□□□□□ -0.89
CHD3-202ENST00000358181 ST3GAL1Q11201 340 aa9.52□□□□□ -0.89
CHD3-202ENST00000358181 SLC10A1Q14973 349 aa9.52□□□□□ -0.89
CHD3-202ENST00000358181 PKDCCQ504Y2 493 aa9.52□□□□□ -0.89
CHD3-202ENST00000358181 OR52W1Q6IF63 320 aa9.52□□□□□ -0.89
CHD3-202ENST00000358181 PLET1Q6UQ28 207 aa9.52□□□□□ -0.89
CHD3-202ENST00000358181 SLC51AQ86UW1 340 aa9.52□□□□□ -0.89
CHD3-202ENST00000358181 OR52E4Q8NGH9 312 aa9.52□□□□□ -0.89
CHD3-202ENST00000358181 DOK4Q8TEW6 326 aa9.52□□□□□ -0.89
CHD3-202ENST00000358181 C3orf49Q96BT1 292 aa9.52□□□□□ -0.89
CHD3-202ENST00000358181 CAPNS2Q96L46 248 aa9.52□□□□□ -0.89
CHD3-202ENST00000358181 RANBP3Q9H6Z4 567 aaPredicted RBP9.52□□□□□ -0.89
CHD3-202ENST00000358181 ASB6Q9NWX5 421 aa9.52□□□□□ -0.89
CHD3-202ENST00000358181 SALL1Q9NSC2 1324 aa9.52□□□□□ -0.89
CHD3-202ENST00000358181 ITGA10O75578 1167 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms