RNA–Protein interactions for RNA: ENST00000357732.8

RTN4-204, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,390 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-204ENST00000357732 HIST1H2AHQ96KK5 128 aa17.17■□□□□ 0.34
RTN4-204ENST00000357732 HIST1H2AJQ99878 128 aa17.17■□□□□ 0.34
RTN4-204ENST00000357732 H2AFJQ9BTM1 129 aa17.17■□□□□ 0.34
RTN4-204ENST00000357732 HERC2P3Q9BVR0 1158 aa17.17■□□□□ 0.34
RTN4-204ENST00000357732 KLF16Q9BXK1 252 aaPredicted RBP17.17■□□□□ 0.34
RTN4-204ENST00000357732 ALOXE3Q9BYJ1 711 aa17.17■□□□□ 0.34
RTN4-204ENST00000357732 KLHL25Q9H0H3 589 aa17.17■□□□□ 0.34
RTN4-204ENST00000357732 ZDHHC3Q9NYG2 299 aa17.17■□□□□ 0.34
RTN4-204ENST00000357732 VPS51Q9UID3 782 aa17.17■□□□□ 0.34
RTN4-204ENST00000357732 ZNF229Q9UJW7 825 aa17.17■□□□□ 0.34
RTN4-204ENST00000357732 AIREO43918 545 aa17.16■□□□□ 0.34
RTN4-204ENST00000357732 PCDHGA12O60330 932 aa17.16■□□□□ 0.34
RTN4-204ENST00000357732 TSPAN3O60637 253 aa17.16■□□□□ 0.34
RTN4-204ENST00000357732 ABCB1P08183 1280 aaPredicted RBP17.16■□□□□ 0.34
RTN4-204ENST00000357732 PRKAR2AP13861 404 aaKnown RBP17.16■□□□□ 0.34
RTN4-204ENST00000357732 PRKCDQ05655 676 aa17.16■□□□□ 0.34
RTN4-204ENST00000357732 DEPDC1Q5TB30 811 aa17.16■□□□□ 0.34
RTN4-204ENST00000357732 FRG2Q64ET8 278 aa17.16■□□□□ 0.34
RTN4-204ENST00000357732 RETSATQ6NUM9 610 aa17.16■□□□□ 0.34
RTN4-204ENST00000357732 AHSA2Q719I0 299 aa17.16■□□□□ 0.34
RTN4-204ENST00000357732 SYNPOQ8N3V7 929 aa17.16■□□□□ 0.34
RTN4-204ENST00000357732 KBTBD8Q8NFY9 601 aa17.16■□□□□ 0.34
RTN4-204ENST00000357732 APH1BQ8WW43 257 aa17.16■□□□□ 0.34
RTN4-204ENST00000357732 FRG2BQ96QU4 278 aa17.16■□□□□ 0.34
RTN4-204ENST00000357732 COPS4Q9BT78 406 aa17.16■□□□□ 0.34
RTN4-204ENST00000357732 TTPALQ9BTX7 342 aa17.16■□□□□ 0.34
RTN4-204ENST00000357732 REXO4Q9GZR2 422 aaKnown RBP17.16■□□□□ 0.34
RTN4-204ENST00000357732 FKBP14Q9NWM8 211 aa17.16■□□□□ 0.34
RTN4-204ENST00000357732 PSORS1C1Q9UIG5 152 aa17.16■□□□□ 0.34
RTN4-204ENST00000357732 FCF1Q9Y324 198 aaKnown RBP17.16■□□□□ 0.34
RTN4-204ENST00000357732 HTTP42858 3142 aa17.16■□□□□ 0.34
RTN4-204ENST00000357732 A8MVJ9 347 aa17.16■□□□□ 0.34
RTN4-204ENST00000357732 hCG_2039718K7EN88 272 aa17.16■□□□□ 0.34
RTN4-204ENST00000357732 SCN2BO60939 215 aa17.16■□□□□ 0.34
RTN4-204ENST00000357732 MPC1LP0DKB6 136 aa17.16■□□□□ 0.34
RTN4-204ENST00000357732 PABPC1P11940 636 aaKnown RBP17.16■□□□□ 0.34
RTN4-204ENST00000357732 ELNP15502 786 aa17.16■□□□□ 0.34
RTN4-204ENST00000357732 MZF1P28698 734 aaPredicted RBP17.16■□□□□ 0.34
RTN4-204ENST00000357732 CTSKP43235 329 aa17.16■□□□□ 0.34
RTN4-204ENST00000357732 AP1S2P56377 157 aa17.16■□□□□ 0.34
RTN4-204ENST00000357732 CD300CQ08708 224 aa17.16■□□□□ 0.34
RTN4-204ENST00000357732 LRRC74AQ0VAA2 488 aa17.16■□□□□ 0.34
RTN4-204ENST00000357732 CHRNA6Q15825 494 aa17.16■□□□□ 0.34
RTN4-204ENST00000357732 SMN1Q16637 294 aaKnown RBP17.16■□□□□ 0.34
RTN4-204ENST00000357732 TOR1AIP1Q5JTV8 583 aa17.16■□□□□ 0.34
RTN4-204ENST00000357732 ATXN7L2Q5T6C5 722 aaPredicted RBP17.16■□□□□ 0.34
RTN4-204ENST00000357732 PNCKQ6P2M8 343 aa17.16■□□□□ 0.34
RTN4-204ENST00000357732 TAS1R1Q7RTX1 841 aa17.16■□□□□ 0.34
RTN4-204ENST00000357732 CCDC71Q8IV32 467 aaPredicted RBP17.16■□□□□ 0.34
RTN4-204ENST00000357732 OR10Q1Q8NGQ4 319 aa17.16■□□□□ 0.34
RTN4-204ENST00000357732 C7orf34Q96L11 122 aa17.16■□□□□ 0.34
RTN4-204ENST00000357732 ADPRHL2Q9NX46 363 aa17.16■□□□□ 0.34
RTN4-204ENST00000357732 RNF6Q9Y252 685 aa17.16■□□□□ 0.34
RTN4-204ENST00000357732 PCDHB11Q9Y5F2 797 aa17.16■□□□□ 0.34
RTN4-204ENST00000357732 PCDHGA6Q9Y5G7 932 aa17.16■□□□□ 0.34
RTN4-204ENST00000357732 SCAMP3O14828 347 aaKnown RBP17.15■□□□□ 0.34
RTN4-204ENST00000357732 NUAK1O60285 661 aa17.15■□□□□ 0.34
RTN4-204ENST00000357732 MYO1DO94832 1006 aa17.15■□□□□ 0.34
RTN4-204ENST00000357732 CA5AP35218 305 aa17.15■□□□□ 0.34
RTN4-204ENST00000357732 SLC11A1P49279 550 aa17.15■□□□□ 0.34
RTN4-204ENST00000357732 OLR1P78380 273 aa17.15■□□□□ 0.34
RTN4-204ENST00000357732 CREMQ03060 361 aa17.15■□□□□ 0.34
RTN4-204ENST00000357732 TEAD4Q15561 434 aa17.15■□□□□ 0.34
RTN4-204ENST00000357732 IQCCQ4KMZ1 466 aa17.15■□□□□ 0.34
RTN4-204ENST00000357732 SLC8B1Q6J4K2 584 aa17.15■□□□□ 0.34
RTN4-204ENST00000357732 RGMBQ6NW40 437 aa17.15■□□□□ 0.34
RTN4-204ENST00000357732 PRSS55Q6UWB4 352 aaPredicted RBP17.15■□□□□ 0.34
RTN4-204ENST00000357732 UBE2R2Q712K3 238 aaPredicted RBP17.15■□□□□ 0.34
RTN4-204ENST00000357732 PSMA8Q8TAA3 256 aa17.15■□□□□ 0.34
RTN4-204ENST00000357732 CHTF18Q8WVB6 975 aa17.15■□□□□ 0.34
RTN4-204ENST00000357732 APIPQ96GX9 242 aa17.15■□□□□ 0.34
RTN4-204ENST00000357732 RAD9AQ99638 391 aa17.15■□□□□ 0.34
RTN4-204ENST00000357732 TMEM175Q9BSA9 504 aa17.15■□□□□ 0.34
RTN4-204ENST00000357732 C2orf49Q9BVC5 232 aaPredicted RBP17.15■□□□□ 0.34
RTN4-204ENST00000357732 GKN1Q9NS71 199 aa17.15■□□□□ 0.34
RTN4-204ENST00000357732 RPLP0P05388 317 aaKnown RBP17.15■□□□□ 0.34
RTN4-204ENST00000357732 LCKP06239 509 aa17.15■□□□□ 0.34
RTN4-204ENST00000357732 JUPP14923 745 aa17.15■□□□□ 0.34
RTN4-204ENST00000357732 HNF1BP35680 557 aa17.15■□□□□ 0.34
RTN4-204ENST00000357732 GGT2P36268 569 aa17.15■□□□□ 0.34
RTN4-204ENST00000357732 ACLYP53396 1101 aa17.15■□□□□ 0.34
RTN4-204ENST00000357732 ELOAQ14241 798 aaKnown RBP17.15■□□□□ 0.34
RTN4-204ENST00000357732 LAPTM4AQ15012 233 aa17.15■□□□□ 0.34
RTN4-204ENST00000357732 CATSPEREQ5SY80 951 aa17.15■□□□□ 0.34
RTN4-204ENST00000357732 LIPJQ5W064 366 aa17.15■□□□□ 0.34
RTN4-204ENST00000357732 ZDHHC20Q5W0Z9 365 aa17.15■□□□□ 0.34
RTN4-204ENST00000357732 MBOAT1Q6ZNC8 495 aa17.15■□□□□ 0.34
RTN4-204ENST00000357732 SYT12Q8IV01 421 aa17.15■□□□□ 0.34
RTN4-204ENST00000357732 TTC16Q8NEE8 873 aa17.15■□□□□ 0.34
RTN4-204ENST00000357732 ALG14Q96F25 216 aa17.15■□□□□ 0.34
RTN4-204ENST00000357732 APOLD1Q96LR9 279 aa17.15■□□□□ 0.34
RTN4-204ENST00000357732 CTRCQ99895 268 aa17.15■□□□□ 0.34
RTN4-204ENST00000357732 MOV10Q9HCE1 1003 aaKnown RBP17.15■□□□□ 0.34
RTN4-204ENST00000357732 ERVK-11Q9UQG0 969 aa17.15■□□□□ 0.34
RTN4-204ENST00000357732 TESMINQ9Y4I5 508 aa17.15■□□□□ 0.34
RTN4-204ENST00000357732 ADAMDEC1O15204 470 aa17.14■□□□□ 0.33
RTN4-204ENST00000357732 TBL1XO60907 577 aa17.14■□□□□ 0.33
RTN4-204ENST00000357732 SNX4O95219 450 aa17.14■□□□□ 0.33
RTN4-204ENST00000357732 CLDN7O95471 211 aa17.14■□□□□ 0.33
RTN4-204ENST00000357732 OR56A5P0C7T3 313 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms