RNA–Protein interactions for RNA: ENST00000355530.6

SPNS3-201, Transcript of sphingolipid transporter 3 (putative), humanhuman

APPRIS P1 TSL 2 BASIC

Gene SPNS3, Length 2,133 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS3-201ENST00000355530 LSM7Q9UK45 103 aaKnown RBP17.68■□□□□ 0.42
SPNS3-201ENST00000355530 SLC22A14Q9Y267 594 aa17.68■□□□□ 0.42
SPNS3-201ENST00000355530 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.68■□□□□ 0.42
SPNS3-201ENST00000355530 COX7A2P14406 83 aa17.68■□□□□ 0.42
SPNS3-201ENST00000355530 KRT20P35900 424 aa17.68■□□□□ 0.42
SPNS3-201ENST00000355530 HALP42357 657 aa17.68■□□□□ 0.42
SPNS3-201ENST00000355530 WNT3P56703 355 aa17.68■□□□□ 0.42
SPNS3-201ENST00000355530 C21orf58P58505 322 aa17.68■□□□□ 0.42
SPNS3-201ENST00000355530 ZXDBP98169 803 aa17.68■□□□□ 0.42
SPNS3-201ENST00000355530 LMAN2Q12907 356 aa17.68■□□□□ 0.42
SPNS3-201ENST00000355530 VEZF1Q14119 521 aa17.68■□□□□ 0.42
SPNS3-201ENST00000355530 DGKKQ5KSL6 1271 aa17.68■□□□□ 0.42
SPNS3-201ENST00000355530 PLEKHS1Q5SXH7 462 aa17.68■□□□□ 0.42
SPNS3-201ENST00000355530 FAHD1Q6P587 224 aa17.68■□□□□ 0.42
SPNS3-201ENST00000355530 ATG16L2Q8NAA4 619 aa17.68■□□□□ 0.42
SPNS3-201ENST00000355530 STARD8Q92502 1023 aa17.68■□□□□ 0.42
SPNS3-201ENST00000355530 ECHDC3Q96DC8 303 aa17.68■□□□□ 0.42
SPNS3-201ENST00000355530 IGSF21Q96ID5 467 aa17.68■□□□□ 0.42
SPNS3-201ENST00000355530 MCCC1Q96RQ3 725 aaPredicted RBP17.68■□□□□ 0.42
SPNS3-201ENST00000355530 ABCG8Q9H221 673 aa17.68■□□□□ 0.42
SPNS3-201ENST00000355530 GFYI3L273 518 aa17.67■□□□□ 0.42
SPNS3-201ENST00000355530 PRRG1O14668 218 aa17.67■□□□□ 0.42
SPNS3-201ENST00000355530 UGDHO60701 494 aa17.67■□□□□ 0.42
SPNS3-201ENST00000355530 SCN2BO60939 215 aa17.67■□□□□ 0.42
SPNS3-201ENST00000355530 DIRAS1O95057 198 aa17.67■□□□□ 0.42
SPNS3-201ENST00000355530 FKBP9O95302 570 aa17.67■□□□□ 0.42
SPNS3-201ENST00000355530 ALOX5P09917 674 aa17.67■□□□□ 0.42
SPNS3-201ENST00000355530 ITPKAP23677 461 aa17.67■□□□□ 0.42
SPNS3-201ENST00000355530 MAGEA8P43361 318 aa17.67■□□□□ 0.42
SPNS3-201ENST00000355530 VBP1P61758 197 aa17.67■□□□□ 0.42
SPNS3-201ENST00000355530 SNRPD1P62314 119 aaKnown RBP17.67■□□□□ 0.42
SPNS3-201ENST00000355530 SEMG2Q02383 582 aa17.67■□□□□ 0.42
SPNS3-201ENST00000355530 CHIT1Q13231 466 aa17.67■□□□□ 0.42
SPNS3-201ENST00000355530 DGCR6Q14129 220 aa17.67■□□□□ 0.42
SPNS3-201ENST00000355530 PLEKHG6Q3KR16 790 aa17.67■□□□□ 0.42
SPNS3-201ENST00000355530 ZNF621Q6ZSS3 439 aa17.67■□□□□ 0.42
SPNS3-201ENST00000355530 GALNT10Q86SR1 603 aa17.67■□□□□ 0.42
SPNS3-201ENST00000355530 ZIC5Q96T25 663 aa17.67■□□□□ 0.42
SPNS3-201ENST00000355530 EPS8L2Q9H6S3 715 aa17.67■□□□□ 0.42
SPNS3-201ENST00000355530 THUMPD1Q9NXG2 353 aaKnown RBP17.67■□□□□ 0.42
SPNS3-201ENST00000355530 KIAA1522Q9P206 1035 aaPredicted RBP17.67■□□□□ 0.42
SPNS3-201ENST00000355530 AASSQ9UDR5 926 aa17.67■□□□□ 0.42
SPNS3-201ENST00000355530 PPIL1Q9Y3C6 166 aa17.67■□□□□ 0.42
SPNS3-201ENST00000355530 KRBA1A5PL33 1030 aa17.66■□□□□ 0.42
SPNS3-201ENST00000355530 PRAMEF4O60810 478 aa17.66■□□□□ 0.42
SPNS3-201ENST00000355530 C9P02748 559 aa17.66■□□□□ 0.42
SPNS3-201ENST00000355530 LHCGRP22888 699 aa17.66■□□□□ 0.42
SPNS3-201ENST00000355530 ALDH4A1P30038 563 aa17.66■□□□□ 0.42
SPNS3-201ENST00000355530 PTSQ03393 145 aa17.66■□□□□ 0.42
SPNS3-201ENST00000355530 MPP7Q5T2T1 576 aa17.66■□□□□ 0.42
SPNS3-201ENST00000355530 PRAMEF9Q5VWM5 478 aa17.66■□□□□ 0.42
SPNS3-201ENST00000355530 LIPJQ5W064 366 aa17.66■□□□□ 0.42
SPNS3-201ENST00000355530 OR6Q1Q8NGQ2 317 aa17.66■□□□□ 0.42
SPNS3-201ENST00000355530 P2RY13Q9BPV8 354 aa17.66■□□□□ 0.42
SPNS3-201ENST00000355530 AP1M2Q9Y6Q5 423 aa17.66■□□□□ 0.42
SPNS3-201ENST00000355530 TMEM247A6NEH6 219 aa17.66■□□□□ 0.42
SPNS3-201ENST00000355530 C1QCP02747 245 aa17.66■□□□□ 0.42
SPNS3-201ENST00000355530 EFNA1P20827 205 aaPredicted RBP17.66■□□□□ 0.42
SPNS3-201ENST00000355530 RPS3AP61247 264 aaKnown RBP17.66■□□□□ 0.42
SPNS3-201ENST00000355530 LSM3P62310 102 aaKnown RBP17.66■□□□□ 0.42
SPNS3-201ENST00000355530 CSNK2BP67870 215 aa17.66■□□□□ 0.42
SPNS3-201ENST00000355530 FADDQ13158 208 aa17.66■□□□□ 0.42
SPNS3-201ENST00000355530 SMN1Q16637 294 aaKnown RBP17.66■□□□□ 0.42
SPNS3-201ENST00000355530 VRK3Q8IV63 474 aa17.66■□□□□ 0.42
SPNS3-201ENST00000355530 VOPP1Q96AW1 172 aa17.66■□□□□ 0.42
SPNS3-201ENST00000355530 SIGLEC11Q96RL6 698 aa17.66■□□□□ 0.42
SPNS3-201ENST00000355530 EPYCQ99645 322 aa17.66■□□□□ 0.42
SPNS3-201ENST00000355530 RHNO1Q9BSD3 238 aa17.66■□□□□ 0.42
SPNS3-201ENST00000355530 ANKHQ9HCJ1 492 aa17.66■□□□□ 0.42
SPNS3-201ENST00000355530 RUVBL1Q9Y265 456 aaKnown RBP17.66■□□□□ 0.42
SPNS3-201ENST00000355530 PMF1-BGLAPU3KQ54 211 aa17.66■□□□□ 0.42
SPNS3-201ENST00000355530 KPNA5O15131 536 aa17.65■□□□□ 0.42
SPNS3-201ENST00000355530 ADAM23O75077 832 aa17.65■□□□□ 0.42
SPNS3-201ENST00000355530 BMP4P12644 408 aa17.65■□□□□ 0.42
SPNS3-201ENST00000355530 EPHA2P29317 976 aa17.65■□□□□ 0.42
SPNS3-201ENST00000355530 CD70P32970 193 aa17.65■□□□□ 0.42
SPNS3-201ENST00000355530 EPHB3P54753 998 aa17.65■□□□□ 0.42
SPNS3-201ENST00000355530 NCS1P62166 190 aa17.65■□□□□ 0.42
SPNS3-201ENST00000355530 NPRL3Q12980 569 aa17.65■□□□□ 0.42
SPNS3-201ENST00000355530 CAMK2GQ13555 558 aaPredicted RBP17.65■□□□□ 0.42
SPNS3-201ENST00000355530 INAQ16352 499 aa17.65■□□□□ 0.42
SPNS3-201ENST00000355530 HIST2H2ACQ16777 129 aaPredicted RBP17.65■□□□□ 0.42
SPNS3-201ENST00000355530 MPPE1Q53F39 396 aa17.65■□□□□ 0.42
SPNS3-201ENST00000355530 PERM1Q5SV97 790 aa17.65■□□□□ 0.42
SPNS3-201ENST00000355530 TXNDC8Q6A555 127 aa17.65■□□□□ 0.42
SPNS3-201ENST00000355530 SYNPOQ8N3V7 929 aa17.65■□□□□ 0.42
SPNS3-201ENST00000355530 CPXM2Q8N436 756 aa17.65■□□□□ 0.42
SPNS3-201ENST00000355530 DPH2Q9BQC3 489 aaPredicted RBP17.65■□□□□ 0.42
SPNS3-201ENST00000355530 GABARAPL3Q9BY60 117 aa17.65■□□□□ 0.42
SPNS3-201ENST00000355530 SUV39H2Q9H5I1 410 aa17.65■□□□□ 0.42
SPNS3-201ENST00000355530 ZNF334Q9HCZ1 680 aaPredicted RBP17.65■□□□□ 0.42
SPNS3-201ENST00000355530 VPS29Q9UBQ0 182 aa17.65■□□□□ 0.42
SPNS3-201ENST00000355530 CORO2BQ9UQ03 480 aa17.65■□□□□ 0.42
SPNS3-201ENST00000355530 PCDHB11Q9Y5F2 797 aa17.65■□□□□ 0.42
SPNS3-201ENST00000355530 OR2A25A4D2G3 310 aa17.65■□□□□ 0.42
SPNS3-201ENST00000355530 TMEM221A6NGB7 291 aa17.65■□□□□ 0.42
SPNS3-201ENST00000355530 CLDN24A6NM45 220 aa17.65■□□□□ 0.42
SPNS3-201ENST00000355530 E9PQ18 207 aa17.65■□□□□ 0.42
SPNS3-201ENST00000355530 ALDH1A1P00352 501 aa17.65■□□□□ 0.42
SPNS3-201ENST00000355530 SOD2P04179 222 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms