RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 CLDN15P56746 228 aa1.54□□□□□ -2.16
BRCA1-202ENST00000354071 DLK1P80370 383 aa1.54□□□□□ -2.16
BRCA1-202ENST00000354071 MTX1Q13505 466 aa1.54□□□□□ -2.16
BRCA1-202ENST00000354071 TAF7Q15545 349 aaPredicted RBP1.54□□□□□ -2.16
BRCA1-202ENST00000354071 UGCGQ16739 394 aa1.54□□□□□ -2.16
BRCA1-202ENST00000354071 WASHC2DQ5SRD0 308 aa1.54□□□□□ -2.16
BRCA1-202ENST00000354071 FRG2Q64ET8 278 aa1.54□□□□□ -2.16
BRCA1-202ENST00000354071 ZNF770Q6IQ21 691 aaPredicted RBP1.54□□□□□ -2.16
BRCA1-202ENST00000354071 CASC1Q6TDU7 716 aa1.54□□□□□ -2.16
BRCA1-202ENST00000354071 ZNF813Q6ZN06 617 aa1.54□□□□□ -2.16
BRCA1-202ENST00000354071 BATF2Q8N1L9 274 aa1.54□□□□□ -2.16
BRCA1-202ENST00000354071 ZNF611Q8N823 705 aa1.54□□□□□ -2.16
BRCA1-202ENST00000354071 C7orf57Q8NEG2 295 aa1.54□□□□□ -2.16
BRCA1-202ENST00000354071 KBTBD8Q8NFY9 601 aa1.54□□□□□ -2.16
BRCA1-202ENST00000354071 RNF128Q8TEB7 428 aa1.54□□□□□ -2.16
BRCA1-202ENST00000354071 RNF139Q8WU17 664 aa1.54□□□□□ -2.16
BRCA1-202ENST00000354071 MOAP1Q96BY2 351 aa1.54□□□□□ -2.16
BRCA1-202ENST00000354071 MRPL53Q96EL3 112 aaKnown RBP1.54□□□□□ -2.16
BRCA1-202ENST00000354071 UROC1Q96N76 676 aa1.54□□□□□ -2.16
BRCA1-202ENST00000354071 SIGLEC11Q96RL6 698 aa1.54□□□□□ -2.16
BRCA1-202ENST00000354071 JPH2Q9BR39 696 aaPredicted RBP1.54□□□□□ -2.16
BRCA1-202ENST00000354071 TMEM161AQ9NX61 479 aa1.54□□□□□ -2.16
BRCA1-202ENST00000354071 IL20RAQ9UHF4 553 aa1.54□□□□□ -2.16
BRCA1-202ENST00000354071 ITSN2Q9NZM3 1697 aa1.54□□□□□ -2.16
BRCA1-202ENST00000354071 ZNF335Q9H4Z2 1342 aaPredicted RBP1.54□□□□□ -2.16
BRCA1-202ENST00000354071 LDB3O75112 727 aa1.54□□□□□ -2.16
BRCA1-202ENST00000354071 SNX4O95219 450 aa1.54□□□□□ -2.16
BRCA1-202ENST00000354071 MBD3O95983 291 aa1.54□□□□□ -2.16
BRCA1-202ENST00000354071 HMBSP08397 361 aa1.54□□□□□ -2.16
BRCA1-202ENST00000354071 CTSAP10619 480 aa1.54□□□□□ -2.16
BRCA1-202ENST00000354071 F3P13726 295 aa1.54□□□□□ -2.16
BRCA1-202ENST00000354071 GNLYP22749 145 aa1.54□□□□□ -2.16
BRCA1-202ENST00000354071 KELP23276 732 aa1.54□□□□□ -2.16
BRCA1-202ENST00000354071 PIK3R1P27986 724 aa1.54□□□□□ -2.16
BRCA1-202ENST00000354071 CACNA2D1P54289 1103 aa1.54□□□□□ -2.16
BRCA1-202ENST00000354071 ABATP80404 500 aa1.54□□□□□ -2.16
BRCA1-202ENST00000354071 CDH18Q13634 790 aa1.54□□□□□ -2.16
BRCA1-202ENST00000354071 KRT31Q15323 416 aa1.54□□□□□ -2.16
BRCA1-202ENST00000354071 INPP5JQ15735 1006 aaPredicted RBP1.54□□□□□ -2.16
BRCA1-202ENST00000354071 FAM69BQ5VUD6 431 aa1.54□□□□□ -2.16
BRCA1-202ENST00000354071 CES4AQ5XG92 561 aa1.54□□□□□ -2.16
BRCA1-202ENST00000354071 IRGCQ6NXR0 463 aa1.54□□□□□ -2.16
BRCA1-202ENST00000354071 CORO6Q6QEF8 472 aa1.54□□□□□ -2.16
BRCA1-202ENST00000354071 MON1BQ7L1V2 547 aa1.54□□□□□ -2.16
BRCA1-202ENST00000354071 GPR180Q86V85 440 aa1.54□□□□□ -2.16
BRCA1-202ENST00000354071 SATL1Q86VE3 508 aa1.54□□□□□ -2.16
BRCA1-202ENST00000354071 TMEM126BQ8IUX1 230 aa1.54□□□□□ -2.16
BRCA1-202ENST00000354071 C9orf43Q8TAL5 461 aaPredicted RBP1.54□□□□□ -2.16
BRCA1-202ENST00000354071 WASF1Q92558 559 aa1.54□□□□□ -2.16
BRCA1-202ENST00000354071 CCDC51Q96ER9 411 aa1.54□□□□□ -2.16
BRCA1-202ENST00000354071 TXNDC15Q96J42 360 aa1.54□□□□□ -2.16
BRCA1-202ENST00000354071 CLMNQ96JQ2 1002 aa1.54□□□□□ -2.16
BRCA1-202ENST00000354071 TAAR6Q96RI8 345 aa1.54□□□□□ -2.16
BRCA1-202ENST00000354071 SEPHS2Q99611 448 aa1.54□□□□□ -2.16
BRCA1-202ENST00000354071 TIMP4Q99727 224 aa1.54□□□□□ -2.16
BRCA1-202ENST00000354071 TEX13AQ9BXU3 409 aaPredicted RBP1.54□□□□□ -2.16
BRCA1-202ENST00000354071 TMEM39BQ9GZU3 492 aa1.54□□□□□ -2.16
BRCA1-202ENST00000354071 R3HDMLQ9H3Y0 253 aa1.54□□□□□ -2.16
BRCA1-202ENST00000354071 MAGIXQ9H6Y5 334 aa1.54□□□□□ -2.16
BRCA1-202ENST00000354071 AURKAIP1Q9NWT8 199 aaPredicted RBP1.54□□□□□ -2.16
BRCA1-202ENST00000354071 OCIAD1Q9NX40 245 aa1.54□□□□□ -2.16
BRCA1-202ENST00000354071 SLCO1C1Q9NYB5 712 aa1.54□□□□□ -2.16
BRCA1-202ENST00000354071 VPS18Q9P253 973 aa1.54□□□□□ -2.16
BRCA1-202ENST00000354071 ANKMY1Q9P2S6 941 aa1.54□□□□□ -2.16
BRCA1-202ENST00000354071 EPS15L1Q9UBC2 864 aa1.54□□□□□ -2.16
BRCA1-202ENST00000354071 SH3GLB1Q9Y371 365 aa1.54□□□□□ -2.16
BRCA1-202ENST00000354071 RNF115Q9Y4L5 304 aa1.54□□□□□ -2.16
BRCA1-202ENST00000354071 RIPK3Q9Y572 518 aa1.54□□□□□ -2.16
BRCA1-202ENST00000354071 SLC4A4Q9Y6R1 1079 aa1.54□□□□□ -2.16
BRCA1-202ENST00000354071 MAST1Q9Y2H9 1570 aa1.54□□□□□ -2.16
BRCA1-202ENST00000354071 UBR4Q5T4S7 5183 aa1.54□□□□□ -2.16
BRCA1-202ENST00000354071 COL4A5P29400 1685 aa1.54□□□□□ -2.16
BRCA1-202ENST00000354071 KBTBD13C9JR72 458 aa1.54□□□□□ -2.16
BRCA1-202ENST00000354071 INAFM1C9JVW0 142 aa1.54□□□□□ -2.16
BRCA1-202ENST00000354071 H0YCG3 227 aa1.54□□□□□ -2.16
BRCA1-202ENST00000354071 FPGTO14772 594 aa1.54□□□□□ -2.16
BRCA1-202ENST00000354071 MYZAPP0CAP1 466 aa1.54□□□□□ -2.16
BRCA1-202ENST00000354071 PRG2P13727 222 aa1.54□□□□□ -2.16
BRCA1-202ENST00000354071 DARSP14868 501 aaKnown RBP1.54□□□□□ -2.16
BRCA1-202ENST00000354071 CYP2A7P20853 494 aa1.54□□□□□ -2.16
BRCA1-202ENST00000354071 PCMT1P22061 227 aa1.54□□□□□ -2.16
BRCA1-202ENST00000354071 SRD5A2P31213 254 aa1.54□□□□□ -2.16
BRCA1-202ENST00000354071 STX2P32856 288 aa1.54□□□□□ -2.16
BRCA1-202ENST00000354071 RPL3P39023 403 aaKnown RBP1.54□□□□□ -2.16
BRCA1-202ENST00000354071 MFAP3P55082 362 aa1.54□□□□□ -2.16
BRCA1-202ENST00000354071 FOXE3Q13461 319 aa1.54□□□□□ -2.16
BRCA1-202ENST00000354071 CDO1Q16878 200 aa1.54□□□□□ -2.16
BRCA1-202ENST00000354071 LIPKQ5VXJ0 399 aa1.54□□□□□ -2.16
BRCA1-202ENST00000354071 FCRLBQ6BAA4 426 aa1.54□□□□□ -2.16
BRCA1-202ENST00000354071 PRR27Q6MZM9 219 aa1.54□□□□□ -2.16
BRCA1-202ENST00000354071 MIS18BP1Q6P0N0 1132 aa1.54□□□□□ -2.16
BRCA1-202ENST00000354071 NOTUMQ6P988 496 aa1.54□□□□□ -2.16
BRCA1-202ENST00000354071 CES3Q6UWW8 571 aa1.54□□□□□ -2.16
BRCA1-202ENST00000354071 LPCAT2Q7L5N7 544 aa1.54□□□□□ -2.16
BRCA1-202ENST00000354071 RELL2Q8NC24 303 aaPredicted RBP1.54□□□□□ -2.16
BRCA1-202ENST00000354071 DVL3Q92997 716 aaPredicted RBP1.54□□□□□ -2.16
BRCA1-202ENST00000354071 CDKN2AIPNLQ96HQ2 116 aa1.54□□□□□ -2.16
BRCA1-202ENST00000354071 ZNF583Q96ND8 569 aa1.54□□□□□ -2.16
BRCA1-202ENST00000354071 TTC25Q96NG3 672 aa1.54□□□□□ -2.16
BRCA1-202ENST00000354071 RASL10BQ96S79 203 aa1.54□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms