RNA–Protein interactions for RNA: ENST00000353411.10

SKP1-202, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SKP1, Length 9,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-202ENST00000353411 KIAA1143Q96AT1 154 aaPredicted RBP4.91□□□□□ -1.62
SKP1-202ENST00000353411 ELMOD3Q96FG2 381 aa4.91□□□□□ -1.62
SKP1-202ENST00000353411 KIF12Q96FN5 646 aa4.91□□□□□ -1.62
SKP1-202ENST00000353411 SMARCD1Q96GM5 515 aa4.91□□□□□ -1.62
SKP1-202ENST00000353411 AP1S3Q96PC3 154 aa4.91□□□□□ -1.62
SKP1-202ENST00000353411 LGMNQ99538 433 aa4.91□□□□□ -1.62
SKP1-202ENST00000353411 PHB2Q99623 299 aa4.91□□□□□ -1.62
SKP1-202ENST00000353411 ZNF251Q9BRH9 671 aa4.91□□□□□ -1.62
SKP1-202ENST00000353411 MRPL45Q9BRJ2 306 aaKnown RBP4.91□□□□□ -1.62
SKP1-202ENST00000353411 DUSP16Q9BY84 665 aa4.91□□□□□ -1.62
SKP1-202ENST00000353411 TRPV4Q9HBA0 871 aa4.91□□□□□ -1.62
SKP1-202ENST00000353411 TLR8Q9NR97 1041 aaKnown RBP4.91□□□□□ -1.62
SKP1-202ENST00000353411 TMEM45AQ9NWC5 275 aa4.91□□□□□ -1.62
SKP1-202ENST00000353411 AHSPQ9NZD4 102 aa4.91□□□□□ -1.62
SKP1-202ENST00000353411 ZMYM5Q9UJ78 669 aa4.91□□□□□ -1.62
SKP1-202ENST00000353411 CEP290O15078 2479 aa4.91□□□□□ -1.62
SKP1-202ENST00000353411 POLR2AP24928 1970 aaKnown RBP4.91□□□□□ -1.62
SKP1-202ENST00000353411 AKAP6Q13023 2319 aa4.91□□□□□ -1.62
SKP1-202ENST00000353411 SLC43A1O75387 559 aa4.91□□□□□ -1.62
SKP1-202ENST00000353411 TMEM63AO94886 807 aa4.91□□□□□ -1.62
SKP1-202ENST00000353411 IFNA6P05013 189 aa4.91□□□□□ -1.62
SKP1-202ENST00000353411 RAPSNQ13702 412 aa4.91□□□□□ -1.62
SKP1-202ENST00000353411 CLEC6AQ6EIG7 209 aa4.91□□□□□ -1.62
SKP1-202ENST00000353411 ELP2Q6IA86 826 aa4.91□□□□□ -1.62
SKP1-202ENST00000353411 FAM122BQ7Z309 247 aa4.91□□□□□ -1.62
SKP1-202ENST00000353411 ZSWIM9Q86XI8 627 aa4.91□□□□□ -1.62
SKP1-202ENST00000353411 C11orf65Q8NCR3 313 aa4.91□□□□□ -1.62
SKP1-202ENST00000353411 ANKK1Q8NFD2 765 aa4.91□□□□□ -1.62
SKP1-202ENST00000353411 OR10Z1Q8NGY1 313 aa4.91□□□□□ -1.62
SKP1-202ENST00000353411 LRRC46Q96FV0 321 aa4.91□□□□□ -1.62
SKP1-202ENST00000353411 RBM38Q9H0Z9 239 aaKnown RBP4.91□□□□□ -1.62
SKP1-202ENST00000353411 POPDC2Q9HBU9 364 aa4.91□□□□□ -1.62
SKP1-202ENST00000353411 RBFOX1Q9NWB1 397 aaKnown RBP4.91□□□□□ -1.62
SKP1-202ENST00000353411 MOCS1Q9NZB8 636 aa4.91□□□□□ -1.62
SKP1-202ENST00000353411 FBXO5Q9UKT4 447 aa4.91□□□□□ -1.62
SKP1-202ENST00000353411 SCO2O43819 266 aa4.91□□□□□ -1.62
SKP1-202ENST00000353411 FARS2O95363 451 aaKnown RBP4.91□□□□□ -1.62
SKP1-202ENST00000353411 SMIM6P0DI80 62 aa4.91□□□□□ -1.62
SKP1-202ENST00000353411 ETV4P43268 484 aa4.91□□□□□ -1.62
SKP1-202ENST00000353411 HOXA1P49639 335 aaPredicted RBP4.91□□□□□ -1.62
SKP1-202ENST00000353411 MS4A2Q01362 244 aa4.91□□□□□ -1.62
SKP1-202ENST00000353411 GRIK2Q13002 908 aa4.91□□□□□ -1.62
SKP1-202ENST00000353411 CDK5R2Q13319 367 aa4.91□□□□□ -1.62
SKP1-202ENST00000353411 PON3Q15166 354 aa4.91□□□□□ -1.62
SKP1-202ENST00000353411 DCST1Q5T197 706 aa4.91□□□□□ -1.62
SKP1-202ENST00000353411 MSANTD2Q6P1R3 559 aa4.91□□□□□ -1.62
SKP1-202ENST00000353411 GADL1Q6ZQY3 521 aa4.91□□□□□ -1.62
SKP1-202ENST00000353411 KIAA1958Q8N8K9 716 aa4.91□□□□□ -1.62
SKP1-202ENST00000353411 SGCDQ92629 289 aa4.91□□□□□ -1.62
SKP1-202ENST00000353411 CRB3Q9BUF7 120 aa4.91□□□□□ -1.62
SKP1-202ENST00000353411 FNDC11Q9BVV2 318 aa4.91□□□□□ -1.62
SKP1-202ENST00000353411 OR51E2Q9H255 320 aa4.91□□□□□ -1.62
SKP1-202ENST00000353411 SPNS1Q9H2V7 528 aa4.91□□□□□ -1.62
SKP1-202ENST00000353411 ZNF395Q9H8N7 513 aaPredicted RBP4.91□□□□□ -1.62
SKP1-202ENST00000353411 HACL1Q9UJ83 578 aa4.91□□□□□ -1.62
SKP1-202ENST00000353411 SLC25A13Q9UJS0 675 aa4.91□□□□□ -1.62
SKP1-202ENST00000353411 GNG8Q9UK08 70 aa4.91□□□□□ -1.62
SKP1-202ENST00000353411 ZFC3H1O60293 1989 aaKnown RBP4.91□□□□□ -1.62
SKP1-202ENST00000353411 MED1Q15648 1581 aaPredicted RBP4.91□□□□□ -1.62
SKP1-202ENST00000353411 NUP205Q92621 2012 aa4.91□□□□□ -1.62
SKP1-202ENST00000353411 A0A1W2PQ09 198 aa4.91□□□□□ -1.62
SKP1-202ENST00000353411 A0A1W2PQL4 384 aaPredicted RBP4.91□□□□□ -1.62
SKP1-202ENST00000353411 GRK5P34947 590 aa4.91□□□□□ -1.62
SKP1-202ENST00000353411 EMX1Q04741 257 aaPredicted RBP4.91□□□□□ -1.62
SKP1-202ENST00000353411 RNASE12Q5GAN4 147 aaKnown RBP4.91□□□□□ -1.62
SKP1-202ENST00000353411 MAP4K3Q8IVH8 894 aa4.91□□□□□ -1.62
SKP1-202ENST00000353411 DCUN1D3Q8IWE4 304 aa4.91□□□□□ -1.62
SKP1-202ENST00000353411 LNX2Q8N448 690 aa4.91□□□□□ -1.62
SKP1-202ENST00000353411 ZNF454Q8N9F8 522 aa4.91□□□□□ -1.62
SKP1-202ENST00000353411 FAM46DQ8NEK8 389 aa4.91□□□□□ -1.62
SKP1-202ENST00000353411 LHX5Q9H2C1 402 aa4.91□□□□□ -1.62
SKP1-202ENST00000353411 SIX2Q9NPC8 291 aa4.91□□□□□ -1.62
SKP1-202ENST00000353411 DDX4Q9NQI0 724 aaKnown RBP4.91□□□□□ -1.62
SKP1-202ENST00000353411 PCDHGB1Q9Y5G3 927 aa4.91□□□□□ -1.62
SKP1-202ENST00000353411 TNS2Q63HR2 1409 aa4.91□□□□□ -1.62
SKP1-202ENST00000353411 TMEM131LA2VDJ0 1609 aa4.91□□□□□ -1.62
SKP1-202ENST00000353411 NARSO43776 548 aaKnown RBP4.91□□□□□ -1.62
SKP1-202ENST00000353411 IFNW1P05000 195 aa4.91□□□□□ -1.62
SKP1-202ENST00000353411 PPP4CP60510 307 aa4.91□□□□□ -1.62
SKP1-202ENST00000353411 ORC1Q13415 861 aa4.91□□□□□ -1.62
SKP1-202ENST00000353411 LRRC26Q2I0M4 334 aa4.91□□□□□ -1.62
SKP1-202ENST00000353411 AP5B1Q2VPB7 878 aa4.91□□□□□ -1.62
SKP1-202ENST00000353411 CYS1Q717R9 158 aa4.91□□□□□ -1.62
SKP1-202ENST00000353411 SLC38A6Q8IZM9 456 aa4.91□□□□□ -1.62
SKP1-202ENST00000353411 OR1J4Q8NGS1 313 aa4.91□□□□□ -1.62
SKP1-202ENST00000353411 RANBP9Q96S59 729 aa4.91□□□□□ -1.62
SKP1-202ENST00000353411 PBDC1Q9BVG4 233 aa4.91□□□□□ -1.62
SKP1-202ENST00000353411 TMEM106CQ9BVX2 250 aa4.91□□□□□ -1.62
SKP1-202ENST00000353411 B3GNT5Q9BYG0 378 aa4.91□□□□□ -1.62
SKP1-202ENST00000353411 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.91□□□□□ -1.62
SKP1-202ENST00000353411 TMEM185BQ9H7F4 350 aa4.91□□□□□ -1.62
SKP1-202ENST00000353411 SPHK1Q9NYA1 384 aa4.91□□□□□ -1.62
SKP1-202ENST00000353411 GMPR2Q9P2T1 348 aaKnown RBP4.91□□□□□ -1.62
SKP1-202ENST00000353411 EXTL2Q9UBQ6 330 aa4.91□□□□□ -1.62
SKP1-202ENST00000353411 PGAP2Q9UHJ9 254 aa4.91□□□□□ -1.62
SKP1-202ENST00000353411 COPS3Q9UNS2 423 aa4.91□□□□□ -1.62
SKP1-202ENST00000353411 DYRK1BQ9Y463 629 aa4.91□□□□□ -1.62
SKP1-202ENST00000353411 AHDC1Q5TGY3 1603 aaPredicted RBP4.91□□□□□ -1.62
SKP1-202ENST00000353411 CACNA1EQ15878 2313 aa4.91□□□□□ -1.62
SKP1-202ENST00000353411 PPLO60437 1756 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms