RNA–Protein interactions for RNA: ENST00000347613.8

CLCN3-201, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLCN3, Length 3,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-201ENST00000347613 DEFB115Q30KQ5 88 aa5.84□□□□□ -1.47
CLCN3-201ENST00000347613 ARSIQ5FYB1 569 aa5.84□□□□□ -1.47
CLCN3-201ENST00000347613 ACBD5Q5T8D3 534 aaPredicted RBP5.84□□□□□ -1.47
CLCN3-201ENST00000347613 LILRA6Q6PI73 481 aa5.84□□□□□ -1.47
CLCN3-201ENST00000347613 ZDHHC21Q8IVQ6 265 aa5.84□□□□□ -1.47
CLCN3-201ENST00000347613 SHISA5Q8N114 240 aa5.84□□□□□ -1.47
CLCN3-201ENST00000347613 NAGSQ8N159 534 aa5.84□□□□□ -1.47
CLCN3-201ENST00000347613 L3MBTL4Q8NA19 623 aa5.84□□□□□ -1.47
CLCN3-201ENST00000347613 GPR156Q8NFN8 814 aa5.84□□□□□ -1.47
CLCN3-201ENST00000347613 VN1R2Q8NFZ6 395 aa5.84□□□□□ -1.47
CLCN3-201ENST00000347613 OR4K1Q8NGD4 311 aa5.84□□□□□ -1.47
CLCN3-201ENST00000347613 C7orf34Q96L11 122 aa5.84□□□□□ -1.47
CLCN3-201ENST00000347613 COPS8Q99627 209 aa5.84□□□□□ -1.47
CLCN3-201ENST00000347613 C2orf49Q9BVC5 232 aaPredicted RBP5.84□□□□□ -1.47
CLCN3-201ENST00000347613 RIOK2Q9BVS4 552 aaKnown RBP5.84□□□□□ -1.47
CLCN3-201ENST00000347613 MRPL9Q9BYD2 267 aaKnown RBP5.84□□□□□ -1.47
CLCN3-201ENST00000347613 ATP13A3Q9H7F0 1226 aa5.84□□□□□ -1.47
CLCN3-201ENST00000347613 PARVBQ9HBI1 364 aa5.84□□□□□ -1.47
CLCN3-201ENST00000347613 VPS9D1Q9Y2B5 631 aa5.84□□□□□ -1.47
CLCN3-201ENST00000347613 PRKAB1Q9Y478 270 aa5.84□□□□□ -1.47
CLCN3-201ENST00000347613 CKAP5Q14008 2032 aa5.84□□□□□ -1.47
CLCN3-201ENST00000347613 COL6A3P12111 3177 aa5.84□□□□□ -1.47
CLCN3-201ENST00000347613 SNRNP200O75643 2136 aaKnown RBP5.84□□□□□ -1.47
CLCN3-201ENST00000347613 COL4A3Q01955 1670 aa5.84□□□□□ -1.47
CLCN3-201ENST00000347613 C1orf226A1L170 272 aa5.84□□□□□ -1.47
CLCN3-201ENST00000347613 SH3PXD2BA1X283 911 aa5.84□□□□□ -1.47
CLCN3-201ENST00000347613 TRIM43BA6NCK2 446 aa5.84□□□□□ -1.47
CLCN3-201ENST00000347613 WASH3PC4AMC7 463 aa5.84□□□□□ -1.47
CLCN3-201ENST00000347613 E9PQ18 207 aa5.84□□□□□ -1.47
CLCN3-201ENST00000347613 FAM227AF5H4B4 570 aa5.84□□□□□ -1.47
CLCN3-201ENST00000347613 CLIC1O00299 241 aa5.84□□□□□ -1.47
CLCN3-201ENST00000347613 SLC28A1O00337 649 aa5.84□□□□□ -1.47
CLCN3-201ENST00000347613 SEMA7AO75326 666 aa5.84□□□□□ -1.47
CLCN3-201ENST00000347613 TULP3O75386 442 aa5.84□□□□□ -1.47
CLCN3-201ENST00000347613 DEAF1O75398 565 aaPredicted RBP5.84□□□□□ -1.47
CLCN3-201ENST00000347613 NTRK1P04629 796 aa5.84□□□□□ -1.47
CLCN3-201ENST00000347613 ANXA5P08758 320 aa5.84□□□□□ -1.47
CLCN3-201ENST00000347613 FCGR1AP12314 374 aa5.84□□□□□ -1.47
CLCN3-201ENST00000347613 TIMP2P16035 220 aa5.84□□□□□ -1.47
CLCN3-201ENST00000347613 KCNJ10P78508 379 aa5.84□□□□□ -1.47
CLCN3-201ENST00000347613 CREMQ03060 361 aa5.84□□□□□ -1.47
CLCN3-201ENST00000347613 UAP1L1Q3KQV9 507 aa5.84□□□□□ -1.47
CLCN3-201ENST00000347613 AASDHQ4L235 1098 aaPredicted RBP5.84□□□□□ -1.47
CLCN3-201ENST00000347613 ZNF658BQ4V348 819 aaPredicted RBP5.84□□□□□ -1.47
CLCN3-201ENST00000347613 DDX59Q5T1V6 619 aaKnown RBP eCLIP5.84□□□□□ -1.47
CLCN3-201ENST00000347613 ZNF697Q5TEC3 545 aa5.84□□□□□ -1.47
CLCN3-201ENST00000347613 OLIG3Q7RTU3 272 aa5.84□□□□□ -1.47
CLCN3-201ENST00000347613 CBARPQ8N350 705 aaPredicted RBP5.84□□□□□ -1.47
CLCN3-201ENST00000347613 TNIP2Q8NFZ5 429 aa5.84□□□□□ -1.47
CLCN3-201ENST00000347613 ZFP90Q8TF47 636 aa5.84□□□□□ -1.47
CLCN3-201ENST00000347613 MUL1Q969V5 352 aa5.84□□□□□ -1.47
CLCN3-201ENST00000347613 TRIM43Q96BQ3 446 aaPredicted RBP5.84□□□□□ -1.47
CLCN3-201ENST00000347613 ULK4Q96C45 1275 aa5.84□□□□□ -1.47
CLCN3-201ENST00000347613 RSPRY1Q96DX4 576 aa5.84□□□□□ -1.47
CLCN3-201ENST00000347613 PLEKHA8Q96JA3 519 aa5.84□□□□□ -1.47
CLCN3-201ENST00000347613 MUC13Q9H3R2 512 aa5.84□□□□□ -1.47
CLCN3-201ENST00000347613 AASDHPPTQ9NRN7 309 aa5.84□□□□□ -1.47
CLCN3-201ENST00000347613 ASIC5Q9NY37 505 aa5.84□□□□□ -1.47
CLCN3-201ENST00000347613 HS3ST2Q9Y278 367 aa5.84□□□□□ -1.47
CLCN3-201ENST00000347613 KIF26AQ9ULI4 1882 aaPredicted RBP5.84□□□□□ -1.47
CLCN3-201ENST00000347613 KIAA0100Q14667 2235 aaKnown RBP5.84□□□□□ -1.48
CLCN3-201ENST00000347613 A0A096LPI6 279 aa5.84□□□□□ -1.48
CLCN3-201ENST00000347613 TYW5A2RUC4 315 aaKnown RBP5.84□□□□□ -1.48
CLCN3-201ENST00000347613 FAM220BPB1ANY3 271 aa5.84□□□□□ -1.48
CLCN3-201ENST00000347613 FPGTO14772 594 aa5.84□□□□□ -1.48
CLCN3-201ENST00000347613 LCKP06239 509 aa5.84□□□□□ -1.48
CLCN3-201ENST00000347613 MSH3P20585 1137 aa5.84□□□□□ -1.48
CLCN3-201ENST00000347613 GSTM2P28161 218 aa5.84□□□□□ -1.48
CLCN3-201ENST00000347613 IMPA1P29218 277 aa5.84□□□□□ -1.48
CLCN3-201ENST00000347613 PBLDP30039 288 aaPredicted RBP5.84□□□□□ -1.48
CLCN3-201ENST00000347613 C21orf33P30042 268 aaPredicted RBP5.84□□□□□ -1.48
CLCN3-201ENST00000347613 AKT1P31749 480 aa5.84□□□□□ -1.48
CLCN3-201ENST00000347613 S100A3P33764 101 aa5.84□□□□□ -1.48
CLCN3-201ENST00000347613 PTGER1P34995 402 aa5.84□□□□□ -1.48
CLCN3-201ENST00000347613 HALP42357 657 aa5.84□□□□□ -1.48
CLCN3-201ENST00000347613 VEGFBP49765 207 aa5.84□□□□□ -1.48
CLCN3-201ENST00000347613 NCS1P62166 190 aa5.84□□□□□ -1.48
CLCN3-201ENST00000347613 MTAPQ13126 283 aa5.84□□□□□ -1.48
CLCN3-201ENST00000347613 GTF2H3Q13889 308 aa5.84□□□□□ -1.48
CLCN3-201ENST00000347613 TEAD2Q15562 447 aa5.84□□□□□ -1.48
CLCN3-201ENST00000347613 CYP2A13Q16696 494 aa5.84□□□□□ -1.48
CLCN3-201ENST00000347613 SPATS1Q496A3 300 aa5.84□□□□□ -1.48
CLCN3-201ENST00000347613 TPGS2Q68CL5 300 aa5.84□□□□□ -1.48
CLCN3-201ENST00000347613 KDM4DQ6B0I6 523 aa5.84□□□□□ -1.48
CLCN3-201ENST00000347613 GRAMD4Q6IC98 578 aa5.84□□□□□ -1.48
CLCN3-201ENST00000347613 RETSATQ6NUM9 610 aa5.84□□□□□ -1.48
CLCN3-201ENST00000347613 ZNF621Q6ZSS3 439 aa5.84□□□□□ -1.48
CLCN3-201ENST00000347613 IGFN1Q86VF2 1251 aa5.84□□□□□ -1.48
CLCN3-201ENST00000347613 CCDC103Q8IW40 242 aa5.84□□□□□ -1.48
CLCN3-201ENST00000347613 PAF1Q8N7H5 531 aa5.84□□□□□ -1.48
CLCN3-201ENST00000347613 ABHD11Q8NFV4 315 aa5.84□□□□□ -1.48
CLCN3-201ENST00000347613 GIPC3Q8TF64 312 aa5.84□□□□□ -1.48
CLCN3-201ENST00000347613 NEIL2Q969S2 332 aa5.84□□□□□ -1.48
CLCN3-201ENST00000347613 FAM120BQ96EK7 910 aaKnown RBP5.84□□□□□ -1.48
CLCN3-201ENST00000347613 ASIC4Q96FT7 647 aa5.84□□□□□ -1.48
CLCN3-201ENST00000347613 PKP4Q99569 1192 aa5.84□□□□□ -1.48
CLCN3-201ENST00000347613 RIBC2Q9H4K1 309 aa5.84□□□□□ -1.48
CLCN3-201ENST00000347613 TRIM39Q9HCM9 518 aa5.84□□□□□ -1.48
CLCN3-201ENST00000347613 PAK6Q9NQU5 681 aaPredicted RBP5.84□□□□□ -1.48
CLCN3-201ENST00000347613 IRAK4Q9NWZ3 460 aa5.84□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms