RNA–Protein interactions for RNA: ENST00000343550.9

USF2-202, Transcript of upstream transcription factor 2, c-fos interacting, humanhuman

TSL 1 (best) BASIC

Gene USF2, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF2-202ENST00000343550 PPP1R3AQ16821 1122 aa17.25■□□□□ 0.35
USF2-202ENST00000343550 FAM153CQ494X1 144 aa17.25■□□□□ 0.35
USF2-202ENST00000343550 SPATA6LQ8N4H0 392 aa17.25■□□□□ 0.35
USF2-202ENST00000343550 MIB2Q96AX9 1013 aa17.25■□□□□ 0.35
USF2-202ENST00000343550 CHST8Q9H2A9 424 aa17.25■□□□□ 0.35
USF2-202ENST00000343550 ACTR5Q9H9F9 607 aaPredicted RBP17.25■□□□□ 0.35
USF2-202ENST00000343550 ANKMY1Q9P2S6 941 aa17.25■□□□□ 0.35
USF2-202ENST00000343550 NBASA2RRP1 2371 aa17.24■□□□□ 0.35
USF2-202ENST00000343550 MEN1O00255 615 aa17.24■□□□□ 0.35
USF2-202ENST00000343550 NRP2O60462 931 aa17.24■□□□□ 0.35
USF2-202ENST00000343550 GUCA1CO95843 209 aa17.24■□□□□ 0.35
USF2-202ENST00000343550 MLLT10P55197 1068 aa17.24■□□□□ 0.35
USF2-202ENST00000343550 ABATP80404 500 aa17.24■□□□□ 0.35
USF2-202ENST00000343550 IL10RAQ13651 578 aa17.24■□□□□ 0.35
USF2-202ENST00000343550 NAA25Q14CX7 972 aa17.24■□□□□ 0.35
USF2-202ENST00000343550 TEX35Q5T0J7 233 aa17.24■□□□□ 0.35
USF2-202ENST00000343550 THEMIS2Q5TEJ8 643 aa17.24■□□□□ 0.35
USF2-202ENST00000343550 EIF1ADQ8N9N8 165 aaKnown RBP17.24■□□□□ 0.35
USF2-202ENST00000343550 FBXL8Q96CD0 374 aa17.24■□□□□ 0.35
USF2-202ENST00000343550 CLIP3Q96DZ5 547 aa17.24■□□□□ 0.35
USF2-202ENST00000343550 PLCD4Q9BRC7 762 aa17.24■□□□□ 0.35
USF2-202ENST00000343550 SGPP1Q9BX95 441 aa17.24■□□□□ 0.35
USF2-202ENST00000343550 CCDC177Q9NQR7 707 aaPredicted RBP17.24■□□□□ 0.35
USF2-202ENST00000343550 UTP6Q9NYH9 597 aaKnown RBP17.24■□□□□ 0.35
USF2-202ENST00000343550 CTNNAL1Q9UBT7 734 aa17.24■□□□□ 0.35
USF2-202ENST00000343550 AP1M2Q9Y6Q5 423 aa17.24■□□□□ 0.35
USF2-202ENST00000343550 FLNCQ14315 2725 aa17.24■□□□□ 0.35
USF2-202ENST00000343550 CLEC18AA5D8T8 446 aa17.23■□□□□ 0.35
USF2-202ENST00000343550 NPEPPSL1A6NEC2 478 aa17.23■□□□□ 0.35
USF2-202ENST00000343550 SRPX2O60687 465 aaPredicted RBP17.23■□□□□ 0.35
USF2-202ENST00000343550 CCNDBP1O95273 360 aa17.23■□□□□ 0.35
USF2-202ENST00000343550 NPPBP16860 134 aa17.23■□□□□ 0.35
USF2-202ENST00000343550 CRABP2P29373 138 aa17.23■□□□□ 0.35
USF2-202ENST00000343550 RORAP35398 523 aa17.23■□□□□ 0.35
USF2-202ENST00000343550 TBPL1P62380 186 aa17.23■□□□□ 0.35
USF2-202ENST00000343550 TSNQ15631 228 aaKnown RBP17.23■□□□□ 0.35
USF2-202ENST00000343550 MROH9Q5TGP6 573 aa17.23■□□□□ 0.35
USF2-202ENST00000343550 CPZQ66K79 652 aa17.23■□□□□ 0.35
USF2-202ENST00000343550 ZNF425Q6IV72 752 aa17.23■□□□□ 0.35
USF2-202ENST00000343550 LCN10Q6JVE6 187 aa17.23■□□□□ 0.35
USF2-202ENST00000343550 TLDC1Q6P9B6 456 aa17.23■□□□□ 0.35
USF2-202ENST00000343550 CLEC18BQ6UXF7 455 aa17.23■□□□□ 0.35
USF2-202ENST00000343550 TRMT10CQ7L0Y3 403 aaKnown RBP17.23■□□□□ 0.35
USF2-202ENST00000343550 CMC1Q7Z7K0 106 aa17.23■□□□□ 0.35
USF2-202ENST00000343550 DSELQ8IZU8 1212 aa17.23■□□□□ 0.35
USF2-202ENST00000343550 CLEC18CQ8NCF0 446 aa17.23■□□□□ 0.35
USF2-202ENST00000343550 OR56A3Q8NH54 315 aa17.23■□□□□ 0.35
USF2-202ENST00000343550 SLC44A1Q8WWI5 657 aa17.23■□□□□ 0.35
USF2-202ENST00000343550 ATL1Q8WXF7 558 aa17.23■□□□□ 0.35
USF2-202ENST00000343550 ZNF285Q96NJ3 590 aa17.23■□□□□ 0.35
USF2-202ENST00000343550 TXLNGYQ9BZA5 131 aa17.23■□□□□ 0.35
USF2-202ENST00000343550 UNKQ9C0B0 810 aaKnown RBP17.23■□□□□ 0.35
USF2-202ENST00000343550 PCBD2Q9H0N5 130 aa17.23■□□□□ 0.35
USF2-202ENST00000343550 ING2Q9H160 280 aa17.23■□□□□ 0.35
USF2-202ENST00000343550 ENAMQ9NRM1 1142 aa17.23■□□□□ 0.35
USF2-202ENST00000343550 PCMTD2Q9NV79 361 aa17.23■□□□□ 0.35
USF2-202ENST00000343550 SNX7Q9UNH6 387 aa17.23■□□□□ 0.35
USF2-202ENST00000343550 OARD1Q9Y530 152 aa17.23■□□□□ 0.35
USF2-202ENST00000343550 SPENQ96T58 3664 aaKnown RBP17.23■□□□□ 0.35
USF2-202ENST00000343550 PTPN13Q12923 2485 aa17.23■□□□□ 0.35
USF2-202ENST00000343550 MAST4O15021 2626 aa17.23■□□□□ 0.35
USF2-202ENST00000343550 LOC105369274A0A096LPK9 316 aa17.22■□□□□ 0.35
USF2-202ENST00000343550 LOC102723532A0A0G2JNH3 316 aa17.22■□□□□ 0.35
USF2-202ENST00000343550 A0A0J9YVX5 310 aa17.22■□□□□ 0.35
USF2-202ENST00000343550 PABPN1LA6NDY0 278 aaKnown RBP17.22■□□□□ 0.35
USF2-202ENST00000343550 ARGFXA6NJG6 315 aa17.22■□□□□ 0.35
USF2-202ENST00000343550 HBQ1P09105 142 aa17.22■□□□□ 0.35
USF2-202ENST00000343550 RAB40ALP0C0E4 278 aa17.22■□□□□ 0.35
USF2-202ENST00000343550 SLC35E2BP0CK96 405 aa17.22■□□□□ 0.35
USF2-202ENST00000343550 CD1DP15813 335 aa17.22■□□□□ 0.35
USF2-202ENST00000343550 CCND1P24385 295 aa17.22■□□□□ 0.35
USF2-202ENST00000343550 GMPRP36959 345 aa17.22■□□□□ 0.35
USF2-202ENST00000343550 CD97P48960 835 aa17.22■□□□□ 0.35
USF2-202ENST00000343550 CCL11P51671 97 aa17.22■□□□□ 0.35
USF2-202ENST00000343550 CDKL1Q00532 357 aa17.22■□□□□ 0.35
USF2-202ENST00000343550 RELAQ04206 551 aa17.22■□□□□ 0.35
USF2-202ENST00000343550 CHAF1BQ13112 559 aa17.22■□□□□ 0.35
USF2-202ENST00000343550 UAP1Q16222 522 aaPredicted RBP17.22■□□□□ 0.35
USF2-202ENST00000343550 PRAMEF13Q5VWM6 474 aa17.22■□□□□ 0.35
USF2-202ENST00000343550 FRMPD2BQ6IN97 320 aa17.22■□□□□ 0.35
USF2-202ENST00000343550 RAPH1Q70E73 1250 aa17.22■□□□□ 0.35
USF2-202ENST00000343550 RNF44Q7L0R7 432 aa17.22■□□□□ 0.35
USF2-202ENST00000343550 ADAMTSL2Q86TH1 951 aa17.22■□□□□ 0.35
USF2-202ENST00000343550 ATCAYQ86WG3 371 aa17.22■□□□□ 0.35
USF2-202ENST00000343550 PAQR7Q86WK9 346 aa17.22■□□□□ 0.35
USF2-202ENST00000343550 OR4N4Q8N0Y3 316 aa17.22■□□□□ 0.35
USF2-202ENST00000343550 ZNF655Q8N720 491 aaPredicted RBP17.22■□□□□ 0.35
USF2-202ENST00000343550 UHMK1Q8TAS1 419 aaKnown RBP17.22■□□□□ 0.35
USF2-202ENST00000343550 PYCR2Q96C36 320 aa17.22■□□□□ 0.35
USF2-202ENST00000343550 SLC25A23Q9BV35 468 aa17.22■□□□□ 0.35
USF2-202ENST00000343550 NLNQ9BYT8 704 aa17.22■□□□□ 0.35
USF2-202ENST00000343550 SLC7A5P2Q9GIP4 190 aa17.22■□□□□ 0.35
USF2-202ENST00000343550 ACSS2Q9NR19 701 aa17.22■□□□□ 0.35
USF2-202ENST00000343550 A0A087WUV0 522 aaPredicted RBP17.21■□□□□ 0.35
USF2-202ENST00000343550 H7BY64 318 aa17.21■□□□□ 0.35
USF2-202ENST00000343550 ZSCAN9O15535 394 aaPredicted RBP17.21■□□□□ 0.35
USF2-202ENST00000343550 MYBL2P10244 700 aa17.21■□□□□ 0.35
USF2-202ENST00000343550 GCGRP47871 477 aa17.21■□□□□ 0.35
USF2-202ENST00000343550 PGDP52209 483 aa17.21■□□□□ 0.35
USF2-202ENST00000343550 ATP6V0D1P61421 351 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms