RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 Q6ZSR9 355 aa17.99■□□□□ 0.47
SMPD1-201ENST00000342245 PIM3Q86V86 326 aa17.99■□□□□ 0.47
SMPD1-201ENST00000342245 RASGRP3Q8IV61 690 aa17.99■□□□□ 0.47
SMPD1-201ENST00000342245 PHC2Q8IXK0 858 aa17.99■□□□□ 0.47
SMPD1-201ENST00000342245 RBPMSQ93062 196 aaKnown RBP17.99■□□□□ 0.47
SMPD1-201ENST00000342245 MSLNLQ96KJ4 702 aa17.99■□□□□ 0.47
SMPD1-201ENST00000342245 CAMKK2Q96RR4 588 aa17.99■□□□□ 0.47
SMPD1-201ENST00000342245 TTPALQ9BTX7 342 aa17.99■□□□□ 0.47
SMPD1-201ENST00000342245 CNPPD1Q9BV87 410 aa17.99■□□□□ 0.47
SMPD1-201ENST00000342245 MCOLN1Q9GZU1 580 aa17.99■□□□□ 0.47
SMPD1-201ENST00000342245 CLEC4MQ9H2X3 399 aaPredicted RBP17.99■□□□□ 0.47
SMPD1-201ENST00000342245 IFT46Q9NQC8 304 aa17.99■□□□□ 0.47
SMPD1-201ENST00000342245 PRMT7Q9NVM4 692 aaPredicted RBP17.99■□□□□ 0.47
SMPD1-201ENST00000342245 CUEDC1Q9NWM3 386 aaPredicted RBP17.99■□□□□ 0.47
SMPD1-201ENST00000342245 UBQLN2Q9UHD9 624 aa17.99■□□□□ 0.47
SMPD1-201ENST00000342245 ABCG2Q9UNQ0 655 aa17.99■□□□□ 0.47
SMPD1-201ENST00000342245 MAN2B2Q9Y2E5 1009 aa17.99■□□□□ 0.47
SMPD1-201ENST00000342245 SHROOM3Q8TF72 1996 aa17.99■□□□□ 0.47
SMPD1-201ENST00000342245 A0A1B0GTL3 188 aa17.98■□□□□ 0.47
SMPD1-201ENST00000342245 ZNF670-ZNF695F2Z2N8 137 aa17.98■□□□□ 0.47
SMPD1-201ENST00000342245 PER2O15055 1255 aa17.98■□□□□ 0.47
SMPD1-201ENST00000342245 B4GALT5O43286 388 aa17.98■□□□□ 0.47
SMPD1-201ENST00000342245 KELP23276 732 aa17.98■□□□□ 0.47
SMPD1-201ENST00000342245 ADORA2BP29275 332 aa17.98■□□□□ 0.47
SMPD1-201ENST00000342245 MAD2L1Q13257 205 aaPredicted RBP17.98■□□□□ 0.47
SMPD1-201ENST00000342245 WSCD2Q2TBF2 565 aa17.98■□□□□ 0.47
SMPD1-201ENST00000342245 PYDC2Q56P42 97 aa17.98■□□□□ 0.47
SMPD1-201ENST00000342245 CELF3Q5SZQ8 465 aaKnown RBP17.98■□□□□ 0.47
SMPD1-201ENST00000342245 KLHL17Q6TDP4 642 aa17.98■□□□□ 0.47
SMPD1-201ENST00000342245 C3orf58Q8NDZ4 430 aa17.98■□□□□ 0.47
SMPD1-201ENST00000342245 PTP4A1Q93096 173 aa17.98■□□□□ 0.47
SMPD1-201ENST00000342245 SAMD11Q96NU1 681 aa17.98■□□□□ 0.47
SMPD1-201ENST00000342245 EPYCQ99645 322 aa17.98■□□□□ 0.47
SMPD1-201ENST00000342245 USB1Q9BQ65 265 aaKnown RBP17.98■□□□□ 0.47
SMPD1-201ENST00000342245 DERL2Q9GZP9 239 aa17.98■□□□□ 0.47
SMPD1-201ENST00000342245 OR51B5Q9H339 312 aa17.98■□□□□ 0.47
SMPD1-201ENST00000342245 FBXW11Q9UKB1 542 aa17.98■□□□□ 0.47
SMPD1-201ENST00000342245 PCDHGB7Q9Y5F8 929 aa17.98■□□□□ 0.47
SMPD1-201ENST00000342245 RPS10-NUDT3A0A1W2PQS6 291 aa17.98■□□□□ 0.47
SMPD1-201ENST00000342245 FAM170BA6NMN3 283 aa17.98■□□□□ 0.47
SMPD1-201ENST00000342245 WNT9AO14904 365 aa17.98■□□□□ 0.47
SMPD1-201ENST00000342245 ARSBP15848 533 aa17.98■□□□□ 0.47
SMPD1-201ENST00000342245 HLA-FP30511 346 aa17.98■□□□□ 0.47
SMPD1-201ENST00000342245 GPC1P35052 558 aa17.98■□□□□ 0.47
SMPD1-201ENST00000342245 CCT3P49368 545 aaKnown RBP17.98■□□□□ 0.47
SMPD1-201ENST00000342245 HOXC5Q00444 222 aa17.98■□□□□ 0.47
SMPD1-201ENST00000342245 ABHD18Q0P651 414 aa17.98■□□□□ 0.47
SMPD1-201ENST00000342245 SCRN3Q0VDG4 424 aa17.98■□□□□ 0.47
SMPD1-201ENST00000342245 GRIK4Q16099 956 aa17.98■□□□□ 0.47
SMPD1-201ENST00000342245 SLC10A6Q3KNW5 377 aa17.98■□□□□ 0.47
SMPD1-201ENST00000342245 OR52H1Q8NGJ2 320 aa17.98■□□□□ 0.47
SMPD1-201ENST00000342245 OR6B3Q8NGW1 331 aa17.98■□□□□ 0.47
SMPD1-201ENST00000342245 ST8SIA4Q92187 359 aa17.98■□□□□ 0.47
SMPD1-201ENST00000342245 ZNF382Q96SR6 550 aa17.98■□□□□ 0.47
SMPD1-201ENST00000342245 IKZF5Q9H5V7 419 aa17.98■□□□□ 0.47
SMPD1-201ENST00000342245 GPR83Q9NYM4 423 aa17.98■□□□□ 0.47
SMPD1-201ENST00000342245 PCTPQ9UKL6 214 aa17.98■□□□□ 0.47
SMPD1-201ENST00000342245 ACSL5Q9ULC5 683 aa17.98■□□□□ 0.47
SMPD1-201ENST00000342245 FAM240BA0A1B0GVZ2 78 aa17.97■□□□□ 0.47
SMPD1-201ENST00000342245 SGTAO43765 313 aa17.97■□□□□ 0.47
SMPD1-201ENST00000342245 KLK8O60259 260 aa17.97■□□□□ 0.47
SMPD1-201ENST00000342245 HMGB2P26583 209 aaKnown RBP17.97■□□□□ 0.47
SMPD1-201ENST00000342245 GZMMP51124 257 aa17.97■□□□□ 0.47
SMPD1-201ENST00000342245 ZNF273Q14593 569 aa17.97■□□□□ 0.47
SMPD1-201ENST00000342245 LAPTM4AQ15012 233 aa17.97■□□□□ 0.47
SMPD1-201ENST00000342245 MED22Q15528 200 aa17.97■□□□□ 0.47
SMPD1-201ENST00000342245 STXBP2Q15833 593 aa17.97■□□□□ 0.47
SMPD1-201ENST00000342245 ZNF800Q2TB10 664 aaPredicted RBP eCLIP17.97■□□□□ 0.47
SMPD1-201ENST00000342245 TRIQKQ629K1 86 aa17.97■□□□□ 0.47
SMPD1-201ENST00000342245 KDELC1Q6UW63 502 aa17.97■□□□□ 0.47
SMPD1-201ENST00000342245 GALNT10Q86SR1 603 aa17.97■□□□□ 0.47
SMPD1-201ENST00000342245 CRYBG2Q8N1P7 616 aa17.97■□□□□ 0.47
SMPD1-201ENST00000342245 TMEM130Q8N3G9 435 aa17.97■□□□□ 0.47
SMPD1-201ENST00000342245 CLDN22Q8N7P3 220 aa17.97■□□□□ 0.47
SMPD1-201ENST00000342245 DIRAS2Q96HU8 199 aa17.97■□□□□ 0.47
SMPD1-201ENST00000342245 PPP3R2Q96LZ3 170 aa17.97■□□□□ 0.47
SMPD1-201ENST00000342245 SORCS2Q96PQ0 1159 aa17.97■□□□□ 0.47
SMPD1-201ENST00000342245 SLC25A37Q9NYZ2 338 aa17.97■□□□□ 0.47
SMPD1-201ENST00000342245 TSC2P49815 1807 aa17.97■□□□□ 0.47
SMPD1-201ENST00000342245 TRBV5-3A0A0A0MS03 114 aa17.97■□□□□ 0.47
SMPD1-201ENST00000342245 IGKV6-21A0A0C4DH24 114 aa17.97■□□□□ 0.47
SMPD1-201ENST00000342245 PITPNM1O00562 1244 aa17.97■□□□□ 0.47
SMPD1-201ENST00000342245 SCG5P05408 212 aa17.97■□□□□ 0.47
SMPD1-201ENST00000342245 COL6A1P12109 1028 aa17.97■□□□□ 0.47
SMPD1-201ENST00000342245 PSMA1P25786 263 aaKnown RBP17.97■□□□□ 0.47
SMPD1-201ENST00000342245 ITGB7P26010 798 aa17.97■□□□□ 0.47
SMPD1-201ENST00000342245 PTBP1P26599 531 aaKnown RBP eCLIP17.97■□□□□ 0.47
SMPD1-201ENST00000342245 ITGA1P56199 1179 aa17.97■□□□□ 0.47
SMPD1-201ENST00000342245 MBTD1Q05BQ5 628 aa17.97■□□□□ 0.47
SMPD1-201ENST00000342245 ALFQ53S48 1182 aa17.97■□□□□ 0.47
SMPD1-201ENST00000342245 DDI2Q5TDH0 399 aa17.97■□□□□ 0.47
SMPD1-201ENST00000342245 FAM171A1Q5VUB5 890 aa17.97■□□□□ 0.47
SMPD1-201ENST00000342245 ERICH5Q6P6B1 374 aa17.97■□□□□ 0.47
SMPD1-201ENST00000342245 SCIMPQ6UWF3 145 aa17.97■□□□□ 0.47
SMPD1-201ENST00000342245 FAM124AQ86V42 546 aa17.97■□□□□ 0.47
SMPD1-201ENST00000342245 MSRB3Q8IXL7 192 aa17.97■□□□□ 0.47
SMPD1-201ENST00000342245 SLC37A3Q8NCC5 494 aa17.97■□□□□ 0.47
SMPD1-201ENST00000342245 GMLQ99445 158 aa17.97■□□□□ 0.47
SMPD1-201ENST00000342245 SIK2Q9H0K1 926 aa17.97■□□□□ 0.47
SMPD1-201ENST00000342245 SLC6A17Q9H1V8 727 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms