RNA–Protein interactions for RNA: ENST00000334944.9

SF1-202, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-202ENST00000334944 OR2B6P58173 313 aa13.48□□□□□ -0.25
SF1-202ENST00000334944 BOP1Q14137 746 aaKnown RBP13.48□□□□□ -0.25
SF1-202ENST00000334944 CDK10Q15131 360 aa13.48□□□□□ -0.25
SF1-202ENST00000334944 ANKRD46Q86W74 232 aa13.48□□□□□ -0.25
SF1-202ENST00000334944 TMEM25Q86YD3 366 aa13.48□□□□□ -0.25
SF1-202ENST00000334944 ZNF366Q8N895 744 aa13.48□□□□□ -0.25
SF1-202ENST00000334944 CHST14Q8NCH0 376 aa13.48□□□□□ -0.25
SF1-202ENST00000334944 DYNC2LI1Q8TCX1 351 aa13.48□□□□□ -0.25
SF1-202ENST00000334944 BRINP2Q9C0B6 783 aa13.48□□□□□ -0.25
SF1-202ENST00000334944 AMBRA1Q9C0C7 1298 aa13.48□□□□□ -0.25
SF1-202ENST00000334944 PRM3Q9NNZ6 103 aa13.48□□□□□ -0.25
SF1-202ENST00000334944 FBXO8Q9NRD0 319 aa13.48□□□□□ -0.25
SF1-202ENST00000334944 TOR4AQ9NXH8 423 aa13.48□□□□□ -0.25
SF1-202ENST00000334944 VAPAQ9P0L0 249 aa13.48□□□□□ -0.25
SF1-202ENST00000334944 OPTCQ9UBM4 332 aa13.48□□□□□ -0.25
SF1-202ENST00000334944 LSM7Q9UK45 103 aaKnown RBP13.48□□□□□ -0.25
SF1-202ENST00000334944 EIF3LQ9Y262 564 aaKnown RBP13.48□□□□□ -0.25
SF1-202ENST00000334944 FAM234BA2RU67 622 aa13.48□□□□□ -0.25
SF1-202ENST00000334944 SEC22BO75396 215 aa13.48□□□□□ -0.25
SF1-202ENST00000334944 CDC20Q12834 499 aa13.48□□□□□ -0.25
SF1-202ENST00000334944 NPTX1Q15818 432 aa13.48□□□□□ -0.25
SF1-202ENST00000334944 SYT16Q17RD7 645 aa13.48□□□□□ -0.25
SF1-202ENST00000334944 ASTLQ6HA08 431 aaPredicted RBP13.48□□□□□ -0.25
SF1-202ENST00000334944 LCN8Q6JVE9 175 aa13.48□□□□□ -0.25
SF1-202ENST00000334944 PRMT9Q6P2P2 845 aa13.48□□□□□ -0.25
SF1-202ENST00000334944 SERPINA13PQ6UXR4 307 aa13.48□□□□□ -0.25
SF1-202ENST00000334944 Q6ZVU0 165 aa13.48□□□□□ -0.25
SF1-202ENST00000334944 GLRX5Q86SX6 157 aa13.48□□□□□ -0.25
SF1-202ENST00000334944 P2RY8Q86VZ1 359 aa13.48□□□□□ -0.25
SF1-202ENST00000334944 ZFAND4Q86XD8 727 aa13.48□□□□□ -0.25
SF1-202ENST00000334944 FAR1Q8WVX9 515 aa13.48□□□□□ -0.25
SF1-202ENST00000334944 FOXJ1Q92949 421 aa13.48□□□□□ -0.25
SF1-202ENST00000334944 TRIM54Q9BYV2 358 aa13.48□□□□□ -0.25
SF1-202ENST00000334944 TRIM15Q9C019 465 aa13.48□□□□□ -0.25
SF1-202ENST00000334944 SLIRPQ9GZT3 109 aaKnown RBP13.48□□□□□ -0.25
SF1-202ENST00000334944 SPG21Q9NZD8 308 aa13.48□□□□□ -0.25
SF1-202ENST00000334944 STOML2Q9UJZ1 356 aa13.48□□□□□ -0.25
SF1-202ENST00000334944 UTS2RQ9UKP6 389 aa13.48□□□□□ -0.25
SF1-202ENST00000334944 ZNF490Q9ULM2 529 aaPredicted RBP13.48□□□□□ -0.25
SF1-202ENST00000334944 A0A1W2PQ72 361 aa13.48□□□□□ -0.25
SF1-202ENST00000334944 GLULP15104 373 aa13.48□□□□□ -0.25
SF1-202ENST00000334944 PSMA3P25788 255 aa13.48□□□□□ -0.25
SF1-202ENST00000334944 CCR2P41597 374 aa13.48□□□□□ -0.25
SF1-202ENST00000334944 RGS4P49798 205 aa13.48□□□□□ -0.25
SF1-202ENST00000334944 CDKN3Q16667 212 aa13.48□□□□□ -0.25
SF1-202ENST00000334944 SPANXN4Q5MJ08 99 aa13.48□□□□□ -0.25
SF1-202ENST00000334944 DLEU7Q6UYE1 221 aa13.48□□□□□ -0.25
SF1-202ENST00000334944 DPY19L3Q6ZPD9 716 aa13.48□□□□□ -0.25
SF1-202ENST00000334944 VRK3Q8IV63 474 aa13.48□□□□□ -0.25
SF1-202ENST00000334944 TCEAL8Q8IYN2 117 aa13.48□□□□□ -0.25
SF1-202ENST00000334944 PHACTR4Q8IZ21 702 aa13.48□□□□□ -0.25
SF1-202ENST00000334944 DTWD1Q8N5C7 304 aa13.48□□□□□ -0.25
SF1-202ENST00000334944 ESX1Q8N693 406 aa13.48□□□□□ -0.25
SF1-202ENST00000334944 IL17RDQ8NFM7 739 aa13.48□□□□□ -0.25
SF1-202ENST00000334944 JPH3Q8WXH2 748 aaPredicted RBP13.48□□□□□ -0.25
SF1-202ENST00000334944 RORBQ92753 470 aa13.48□□□□□ -0.25
SF1-202ENST00000334944 SCAMP4Q969E2 229 aa13.48□□□□□ -0.25
SF1-202ENST00000334944 ULK4Q96C45 1275 aa13.48□□□□□ -0.25
SF1-202ENST00000334944 TCEAL4Q96EI5 215 aa13.48□□□□□ -0.25
SF1-202ENST00000334944 CCDC120Q96HB5 630 aa13.48□□□□□ -0.25
SF1-202ENST00000334944 THUMPD3Q9BV44 507 aaKnown RBP13.48□□□□□ -0.25
SF1-202ENST00000334944 SLC46A2Q9BY10 475 aa13.48□□□□□ -0.25
SF1-202ENST00000334944 YTHDF1Q9BYJ9 559 aaKnown RBP13.48□□□□□ -0.25
SF1-202ENST00000334944 ASPSCR1Q9BZE9 553 aa13.48□□□□□ -0.25
SF1-202ENST00000334944 SP140LQ9H930 580 aa13.48□□□□□ -0.25
SF1-202ENST00000334944 NTN4Q9HB63 628 aa13.48□□□□□ -0.25
SF1-202ENST00000334944 ZBTB20Q9HC78 741 aaPredicted RBP13.48□□□□□ -0.25
SF1-202ENST00000334944 PCDHB1Q9Y5F3 818 aa13.48□□□□□ -0.25
SF1-202ENST00000334944 SZT2Q5T011 3432 aa13.48□□□□□ -0.25
SF1-202ENST00000334944 GOLGA4Q13439 2230 aaKnown RBP13.47□□□□□ -0.25
SF1-202ENST00000334944 C16orf96A6NNT2 1141 aa13.47□□□□□ -0.25
SF1-202ENST00000334944 NEDD8-MDP1E9PL57 170 aa13.47□□□□□ -0.25
SF1-202ENST00000334944 LRATO95237 230 aa13.47□□□□□ -0.25
SF1-202ENST00000334944 OTCP00480 354 aa13.47□□□□□ -0.25
SF1-202ENST00000334944 C1QCP02747 245 aa13.47□□□□□ -0.25
SF1-202ENST00000334944 SRCP12931 536 aa13.47□□□□□ -0.25
SF1-202ENST00000334944 ZXDCQ2QGD7 858 aaPredicted RBP13.47□□□□□ -0.25
SF1-202ENST00000334944 SOWAHCQ53LP3 525 aaPredicted RBP13.47□□□□□ -0.25
SF1-202ENST00000334944 GPRC6AQ5T6X5 926 aa13.47□□□□□ -0.25
SF1-202ENST00000334944 AGAP6Q5VW22 663 aa13.47□□□□□ -0.25
SF1-202ENST00000334944 GLYATQ6IB77 296 aa13.47□□□□□ -0.25
SF1-202ENST00000334944 CERS6Q6ZMG9 384 aa13.47□□□□□ -0.25
SF1-202ENST00000334944 NXPE1Q8N323 547 aa13.47□□□□□ -0.25
SF1-202ENST00000334944 LIX1Q8N485 282 aa13.47□□□□□ -0.25
SF1-202ENST00000334944 LSMEM1Q8N8F7 131 aa13.47□□□□□ -0.25
SF1-202ENST00000334944 OR2AP1Q8NGE2 309 aa13.47□□□□□ -0.25
SF1-202ENST00000334944 AGAP4Q96P64 663 aa13.47□□□□□ -0.25
SF1-202ENST00000334944 NEDD4LQ96PU5 975 aa13.47□□□□□ -0.25
SF1-202ENST00000334944 NARFLQ9H6Q4 476 aa13.47□□□□□ -0.25
SF1-202ENST00000334944 SLC6A13Q9NSD5 602 aa13.47□□□□□ -0.25
SF1-202ENST00000334944 QPCTLQ9NXS2 382 aa13.47□□□□□ -0.25
SF1-202ENST00000334944 ARL15Q9NXU5 204 aa13.47□□□□□ -0.25
SF1-202ENST00000334944 U3KQV3 271 aa13.47□□□□□ -0.25
SF1-202ENST00000334944 CPNE3O75131 537 aaKnown RBP13.47□□□□□ -0.25
SF1-202ENST00000334944 GABARAPO95166 117 aa13.47□□□□□ -0.25
SF1-202ENST00000334944 IGSF6O95976 241 aa13.47□□□□□ -0.25
SF1-202ENST00000334944 CCL5P13501 91 aa13.47□□□□□ -0.25
SF1-202ENST00000334944 CYP4B1P13584 511 aa13.47□□□□□ -0.25
SF1-202ENST00000334944 PCMT1P22061 227 aa13.47□□□□□ -0.25
SF1-202ENST00000334944 CCR7P32248 378 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms