RNA–Protein interactions for RNA: ENST00000334060.8

SHOX-201, Transcript of short stature homeobox, humanhuman

TSL 5 BASIC

Gene SHOX, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-201ENST00000334060 MTFMTQ96DP5 389 aaKnown RBP15.87■□□□□ 0.13
SHOX-201ENST00000334060 LRRN3Q9H3W5 708 aa15.87■□□□□ 0.13
SHOX-201ENST00000334060 UCK1Q9HA47 277 aa15.87■□□□□ 0.13
SHOX-201ENST00000334060 BATF3Q9NR55 127 aa15.87■□□□□ 0.13
SHOX-201ENST00000334060 KCNE1BA0A087WTH5 132 aa15.87■□□□□ 0.13
SHOX-201ENST00000334060 TM4SF5O14894 197 aa15.87■□□□□ 0.13
SHOX-201ENST00000334060 EPB42P16452 691 aa15.87■□□□□ 0.13
SHOX-201ENST00000334060 ACP1P24666 158 aa15.87■□□□□ 0.13
SHOX-201ENST00000334060 PRDX1Q06830 199 aaKnown RBP15.87■□□□□ 0.13
SHOX-201ENST00000334060 CYP4F3Q08477 520 aa15.87■□□□□ 0.13
SHOX-201ENST00000334060 STX3Q13277 289 aa15.87■□□□□ 0.13
SHOX-201ENST00000334060 CPSF6Q16630 551 aaKnown RBP eCLIP15.87■□□□□ 0.13
SHOX-201ENST00000334060 XKR6Q5GH73 641 aa15.87■□□□□ 0.13
SHOX-201ENST00000334060 CDKL4Q5MAI5 379 aa15.87■□□□□ 0.13
SHOX-201ENST00000334060 MAVSQ7Z434 540 aa15.87■□□□□ 0.13
SHOX-201ENST00000334060 ADCK2Q7Z695 626 aa15.87■□□□□ 0.13
SHOX-201ENST00000334060 ANKRD53Q8N9V6 530 aa15.87■□□□□ 0.13
SHOX-201ENST00000334060 ZFPM2Q8WW38 1151 aa15.87■□□□□ 0.13
SHOX-201ENST00000334060 SLC5A11Q8WWX8 675 aa15.87■□□□□ 0.13
SHOX-201ENST00000334060 AHCYL2Q96HN2 611 aaKnown RBP15.87■□□□□ 0.13
SHOX-201ENST00000334060 TRAPPC9Q96Q05 1148 aa15.87■□□□□ 0.13
SHOX-201ENST00000334060 DRC3Q9H069 523 aa15.87■□□□□ 0.13
SHOX-201ENST00000334060 GIMAP2Q9UG22 337 aa15.87■□□□□ 0.13
SHOX-201ENST00000334060 ANGPTL3Q9Y5C1 460 aa15.87■□□□□ 0.13
SHOX-201ENST00000334060 PCDHB11Q9Y5F2 797 aa15.87■□□□□ 0.13
SHOX-201ENST00000334060 SPTBP11277 2137 aa15.87■□□□□ 0.13
SHOX-201ENST00000334060 RASSF9O75901 435 aa15.86■□□□□ 0.13
SHOX-201ENST00000334060 WFS1O76024 890 aa15.86■□□□□ 0.13
SHOX-201ENST00000334060 CYP4F2P78329 520 aa15.86■□□□□ 0.13
SHOX-201ENST00000334060 CSNK1G2P78368 415 aa15.86■□□□□ 0.13
SHOX-201ENST00000334060 SLBPQ14493 270 aaKnown RBP eCLIP15.86■□□□□ 0.13
SHOX-201ENST00000334060 FRMPD2BQ6IN97 320 aa15.86■□□□□ 0.13
SHOX-201ENST00000334060 RIPOR1Q6ZS17 1223 aa15.86■□□□□ 0.13
SHOX-201ENST00000334060 VN1R5Q7Z5H4 357 aa15.86■□□□□ 0.13
SHOX-201ENST00000334060 RAB44Q7Z6P3 723 aaPredicted RBP15.86■□□□□ 0.13
SHOX-201ENST00000334060 RBM12BQ8IXT5 1001 aaKnown RBP15.86■□□□□ 0.13
SHOX-201ENST00000334060 TCAIMQ8N3R3 496 aa15.86■□□□□ 0.13
SHOX-201ENST00000334060 LDHAL6BQ9BYZ2 381 aaPredicted RBP15.86■□□□□ 0.13
SHOX-201ENST00000334060 MRPS30Q9NP92 439 aaKnown RBP15.86■□□□□ 0.13
SHOX-201ENST00000334060 ZNF490Q9ULM2 529 aaPredicted RBP15.86■□□□□ 0.13
SHOX-201ENST00000334060 BTRCQ9Y297 605 aa15.86■□□□□ 0.13
SHOX-201ENST00000334060 ADAMTS20P59510 1910 aa15.86■□□□□ 0.13
SHOX-201ENST00000334060 KIF26BQ2KJY2 2108 aa15.86■□□□□ 0.13
SHOX-201ENST00000334060 C2orf74A8MZ97 194 aa15.86■□□□□ 0.13
SHOX-201ENST00000334060 ANKRD65E5RJM6 399 aa15.86■□□□□ 0.13
SHOX-201ENST00000334060 TBX6O95947 436 aaPredicted RBP15.86■□□□□ 0.13
SHOX-201ENST00000334060 LCP2Q13094 533 aa15.86■□□□□ 0.13
SHOX-201ENST00000334060 SGO1Q5FBB7 561 aa15.86■□□□□ 0.13
SHOX-201ENST00000334060 SH2D4BQ5SQS7 431 aa15.86■□□□□ 0.13
SHOX-201ENST00000334060 VWA5B1Q5TIE3 1220 aa15.86■□□□□ 0.13
SHOX-201ENST00000334060 DHRS13Q6UX07 377 aa15.86■□□□□ 0.13
SHOX-201ENST00000334060 FAM129CQ86XR2 697 aa15.86■□□□□ 0.13
SHOX-201ENST00000334060 LRRC34Q8IZ02 419 aa15.86■□□□□ 0.13
SHOX-201ENST00000334060 ATP6V1E2Q96A05 226 aa15.86■□□□□ 0.13
SHOX-201ENST00000334060 MAGEB18Q96M61 343 aa15.86■□□□□ 0.13
SHOX-201ENST00000334060 RAB11FIP5Q9BXF6 653 aa15.86■□□□□ 0.13
SHOX-201ENST00000334060 AICDAQ9GZX7 198 aa15.86■□□□□ 0.13
SHOX-201ENST00000334060 TUBB1Q9H4B7 451 aa15.86■□□□□ 0.13
SHOX-201ENST00000334060 STARD5Q9NSY2 213 aa15.86■□□□□ 0.13
SHOX-201ENST00000334060 FGFR1OP2Q9NVK5 253 aa15.86■□□□□ 0.13
SHOX-201ENST00000334060 MID2Q9UJV3 735 aa15.86■□□□□ 0.13
SHOX-201ENST00000334060 TNPO3Q9Y5L0 923 aaKnown RBP15.86■□□□□ 0.13
SHOX-201ENST00000334060 LOC105369274A0A096LPK9 316 aa15.85■□□□□ 0.13
SHOX-201ENST00000334060 LOC102723532A0A0G2JNH3 316 aa15.85■□□□□ 0.13
SHOX-201ENST00000334060 FAM107AO95990 144 aa15.85■□□□□ 0.13
SHOX-201ENST00000334060 C9P02748 559 aa15.85■□□□□ 0.13
SHOX-201ENST00000334060 CAPN1P07384 714 aa15.85■□□□□ 0.13
SHOX-201ENST00000334060 BCL6P41182 706 aa15.85■□□□□ 0.13
SHOX-201ENST00000334060 GPR3P46089 330 aa15.85■□□□□ 0.13
SHOX-201ENST00000334060 CCNG1P51959 295 aa15.85■□□□□ 0.13
SHOX-201ENST00000334060 EPHA4P54764 986 aa15.85■□□□□ 0.13
SHOX-201ENST00000334060 KIR2DS3Q14952 304 aa15.85■□□□□ 0.13
SHOX-201ENST00000334060 TRIP6Q15654 476 aaKnown RBP15.85■□□□□ 0.13
SHOX-201ENST00000334060 SNCBQ16143 134 aa15.85■□□□□ 0.13
SHOX-201ENST00000334060 PRAMEF17Q5VTA0 474 aa15.85■□□□□ 0.13
SHOX-201ENST00000334060 ZNF425Q6IV72 752 aa15.85■□□□□ 0.13
SHOX-201ENST00000334060 NXPE4Q6UWF7 544 aa15.85■□□□□ 0.13
SHOX-201ENST00000334060 C17orf64Q86WR6 236 aa15.85■□□□□ 0.13
SHOX-201ENST00000334060 OR4N4Q8N0Y3 316 aa15.85■□□□□ 0.13
SHOX-201ENST00000334060 LRRC8CQ8TDW0 803 aa15.85■□□□□ 0.13
SHOX-201ENST00000334060 ACTR8Q9H981 624 aa15.85■□□□□ 0.13
SHOX-201ENST00000334060 A0A0J9YVX5 310 aa15.84■□□□□ 0.13
SHOX-201ENST00000334060 IGHV5-10-1A0A0J9YXX1 117 aa15.84■□□□□ 0.13
SHOX-201ENST00000334060 NTN3O00634 580 aaPredicted RBP15.84■□□□□ 0.13
SHOX-201ENST00000334060 DUX1O43812 170 aa15.84■□□□□ 0.13
SHOX-201ENST00000334060 NPHS1O60500 1241 aa15.84■□□□□ 0.13
SHOX-201ENST00000334060 SKAP2O75563 359 aaPredicted RBP15.84■□□□□ 0.13
SHOX-201ENST00000334060 HSPA4LO95757 839 aa15.84■□□□□ 0.13
SHOX-201ENST00000334060 B3GALT4O96024 378 aa15.84■□□□□ 0.13
SHOX-201ENST00000334060 CDH3P22223 829 aa15.84■□□□□ 0.13
SHOX-201ENST00000334060 IRF8Q02556 426 aa15.84■□□□□ 0.13
SHOX-201ENST00000334060 FBXO42Q6P3S6 717 aa15.84■□□□□ 0.13
SHOX-201ENST00000334060 NAT6Q93015 286 aa15.84■□□□□ 0.13
SHOX-201ENST00000334060 PMEPA1Q969W9 287 aa15.84■□□□□ 0.13
SHOX-201ENST00000334060 CCDC126Q96EE4 140 aa15.84■□□□□ 0.13
SHOX-201ENST00000334060 DYRK1BQ9Y463 629 aa15.84■□□□□ 0.13
SHOX-201ENST00000334060 KCNE2Q9Y6J6 123 aa15.84■□□□□ 0.13
SHOX-201ENST00000334060 MDC1Q14676 2089 aaKnown RBP15.84■□□□□ 0.13
SHOX-201ENST00000334060 FAM221BA6H8Z2 402 aa15.84■□□□□ 0.13
SHOX-201ENST00000334060 C4orf51C9J302 202 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms