RNA–Protein interactions for RNA: ENST00000330045.11

BRCC3-201, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-201ENST00000330045 SRSF11Q05519 484 aaKnown RBP14.89□□□□□ -0.03
BRCC3-201ENST00000330045 SFSWAPQ12872 951 aaKnown RBP14.89□□□□□ -0.03
BRCC3-201ENST00000330045 LMAN2Q12907 356 aa14.89□□□□□ -0.03
BRCC3-201ENST00000330045 PRAMEF9Q5VWM5 478 aa14.89□□□□□ -0.03
BRCC3-201ENST00000330045 RFLNAQ6ZTI6 216 aa14.89□□□□□ -0.03
BRCC3-201ENST00000330045 VTCN1Q7Z7D3 282 aa14.89□□□□□ -0.03
BRCC3-201ENST00000330045 SYT12Q8IV01 421 aa14.89□□□□□ -0.03
BRCC3-201ENST00000330045 NDNFQ8TB73 568 aa14.89□□□□□ -0.03
BRCC3-201ENST00000330045 S100ZQ8WXG8 99 aa14.89□□□□□ -0.03
BRCC3-201ENST00000330045 YIPF6Q96EC8 236 aa14.89□□□□□ -0.03
BRCC3-201ENST00000330045 DAPK2Q9UIK4 370 aa14.89□□□□□ -0.03
BRCC3-201ENST00000330045 PLXNB3Q9ULL4 1909 aa14.89□□□□□ -0.03
BRCC3-201ENST00000330045 SERTM1A2A2V5 107 aa14.89□□□□□ -0.03
BRCC3-201ENST00000330045 PRRG1O14668 218 aa14.89□□□□□ -0.03
BRCC3-201ENST00000330045 NUAK1O60285 661 aa14.89□□□□□ -0.03
BRCC3-201ENST00000330045 ATP6V1G1O75348 118 aa14.89□□□□□ -0.03
BRCC3-201ENST00000330045 FKBP9O95302 570 aa14.89□□□□□ -0.03
BRCC3-201ENST00000330045 SEMG1P04279 462 aa14.89□□□□□ -0.03
BRCC3-201ENST00000330045 ITPKAP23677 461 aa14.89□□□□□ -0.03
BRCC3-201ENST00000330045 ABRQ12979 859 aa14.89□□□□□ -0.03
BRCC3-201ENST00000330045 CLCA4Q14CN2 919 aa14.89□□□□□ -0.03
BRCC3-201ENST00000330045 DGUOKQ16854 277 aa14.89□□□□□ -0.03
BRCC3-201ENST00000330045 SYT6Q5T7P8 510 aaPredicted RBP14.89□□□□□ -0.03
BRCC3-201ENST00000330045 ERICH5Q6P6B1 374 aa14.89□□□□□ -0.03
BRCC3-201ENST00000330045 P2RY8Q86VZ1 359 aa14.89□□□□□ -0.03
BRCC3-201ENST00000330045 VRK3Q8IV63 474 aa14.89□□□□□ -0.03
BRCC3-201ENST00000330045 FAM217AQ8IXS0 508 aa14.89□□□□□ -0.03
BRCC3-201ENST00000330045 RNF175Q8N4F7 328 aa14.89□□□□□ -0.03
BRCC3-201ENST00000330045 ALPK1Q96QP1 1244 aa14.89□□□□□ -0.03
BRCC3-201ENST00000330045 P2RY13Q9BPV8 354 aa14.89□□□□□ -0.03
BRCC3-201ENST00000330045 C11orf49Q9H6J7 331 aa14.89□□□□□ -0.03
BRCC3-201ENST00000330045 DNAJC11Q9NVH1 559 aa14.89□□□□□ -0.03
BRCC3-201ENST00000330045 TRNAU1APQ9NX07 287 aaKnown RBP14.89□□□□□ -0.03
BRCC3-201ENST00000330045 KIF17Q9P2E2 1029 aa14.89□□□□□ -0.03
BRCC3-201ENST00000330045 NDRG4Q9ULP0 352 aaKnown RBP14.89□□□□□ -0.03
BRCC3-201ENST00000330045 SAMHD1Q9Y3Z3 626 aaKnown RBP14.89□□□□□ -0.03
BRCC3-201ENST00000330045 MAGEB17A8MXT2 336 aa14.88□□□□□ -0.03
BRCC3-201ENST00000330045 BNIP3LO60238 219 aa14.88□□□□□ -0.03
BRCC3-201ENST00000330045 SERPINB7O75635 380 aa14.88□□□□□ -0.03
BRCC3-201ENST00000330045 MT-ND2P03891 347 aa14.88□□□□□ -0.03
BRCC3-201ENST00000330045 PSMB9P28065 219 aa14.88□□□□□ -0.03
BRCC3-201ENST00000330045 HOXA9P31269 272 aa14.88□□□□□ -0.03
BRCC3-201ENST00000330045 MASP1P48740 699 aa14.88□□□□□ -0.03
BRCC3-201ENST00000330045 VBP1P61758 197 aa14.88□□□□□ -0.03
BRCC3-201ENST00000330045 CHIT1Q13231 466 aa14.88□□□□□ -0.03
BRCC3-201ENST00000330045 DGCR6Q14129 220 aa14.88□□□□□ -0.03
BRCC3-201ENST00000330045 UGT8Q16880 541 aa14.88□□□□□ -0.03
BRCC3-201ENST00000330045 C1orf53Q5VUE5 145 aa14.88□□□□□ -0.03
BRCC3-201ENST00000330045 USP45Q70EL2 814 aa14.88□□□□□ -0.03
BRCC3-201ENST00000330045 CBLL1Q75N03 491 aa14.88□□□□□ -0.03
BRCC3-201ENST00000330045 EIF3MQ7L2H7 374 aaKnown RBP14.88□□□□□ -0.03
BRCC3-201ENST00000330045 METTL3Q86U44 580 aaKnown RBP14.88□□□□□ -0.03
BRCC3-201ENST00000330045 TSPYL5Q86VY4 417 aaPredicted RBP14.88□□□□□ -0.03
BRCC3-201ENST00000330045 PTOV1Q86YD1 416 aa14.88□□□□□ -0.03
BRCC3-201ENST00000330045 SVOPQ8N4V2 548 aa14.88□□□□□ -0.03
BRCC3-201ENST00000330045 ZFP90Q8TF47 636 aa14.88□□□□□ -0.03
BRCC3-201ENST00000330045 MROQ9BYG7 248 aa14.88□□□□□ -0.03
BRCC3-201ENST00000330045 ASPSCR1Q9BZE9 553 aa14.88□□□□□ -0.03
BRCC3-201ENST00000330045 ZNF334Q9HCZ1 680 aaPredicted RBP14.88□□□□□ -0.03
BRCC3-201ENST00000330045 KRT84Q9NSB2 600 aa14.88□□□□□ -0.03
BRCC3-201ENST00000330045 KIAA1522Q9P206 1035 aaPredicted RBP14.88□□□□□ -0.03
BRCC3-201ENST00000330045 MBD1Q9UIS9 605 aaPredicted RBP14.88□□□□□ -0.03
BRCC3-201ENST00000330045 IGLV3-16A0A075B6K0 115 aa14.88□□□□□ -0.03
BRCC3-201ENST00000330045 KRT87PA6NCN2 255 aa14.88□□□□□ -0.03
BRCC3-201ENST00000330045 RGS10O43665 173 aa14.88□□□□□ -0.03
BRCC3-201ENST00000330045 SCN2BO60939 215 aa14.88□□□□□ -0.03
BRCC3-201ENST00000330045 NADKO95544 446 aaPredicted RBP14.88□□□□□ -0.03
BRCC3-201ENST00000330045 CPSF4O95639 269 aaKnown RBP14.88□□□□□ -0.03
BRCC3-201ENST00000330045 MPC1LP0DKB6 136 aa14.88□□□□□ -0.03
BRCC3-201ENST00000330045 JUPP14923 745 aa14.88□□□□□ -0.03
BRCC3-201ENST00000330045 CYP2A7P20853 494 aa14.88□□□□□ -0.03
BRCC3-201ENST00000330045 TPP2P29144 1249 aaPredicted RBP14.88□□□□□ -0.03
BRCC3-201ENST00000330045 ALDH4A1P30038 563 aa14.88□□□□□ -0.03
BRCC3-201ENST00000330045 CD70P32970 193 aa14.88□□□□□ -0.03
BRCC3-201ENST00000330045 ST13P50502 369 aaKnown RBP14.88□□□□□ -0.03
BRCC3-201ENST00000330045 WNT3P56703 355 aa14.88□□□□□ -0.03
BRCC3-201ENST00000330045 WDR5P61964 334 aaKnown RBP14.88□□□□□ -0.03
BRCC3-201ENST00000330045 SNRPD1P62314 119 aaKnown RBP14.88□□□□□ -0.03
BRCC3-201ENST00000330045 MAD2L1BPQ15013 274 aaPredicted RBP14.88□□□□□ -0.03
BRCC3-201ENST00000330045 OXA1LQ15070 435 aa14.88□□□□□ -0.03
BRCC3-201ENST00000330045 SMN1Q16637 294 aaKnown RBP14.88□□□□□ -0.03
BRCC3-201ENST00000330045 PLEKHG6Q3KR16 790 aa14.88□□□□□ -0.03
BRCC3-201ENST00000330045 ATG16L2Q8NAA4 619 aa14.88□□□□□ -0.03
BRCC3-201ENST00000330045 ZNF689Q96CS4 500 aaPredicted RBP14.88□□□□□ -0.03
BRCC3-201ENST00000330045 HSH2DQ96JZ2 352 aa14.88□□□□□ -0.03
BRCC3-201ENST00000330045 FCRL1Q96LA6 429 aa14.88□□□□□ -0.03
BRCC3-201ENST00000330045 ZNF300Q96RE9 604 aaPredicted RBP14.88□□□□□ -0.03
BRCC3-201ENST00000330045 MYOCQ99972 504 aa14.88□□□□□ -0.03
BRCC3-201ENST00000330045 RHNO1Q9BSD3 238 aa14.88□□□□□ -0.03
BRCC3-201ENST00000330045 ATG10Q9H0Y0 220 aa14.88□□□□□ -0.03
BRCC3-201ENST00000330045 RC3H2Q9HBD1 1191 aaKnown RBP14.88□□□□□ -0.03
BRCC3-201ENST00000330045 CCNB1IP1Q9NPC3 277 aa14.88□□□□□ -0.03
BRCC3-201ENST00000330045 LSM7Q9UK45 103 aaKnown RBP14.88□□□□□ -0.03
BRCC3-201ENST00000330045 UPK3BL1B0FP48 263 aa14.87□□□□□ -0.03
BRCC3-201ENST00000330045 UPK3BL2E5RIL1 263 aa14.87□□□□□ -0.03
BRCC3-201ENST00000330045 GFYI3L273 518 aa14.87□□□□□ -0.03
BRCC3-201ENST00000330045 FAM20BO75063 409 aa14.87□□□□□ -0.03
BRCC3-201ENST00000330045 FADS2O95864 444 aaKnown RBP14.87□□□□□ -0.03
BRCC3-201ENST00000330045 COX7A2P14406 83 aa14.87□□□□□ -0.03
BRCC3-201ENST00000330045 LHCGRP22888 699 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms