RNA–Protein interactions for RNA: ENST00000317201.6

HOXA3-201, Transcript of homeobox A3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HOXA3, Length 2,761 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-201ENST00000317201 CSHL1Q14406 222 aa14.29□□□□□ -0.12
HOXA3-201ENST00000317201 ZIK1Q3SY52 487 aaPredicted RBP14.29□□□□□ -0.12
HOXA3-201ENST00000317201 TMEM198Q66K66 360 aa14.29□□□□□ -0.12
HOXA3-201ENST00000317201 CRTC1Q6UUV9 634 aa14.29□□□□□ -0.12
HOXA3-201ENST00000317201 TMPRSS9Q7Z410 1059 aa14.29□□□□□ -0.12
HOXA3-201ENST00000317201 KCNJ9Q92806 393 aa14.29□□□□□ -0.12
HOXA3-201ENST00000317201 SORT1Q99523 831 aa14.29□□□□□ -0.12
HOXA3-201ENST00000317201 LIN7BQ9HAP6 207 aa14.29□□□□□ -0.12
HOXA3-201ENST00000317201 BPIFA1Q9NP55 256 aa14.29□□□□□ -0.12
HOXA3-201ENST00000317201 CIB4A0PJX0 185 aa14.29□□□□□ -0.12
HOXA3-201ENST00000317201 GAPDHSO14556 408 aaPredicted RBP14.29□□□□□ -0.12
HOXA3-201ENST00000317201 NRP2O60462 931 aa14.29□□□□□ -0.12
HOXA3-201ENST00000317201 CLDN7O95471 211 aa14.29□□□□□ -0.12
HOXA3-201ENST00000317201 CPNE6O95741 557 aa14.29□□□□□ -0.12
HOXA3-201ENST00000317201 EIF2DP41214 584 aaKnown RBP14.29□□□□□ -0.12
HOXA3-201ENST00000317201 HTR3AP46098 478 aa14.29□□□□□ -0.12
HOXA3-201ENST00000317201 HIST2H2ACQ16777 129 aaPredicted RBP14.29□□□□□ -0.12
HOXA3-201ENST00000317201 TCEAL5Q5H9L2 206 aa14.29□□□□□ -0.12
HOXA3-201ENST00000317201 TMEM207Q6UWW9 146 aa14.29□□□□□ -0.12
HOXA3-201ENST00000317201 SLC22A9Q8IVM8 553 aa14.29□□□□□ -0.12
HOXA3-201ENST00000317201 FKBP10Q96AY3 582 aa14.29□□□□□ -0.12
HOXA3-201ENST00000317201 ELOVL2Q9NXB9 296 aa14.29□□□□□ -0.12
HOXA3-201ENST00000317201 DEC1Q9P2X7 70 aa14.29□□□□□ -0.12
HOXA3-201ENST00000317201 KIAA1549LQ6ZVL6 1849 aa14.29□□□□□ -0.12
HOXA3-201ENST00000317201 TEX51A0A1B0GUA7 166 aa14.28□□□□□ -0.12
HOXA3-201ENST00000317201 TRIM64A6NGJ6 449 aa14.28□□□□□ -0.12
HOXA3-201ENST00000317201 NPIPB15A6NHN6 443 aaPredicted RBP14.28□□□□□ -0.12
HOXA3-201ENST00000317201 NUPL2O15504 423 aaKnown RBP14.28□□□□□ -0.12
HOXA3-201ENST00000317201 AKR7A2O43488 359 aa14.28□□□□□ -0.12
HOXA3-201ENST00000317201 DLX3O60479 287 aa14.28□□□□□ -0.12
HOXA3-201ENST00000317201 NPHS1O60500 1241 aa14.28□□□□□ -0.12
HOXA3-201ENST00000317201 ATG13O75143 517 aa14.28□□□□□ -0.12
HOXA3-201ENST00000317201 CYP2A6P11509 494 aaPredicted RBP14.28□□□□□ -0.12
HOXA3-201ENST00000317201 ARSAP15289 507 aa14.28□□□□□ -0.12
HOXA3-201ENST00000317201 CD1DP15813 335 aa14.28□□□□□ -0.12
HOXA3-201ENST00000317201 HLCSP50747 726 aa14.28□□□□□ -0.12
HOXA3-201ENST00000317201 PPP5CP53041 499 aa14.28□□□□□ -0.12
HOXA3-201ENST00000317201 ST8SIA6P61647 398 aa14.28□□□□□ -0.12
HOXA3-201ENST00000317201 NFKB2Q00653 900 aa14.28□□□□□ -0.12
HOXA3-201ENST00000317201 NFATC2Q13469 925 aa14.28□□□□□ -0.12
HOXA3-201ENST00000317201 SLC36A3Q495N2 470 aa14.28□□□□□ -0.12
HOXA3-201ENST00000317201 ATAT1Q5SQI0 421 aa14.28□□□□□ -0.12
HOXA3-201ENST00000317201 C12orf40Q86WS4 652 aa14.28□□□□□ -0.12
HOXA3-201ENST00000317201 EPHX4Q8IUS5 362 aa14.28□□□□□ -0.12
HOXA3-201ENST00000317201 NKAPQ8N5F7 415 aaKnown RBP14.28□□□□□ -0.12
HOXA3-201ENST00000317201 ZBTB44Q8NCP5 570 aa14.28□□□□□ -0.12
HOXA3-201ENST00000317201 OR7A2PQ8NGA2 310 aa14.28□□□□□ -0.12
HOXA3-201ENST00000317201 TUBA1CQ9BQE3 449 aa14.28□□□□□ -0.12
HOXA3-201ENST00000317201 GATA5Q9BWX5 397 aaPredicted RBP14.28□□□□□ -0.12
HOXA3-201ENST00000317201 DERL2Q9GZP9 239 aa14.28□□□□□ -0.12
HOXA3-201ENST00000317201 TFB2MQ9H5Q4 396 aaKnown RBP14.28□□□□□ -0.12
HOXA3-201ENST00000317201 BRD9Q9H8M2 597 aa14.28□□□□□ -0.12
HOXA3-201ENST00000317201 RANGRFQ9HD47 186 aaPredicted RBP14.28□□□□□ -0.12
HOXA3-201ENST00000317201 RAD18Q9NS91 495 aa14.28□□□□□ -0.12
HOXA3-201ENST00000317201 ACOXLQ9NUZ1 547 aa14.28□□□□□ -0.12
HOXA3-201ENST00000317201 GLTPQ9NZD2 209 aa14.28□□□□□ -0.12
HOXA3-201ENST00000317201 FAM8A1Q9UBU6 413 aa14.28□□□□□ -0.12
HOXA3-201ENST00000317201 IL36AQ9UHA7 158 aa14.28□□□□□ -0.12
HOXA3-201ENST00000317201 MED16Q9Y2X0 877 aa14.28□□□□□ -0.12
HOXA3-201ENST00000317201 MYO7AQ13402 2215 aa14.28□□□□□ -0.12
HOXA3-201ENST00000317201 GLYATL1P3A0A0U1RQE8 302 aa14.28□□□□□ -0.12
HOXA3-201ENST00000317201 H3BMM5 538 aa14.28□□□□□ -0.12
HOXA3-201ENST00000317201 TRIM24O15164 1050 aa14.28□□□□□ -0.12
HOXA3-201ENST00000317201 UGT2B11O75310 529 aa14.28□□□□□ -0.12
HOXA3-201ENST00000317201 VPS26AO75436 327 aa14.28□□□□□ -0.12
HOXA3-201ENST00000317201 RHOBTB1O94844 696 aa14.28□□□□□ -0.12
HOXA3-201ENST00000317201 INMTO95050 263 aa14.28□□□□□ -0.12
HOXA3-201ENST00000317201 BPIP17213 487 aa14.28□□□□□ -0.12
HOXA3-201ENST00000317201 GLRBP48167 497 aa14.28□□□□□ -0.12
HOXA3-201ENST00000317201 PTPRRQ15256 657 aa14.28□□□□□ -0.12
HOXA3-201ENST00000317201 ZNF544Q6NX49 715 aa14.28□□□□□ -0.12
HOXA3-201ENST00000317201 ZNF773Q6PK81 442 aa14.28□□□□□ -0.12
HOXA3-201ENST00000317201 PIWIL4Q7Z3Z4 852 aaKnown RBP14.28□□□□□ -0.12
HOXA3-201ENST00000317201 TDHQ8IZJ6 230 aa14.28□□□□□ -0.12
HOXA3-201ENST00000317201 METTL4Q8N3J2 472 aa14.28□□□□□ -0.12
HOXA3-201ENST00000317201 CHST14Q8NCH0 376 aa14.28□□□□□ -0.12
HOXA3-201ENST00000317201 VANGL1Q8TAA9 524 aaPredicted RBP14.28□□□□□ -0.12
HOXA3-201ENST00000317201 CANT1Q8WVQ1 401 aa14.28□□□□□ -0.12
HOXA3-201ENST00000317201 ELSPBP1Q96BH3 223 aa14.28□□□□□ -0.12
HOXA3-201ENST00000317201 TMEM80Q96HE8 168 aa14.28□□□□□ -0.12
HOXA3-201ENST00000317201 TRAF4Q9BUZ4 470 aaPredicted RBP14.28□□□□□ -0.12
HOXA3-201ENST00000317201 TRIM15Q9C019 465 aa14.28□□□□□ -0.12
HOXA3-201ENST00000317201 IL26Q9NPH9 171 aa14.28□□□□□ -0.12
HOXA3-201ENST00000317201 HPS4Q9NQG7 708 aa14.28□□□□□ -0.12
HOXA3-201ENST00000317201 DCAF16Q9NXF7 216 aa14.28□□□□□ -0.12
HOXA3-201ENST00000317201 NFKBIL1Q9UBC1 381 aaPredicted RBP14.28□□□□□ -0.12
HOXA3-201ENST00000317201 MUC22E2RYF6 1773 aaPredicted RBP14.28□□□□□ -0.12
HOXA3-201ENST00000317201 UBA6A0AVT1 1052 aaPredicted RBP14.28□□□□□ -0.12
HOXA3-201ENST00000317201 PRAMEF1O95521 474 aa14.28□□□□□ -0.12
HOXA3-201ENST00000317201 PRSS56P0CW18 603 aa14.28□□□□□ -0.12
HOXA3-201ENST00000317201 ZNF7P17097 686 aaPredicted RBP14.28□□□□□ -0.12
HOXA3-201ENST00000317201 CTF1Q16619 201 aa14.28□□□□□ -0.12
HOXA3-201ENST00000317201 IMPG1Q17R60 797 aa14.28□□□□□ -0.12
HOXA3-201ENST00000317201 CORO6Q6QEF8 472 aa14.28□□□□□ -0.12
HOXA3-201ENST00000317201 VITQ6UXI7 678 aa14.28□□□□□ -0.12
HOXA3-201ENST00000317201 ISCA2Q86U28 154 aa14.28□□□□□ -0.12
HOXA3-201ENST00000317201 CLYBLQ8N0X4 340 aa14.28□□□□□ -0.12
HOXA3-201ENST00000317201 CYB5D2Q8WUJ1 264 aa14.28□□□□□ -0.12
HOXA3-201ENST00000317201 PCNPQ8WW12 178 aaKnown RBP14.28□□□□□ -0.12
HOXA3-201ENST00000317201 PIP5K1AQ99755 562 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms