RNA–Protein interactions for RNA: ENST00000309660.9

PTPN2-201, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 3,467 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-201ENST00000309660 TANC1Q9C0D5 1861 aa11.17□□□□□ -0.62
PTPN2-201ENST00000309660 TRBV5-3A0A0A0MS03 114 aa11.17□□□□□ -0.62
PTPN2-201ENST00000309660 ANTXRLA6NF34 631 aa11.17□□□□□ -0.62
PTPN2-201ENST00000309660 MMP20O60882 483 aa11.17□□□□□ -0.62
PTPN2-201ENST00000309660 IGFBP5P24593 272 aa11.17□□□□□ -0.62
PTPN2-201ENST00000309660 IMPA1P29218 277 aa11.17□□□□□ -0.62
PTPN2-201ENST00000309660 GPR1P46091 355 aa11.17□□□□□ -0.62
PTPN2-201ENST00000309660 ENTPD1P49961 510 aa11.17□□□□□ -0.62
PTPN2-201ENST00000309660 HLCSP50747 726 aa11.17□□□□□ -0.62
PTPN2-201ENST00000309660 DCTN2Q13561 401 aaKnown RBP11.17□□□□□ -0.62
PTPN2-201ENST00000309660 SMU1Q2TAY7 513 aa11.17□□□□□ -0.62
PTPN2-201ENST00000309660 CPTPQ5TA50 214 aa11.17□□□□□ -0.62
PTPN2-201ENST00000309660 XKR5Q6UX68 686 aa11.17□□□□□ -0.62
PTPN2-201ENST00000309660 CCDC81Q6ZN84 652 aa11.17□□□□□ -0.62
PTPN2-201ENST00000309660 USP51Q70EK9 711 aa11.17□□□□□ -0.62
PTPN2-201ENST00000309660 ZCCHC7Q8N3Z6 543 aaKnown RBP11.17□□□□□ -0.62
PTPN2-201ENST00000309660 OR7G3Q8NG95 312 aa11.17□□□□□ -0.62
PTPN2-201ENST00000309660 SAMD11Q96NU1 681 aa11.17□□□□□ -0.62
PTPN2-201ENST00000309660 LRRC3BQ96PB8 259 aa11.17□□□□□ -0.62
PTPN2-201ENST00000309660 OR51B5Q9H339 312 aa11.17□□□□□ -0.62
PTPN2-201ENST00000309660 TPT1P8Q9HAU6 139 aa11.17□□□□□ -0.62
PTPN2-201ENST00000309660 TUBA8Q9NY65 449 aaPredicted RBP11.17□□□□□ -0.62
PTPN2-201ENST00000309660 PNMA8BQ9ULN7 279 aaPredicted RBP11.17□□□□□ -0.62
PTPN2-201ENST00000309660 MAFFQ9ULX9 164 aa11.17□□□□□ -0.62
PTPN2-201ENST00000309660 PLAGL1Q9UM63 463 aa11.17□□□□□ -0.62
PTPN2-201ENST00000309660 ERVK-11Q9UQG0 969 aa11.17□□□□□ -0.62
PTPN2-201ENST00000309660 SAMHD1Q9Y3Z3 626 aaKnown RBP11.17□□□□□ -0.62
PTPN2-201ENST00000309660 CFAP20Q9Y6A4 193 aaKnown RBP11.17□□□□□ -0.62
PTPN2-201ENST00000309660 LOC100130705A0A1B0GUX0 176 aa11.16□□□□□ -0.62
PTPN2-201ENST00000309660 H3BMQ9 156 aa11.16□□□□□ -0.62
PTPN2-201ENST00000309660 YY2O15391 372 aa11.16□□□□□ -0.62
PTPN2-201ENST00000309660 FGBP02675 491 aa11.16□□□□□ -0.62
PTPN2-201ENST00000309660 ZNF182P17025 639 aaPredicted RBP11.16□□□□□ -0.62
PTPN2-201ENST00000309660 CRATP43155 626 aa11.16□□□□□ -0.62
PTPN2-201ENST00000309660 RAD23AP54725 363 aa11.16□□□□□ -0.62
PTPN2-201ENST00000309660 GGTA1PQ4G0N0 100 aa11.16□□□□□ -0.62
PTPN2-201ENST00000309660 LRIF1Q5T3J3 769 aa11.16□□□□□ -0.62
PTPN2-201ENST00000309660 CEP68Q76N32 757 aa11.16□□□□□ -0.62
PTPN2-201ENST00000309660 DDHD1Q8NEL9 900 aa11.16□□□□□ -0.62
PTPN2-201ENST00000309660 B4GALNT2Q8NHY0 566 aa11.16□□□□□ -0.62
PTPN2-201ENST00000309660 FBXL8Q96CD0 374 aa11.16□□□□□ -0.62
PTPN2-201ENST00000309660 MRGPRX3Q96LB0 322 aa11.16□□□□□ -0.62
PTPN2-201ENST00000309660 COG8Q96MW5 612 aa11.16□□□□□ -0.62
PTPN2-201ENST00000309660 IL17FQ96PD4 163 aa11.16□□□□□ -0.62
PTPN2-201ENST00000309660 MBOAT4Q96T53 435 aa11.16□□□□□ -0.62
PTPN2-201ENST00000309660 CCM2Q9BSQ5 444 aa11.16□□□□□ -0.62
PTPN2-201ENST00000309660 ASPSCR1Q9BZE9 553 aa11.16□□□□□ -0.62
PTPN2-201ENST00000309660 ASIC5Q9NY37 505 aa11.16□□□□□ -0.62
PTPN2-201ENST00000309660 RUVBL1Q9Y265 456 aaKnown RBP11.16□□□□□ -0.62
PTPN2-201ENST00000309660 TDRKHQ9Y2W6 561 aaKnown RBP11.16□□□□□ -0.62
PTPN2-201ENST00000309660 TMED5Q9Y3A6 229 aa11.16□□□□□ -0.62
PTPN2-201ENST00000309660 SNX5Q9Y5X3 404 aa11.16□□□□□ -0.62
PTPN2-201ENST00000309660 EIF3FO00303 357 aaPredicted RBP11.16□□□□□ -0.62
PTPN2-201ENST00000309660 EFCAB14O75071 495 aa11.16□□□□□ -0.62
PTPN2-201ENST00000309660 SLCO2B1O94956 709 aa11.16□□□□□ -0.62
PTPN2-201ENST00000309660 RETP07949 1114 aa11.16□□□□□ -0.62
PTPN2-201ENST00000309660 TNFRSF1BP20333 461 aa11.16□□□□□ -0.62
PTPN2-201ENST00000309660 MATN1P21941 496 aa11.16□□□□□ -0.62
PTPN2-201ENST00000309660 PPP2R2BQ00005 443 aa11.16□□□□□ -0.62
PTPN2-201ENST00000309660 BNIP3Q12983 259 aa11.16□□□□□ -0.62
PTPN2-201ENST00000309660 ZNF77Q15935 545 aa11.16□□□□□ -0.62
PTPN2-201ENST00000309660 CYP27C1Q4G0S4 372 aa11.16□□□□□ -0.62
PTPN2-201ENST00000309660 CDKL4Q5MAI5 379 aa11.16□□□□□ -0.62
PTPN2-201ENST00000309660 SFTPA1Q8IWL2 248 aa11.16□□□□□ -0.62
PTPN2-201ENST00000309660 OR5K1Q8NHB7 308 aa11.16□□□□□ -0.62
PTPN2-201ENST00000309660 SPPL2AQ8TCT8 520 aa11.16□□□□□ -0.62
PTPN2-201ENST00000309660 MIPOL1Q8TD10 442 aa11.16□□□□□ -0.62
PTPN2-201ENST00000309660 GAB3Q8WWW8 586 aa11.16□□□□□ -0.62
PTPN2-201ENST00000309660 ATL1Q8WXF7 558 aa11.16□□□□□ -0.62
PTPN2-201ENST00000309660 TESCQ96BS2 214 aa11.16□□□□□ -0.62
PTPN2-201ENST00000309660 RASSF1Q9NS23 344 aa11.16□□□□□ -0.62
PTPN2-201ENST00000309660 PDP1Q9P0J1 537 aaPredicted RBP11.16□□□□□ -0.62
PTPN2-201ENST00000309660 KLHL42Q9P2K6 505 aa11.16□□□□□ -0.62
PTPN2-201ENST00000309660 ATXN10Q9UBB4 475 aa11.16□□□□□ -0.62
PTPN2-201ENST00000309660 SAMD4AQ9UPU9 718 aaKnown RBP11.16□□□□□ -0.62
PTPN2-201ENST00000309660 ZNF451Q9Y4E5 1061 aa11.16□□□□□ -0.62
PTPN2-201ENST00000309660 BCKDKO14874 412 aa11.15□□□□□ -0.62
PTPN2-201ENST00000309660 PRSS23O95084 383 aa11.15□□□□□ -0.62
PTPN2-201ENST00000309660 CCNDBP1O95273 360 aa11.15□□□□□ -0.62
PTPN2-201ENST00000309660 ADH5P11766 374 aa11.15□□□□□ -0.62
PTPN2-201ENST00000309660 PTPN6P29350 595 aa11.15□□□□□ -0.62
PTPN2-201ENST00000309660 FMO3P31513 532 aa11.15□□□□□ -0.62
PTPN2-201ENST00000309660 NRIP1P48552 1158 aa11.15□□□□□ -0.62
PTPN2-201ENST00000309660 TBPL1P62380 186 aa11.15□□□□□ -0.62
PTPN2-201ENST00000309660 HPCAP84074 193 aa11.15□□□□□ -0.62
PTPN2-201ENST00000309660 VLDLRP98155 873 aa11.15□□□□□ -0.62
PTPN2-201ENST00000309660 VMACQ2NL98 169 aa11.15□□□□□ -0.62
PTPN2-201ENST00000309660 CTU2Q2VPK5 515 aaKnown RBP11.15□□□□□ -0.62
PTPN2-201ENST00000309660 LDLRAP1Q5SW96 308 aa11.15□□□□□ -0.62
PTPN2-201ENST00000309660 LIPJQ5W064 366 aa11.15□□□□□ -0.62
PTPN2-201ENST00000309660 ZNF773Q6PK81 442 aa11.15□□□□□ -0.62
PTPN2-201ENST00000309660 OR5AK3PQ8NH89 298 aa11.15□□□□□ -0.62
PTPN2-201ENST00000309660 NXPE3Q969Y0 559 aa11.15□□□□□ -0.62
PTPN2-201ENST00000309660 TIFAQ96CG3 184 aa11.15□□□□□ -0.62
PTPN2-201ENST00000309660 NRBF2Q96F24 287 aa11.15□□□□□ -0.62
PTPN2-201ENST00000309660 HSH2DQ96JZ2 352 aa11.15□□□□□ -0.62
PTPN2-201ENST00000309660 NRTNQ99748 197 aa11.15□□□□□ -0.62
PTPN2-201ENST00000309660 FZD4Q9ULV1 537 aa11.15□□□□□ -0.62
PTPN2-201ENST00000309660 GABRR3A8MPY1 467 aa11.15□□□□□ -0.62
PTPN2-201ENST00000309660 ZNF197O14709 1029 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms