RNA–Protein interactions for RNA: ENST00000308521.9

APOBEC3F-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3F, Length 2,694 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-201ENST00000308521 ZNF382Q96SR6 550 aa10.03□□□□□ -0.8
APOBEC3F-201ENST00000308521 CIPCQ9C0C6 399 aa10.03□□□□□ -0.8
APOBEC3F-201ENST00000308521 TRIT1Q9H3H1 467 aaKnown RBP10.03□□□□□ -0.8
APOBEC3F-201ENST00000308521 ZDHHC6Q9H6R6 413 aa10.03□□□□□ -0.8
APOBEC3F-201ENST00000308521 C3orf18Q9UK00 162 aa10.03□□□□□ -0.8
APOBEC3F-201ENST00000308521 IKZF3Q9UKT9 509 aa10.03□□□□□ -0.8
APOBEC3F-201ENST00000308521 AP3M1Q9Y2T2 418 aa10.03□□□□□ -0.8
APOBEC3F-201ENST00000308521 SPEF1Q9Y4P9 236 aa10.03□□□□□ -0.8
APOBEC3F-201ENST00000308521 ANKRD12Q6UB98 2062 aa10.03□□□□□ -0.8
APOBEC3F-201ENST00000308521 ATG2BQ96BY7 2078 aa10.03□□□□□ -0.8
APOBEC3F-201ENST00000308521 C2orf81A6NN90 581 aa10.02□□□□□ -0.8
APOBEC3F-201ENST00000308521 ZNF197O14709 1029 aa10.02□□□□□ -0.8
APOBEC3F-201ENST00000308521 SHOXO15266 292 aa10.02□□□□□ -0.8
APOBEC3F-201ENST00000308521 STX7O15400 261 aaKnown RBP10.02□□□□□ -0.8
APOBEC3F-201ENST00000308521 OR1I1O60431 355 aa10.02□□□□□ -0.8
APOBEC3F-201ENST00000308521 CLDN7O95471 211 aa10.02□□□□□ -0.8
APOBEC3F-201ENST00000308521 FGF19O95750 216 aa10.02□□□□□ -0.8
APOBEC3F-201ENST00000308521 CST1P01037 141 aa10.02□□□□□ -0.8
APOBEC3F-201ENST00000308521 KRT8P05787 483 aa10.02□□□□□ -0.8
APOBEC3F-201ENST00000308521 GSNP06396 782 aa10.02□□□□□ -0.8
APOBEC3F-201ENST00000308521 PCNAP12004 261 aa10.02□□□□□ -0.8
APOBEC3F-201ENST00000308521 PIGAP37287 484 aa10.02□□□□□ -0.8
APOBEC3F-201ENST00000308521 ZNF140P52738 457 aaPredicted RBP10.02□□□□□ -0.8
APOBEC3F-201ENST00000308521 IFITM3Q01628 133 aa10.02□□□□□ -0.8
APOBEC3F-201ENST00000308521 DHCR24Q15392 516 aa10.02□□□□□ -0.8
APOBEC3F-201ENST00000308521 TSNQ15631 228 aaKnown RBP10.02□□□□□ -0.8
APOBEC3F-201ENST00000308521 RBBP7Q16576 425 aa10.02□□□□□ -0.8
APOBEC3F-201ENST00000308521 DUSP6Q16828 381 aa10.02□□□□□ -0.8
APOBEC3F-201ENST00000308521 PERM1Q5SV97 790 aa10.02□□□□□ -0.8
APOBEC3F-201ENST00000308521 COL13A1Q5TAT6 717 aaPredicted RBP10.02□□□□□ -0.8
APOBEC3F-201ENST00000308521 PSAPL1Q6NUJ1 521 aa10.02□□□□□ -0.8
APOBEC3F-201ENST00000308521 Q6ZSR9 355 aa10.02□□□□□ -0.8
APOBEC3F-201ENST00000308521 PRSS48Q7RTY5 328 aa10.02□□□□□ -0.8
APOBEC3F-201ENST00000308521 TSPAN33Q86UF1 283 aa10.02□□□□□ -0.8
APOBEC3F-201ENST00000308521 ADIPOR2Q86V24 386 aa10.02□□□□□ -0.8
APOBEC3F-201ENST00000308521 SFTPA1Q8IWL2 248 aa10.02□□□□□ -0.8
APOBEC3F-201ENST00000308521 ELMOD2Q8IZ81 293 aa10.02□□□□□ -0.8
APOBEC3F-201ENST00000308521 PIH1D2Q8WWB5 315 aa10.02□□□□□ -0.8
APOBEC3F-201ENST00000308521 YIPF6Q96EC8 236 aa10.02□□□□□ -0.8
APOBEC3F-201ENST00000308521 MYO19Q96H55 970 aa10.02□□□□□ -0.8
APOBEC3F-201ENST00000308521 PPM1MQ96MI6 270 aa10.02□□□□□ -0.8
APOBEC3F-201ENST00000308521 COQ7Q99807 217 aa10.02□□□□□ -0.8
APOBEC3F-201ENST00000308521 GPR63Q9BZJ6 419 aa10.02□□□□□ -0.8
APOBEC3F-201ENST00000308521 CARS2Q9HA77 564 aaKnown RBP10.02□□□□□ -0.8
APOBEC3F-201ENST00000308521 NEUROG3Q9Y4Z2 214 aa10.02□□□□□ -0.8
APOBEC3F-201ENST00000308521 TAF4O00268 1085 aa10.02□□□□□ -0.81
APOBEC3F-201ENST00000308521 ANKRD28O15084 1053 aa10.02□□□□□ -0.81
APOBEC3F-201ENST00000308521 FZD6O60353 706 aa10.02□□□□□ -0.81
APOBEC3F-201ENST00000308521 SCELO95171 688 aa10.02□□□□□ -0.81
APOBEC3F-201ENST00000308521 PGLSO95336 258 aa10.02□□□□□ -0.81
APOBEC3F-201ENST00000308521 ITGAMP11215 1152 aa10.02□□□□□ -0.81
APOBEC3F-201ENST00000308521 IL1RNP18510 177 aa10.02□□□□□ -0.81
APOBEC3F-201ENST00000308521 AGXTP21549 392 aa10.02□□□□□ -0.81
APOBEC3F-201ENST00000308521 CD9P21926 228 aa10.02□□□□□ -0.81
APOBEC3F-201ENST00000308521 LPOP22079 712 aaPredicted RBP10.02□□□□□ -0.81
APOBEC3F-201ENST00000308521 FMO4P31512 558 aa10.02□□□□□ -0.81
APOBEC3F-201ENST00000308521 MC4RP32245 332 aa10.02□□□□□ -0.81
APOBEC3F-201ENST00000308521 CA5AP35218 305 aa10.02□□□□□ -0.81
APOBEC3F-201ENST00000308521 MTPNP58546 118 aa10.02□□□□□ -0.81
APOBEC3F-201ENST00000308521 TAF1AQ15573 450 aaPredicted RBP10.02□□□□□ -0.81
APOBEC3F-201ENST00000308521 ZRANB3Q5FWF4 1079 aa10.02□□□□□ -0.81
APOBEC3F-201ENST00000308521 LURAP1LQ8IV03 231 aa10.02□□□□□ -0.81
APOBEC3F-201ENST00000308521 ADHFE1Q8IWW8 467 aa10.02□□□□□ -0.81
APOBEC3F-201ENST00000308521 NPAS3Q8IXF0 933 aa10.02□□□□□ -0.81
APOBEC3F-201ENST00000308521 CHCHD4Q8N4Q1 142 aa10.02□□□□□ -0.81
APOBEC3F-201ENST00000308521 OR2AP1Q8NGE2 309 aa10.02□□□□□ -0.81
APOBEC3F-201ENST00000308521 VOPP1Q96AW1 172 aa10.02□□□□□ -0.81
APOBEC3F-201ENST00000308521 SLC47A1Q96FL8 570 aa10.02□□□□□ -0.81
APOBEC3F-201ENST00000308521 CENPOQ9BU64 300 aa10.02□□□□□ -0.81
APOBEC3F-201ENST00000308521 ABCG8Q9H221 673 aa10.02□□□□□ -0.81
APOBEC3F-201ENST00000308521 MAGIXQ9H6Y5 334 aa10.02□□□□□ -0.81
APOBEC3F-201ENST00000308521 NLE1Q9NVX2 485 aaPredicted RBP10.02□□□□□ -0.81
APOBEC3F-201ENST00000308521 PAK1IP1Q9NWT1 392 aaPredicted RBP10.02□□□□□ -0.81
APOBEC3F-201ENST00000308521 FAM50BQ9Y247 325 aa10.02□□□□□ -0.81
APOBEC3F-201ENST00000308521 MED16Q9Y2X0 877 aa10.02□□□□□ -0.81
APOBEC3F-201ENST00000308521 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.01□□□□□ -0.81
APOBEC3F-201ENST00000308521 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.01□□□□□ -0.81
APOBEC3F-201ENST00000308521 M0R3G1 203 aa10.01□□□□□ -0.81
APOBEC3F-201ENST00000308521 CDC7O00311 574 aa10.01□□□□□ -0.81
APOBEC3F-201ENST00000308521 SNPHO15079 494 aa10.01□□□□□ -0.81
APOBEC3F-201ENST00000308521 GSTA4O15217 222 aa10.01□□□□□ -0.81
APOBEC3F-201ENST00000308521 MRPS14O60783 128 aaKnown RBP10.01□□□□□ -0.81
APOBEC3F-201ENST00000308521 TMCC2O75069 709 aa10.01□□□□□ -0.81
APOBEC3F-201ENST00000308521 JUNDP17535 347 aa10.01□□□□□ -0.81
APOBEC3F-201ENST00000308521 MSH3P20585 1137 aa10.01□□□□□ -0.81
APOBEC3F-201ENST00000308521 HNF1BP35680 557 aa10.01□□□□□ -0.81
APOBEC3F-201ENST00000308521 SLC6A11P48066 632 aa10.01□□□□□ -0.81
APOBEC3F-201ENST00000308521 AP2S1P53680 142 aaPredicted RBP10.01□□□□□ -0.81
APOBEC3F-201ENST00000308521 EMX1Q04741 257 aaPredicted RBP10.01□□□□□ -0.81
APOBEC3F-201ENST00000308521 PIGFQ07326 219 aa10.01□□□□□ -0.81
APOBEC3F-201ENST00000308521 CDK5R2Q13319 367 aa10.01□□□□□ -0.81
APOBEC3F-201ENST00000308521 KIAA0040Q15053 153 aa10.01□□□□□ -0.81
APOBEC3F-201ENST00000308521 CDK10Q15131 360 aa10.01□□□□□ -0.81
APOBEC3F-201ENST00000308521 NKG7Q16617 165 aa10.01□□□□□ -0.81
APOBEC3F-201ENST00000308521 HIST2H2ACQ16777 129 aaPredicted RBP10.01□□□□□ -0.81
APOBEC3F-201ENST00000308521 SCIMPQ6UWF3 145 aa10.01□□□□□ -0.81
APOBEC3F-201ENST00000308521 ENPP6Q6UWR7 440 aa10.01□□□□□ -0.81
APOBEC3F-201ENST00000308521 EID3Q8N140 333 aa10.01□□□□□ -0.81
APOBEC3F-201ENST00000308521 ZCCHC7Q8N3Z6 543 aaKnown RBP10.01□□□□□ -0.81
APOBEC3F-201ENST00000308521 ZNF548Q8NEK5 533 aaPredicted RBP10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms