RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 EIF3HO15372 352 aaKnown RBP eCLIP25.22■■□□□ 1.63
CDKN2A-201ENST00000304494 PDGFAP04085 211 aa25.22■■□□□ 1.63
CDKN2A-201ENST00000304494 AP1S2P56377 157 aa25.22■■□□□ 1.63
CDKN2A-201ENST00000304494 KCNC4Q03721 635 aa25.22■■□□□ 1.63
CDKN2A-201ENST00000304494 GARNL3Q5VVW2 1013 aa25.22■■□□□ 1.63
CDKN2A-201ENST00000304494 AGTRAPQ6RW13 159 aa25.22■■□□□ 1.63
CDKN2A-201ENST00000304494 PPP1R32Q7Z5V6 425 aa25.22■■□□□ 1.63
CDKN2A-201ENST00000304494 ZC3HC1Q86WB0 502 aaKnown RBP25.22■■□□□ 1.63
CDKN2A-201ENST00000304494 MVB12AQ96EY5 273 aa25.22■■□□□ 1.63
CDKN2A-201ENST00000304494 C10orf90Q96M02 699 aa25.22■■□□□ 1.63
CDKN2A-201ENST00000304494 OLFM1Q99784 485 aa25.22■■□□□ 1.63
CDKN2A-201ENST00000304494 TMEM184CQ9NVA4 438 aa25.22■■□□□ 1.63
CDKN2A-201ENST00000304494 GPR83Q9NYM4 423 aa25.22■■□□□ 1.63
CDKN2A-201ENST00000304494 PSAT1Q9Y617 370 aa25.22■■□□□ 1.63
CDKN2A-201ENST00000304494 MAU2Q9Y6X3 613 aa25.22■■□□□ 1.63
CDKN2A-201ENST00000304494 HAT1O14929 419 aa25.21■■□□□ 1.63
CDKN2A-201ENST00000304494 PRPF4O43172 522 aaKnown RBP eCLIP25.21■■□□□ 1.63
CDKN2A-201ENST00000304494 ENO2P09104 434 aaPredicted RBP25.21■■□□□ 1.63
CDKN2A-201ENST00000304494 MMP11P24347 488 aa25.21■■□□□ 1.63
CDKN2A-201ENST00000304494 PHKG1Q16816 387 aa25.21■■□□□ 1.63
CDKN2A-201ENST00000304494 DCAF10Q5QP82 559 aa25.21■■□□□ 1.63
CDKN2A-201ENST00000304494 DUPD1Q68J44 220 aa25.21■■□□□ 1.63
CDKN2A-201ENST00000304494 HPS6Q86YV9 775 aa25.21■■□□□ 1.63
CDKN2A-201ENST00000304494 FDCSPQ8NFU4 85 aa25.21■■□□□ 1.63
CDKN2A-201ENST00000304494 PDLIM5Q96HC4 596 aaKnown RBP25.21■■□□□ 1.63
CDKN2A-201ENST00000304494 SPSB2Q99619 263 aa25.21■■□□□ 1.63
CDKN2A-201ENST00000304494 RAB17Q9H0T7 212 aa25.21■■□□□ 1.63
CDKN2A-201ENST00000304494 CUEDC1Q9NWM3 386 aaPredicted RBP25.21■■□□□ 1.63
CDKN2A-201ENST00000304494 ARL15Q9NXU5 204 aa25.21■■□□□ 1.63
CDKN2A-201ENST00000304494 CTSFQ9UBX1 484 aa25.21■■□□□ 1.63
CDKN2A-201ENST00000304494 CDC23Q9UJX2 597 aa25.21■■□□□ 1.63
CDKN2A-201ENST00000304494 RUVBL1Q9Y265 456 aaKnown RBP25.21■■□□□ 1.63
CDKN2A-201ENST00000304494 PCM1Q15154 2024 aa25.2■■□□□ 1.63
CDKN2A-201ENST00000304494 A6NL46 340 aa25.2■■□□□ 1.62
CDKN2A-201ENST00000304494 H7BY64 318 aa25.2■■□□□ 1.62
CDKN2A-201ENST00000304494 AGPSO00116 658 aa25.2■■□□□ 1.62
CDKN2A-201ENST00000304494 MED26O95402 600 aa25.2■■□□□ 1.62
CDKN2A-201ENST00000304494 FOXL2P58012 376 aa25.2■■□□□ 1.62
CDKN2A-201ENST00000304494 OCA2Q04671 838 aa25.2■■□□□ 1.62
CDKN2A-201ENST00000304494 MBOAT1Q6ZNC8 495 aa25.2■■□□□ 1.62
CDKN2A-201ENST00000304494 ATL1Q8WXF7 558 aa25.2■■□□□ 1.62
CDKN2A-201ENST00000304494 PRAP1Q96NZ9 151 aa25.2■■□□□ 1.62
CDKN2A-201ENST00000304494 ATG10Q9H0Y0 220 aa25.2■■□□□ 1.62
CDKN2A-201ENST00000304494 CLMPQ9H6B4 373 aa25.2■■□□□ 1.62
CDKN2A-201ENST00000304494 SAYSD1Q9NPB0 183 aa25.2■■□□□ 1.62
CDKN2A-201ENST00000304494 SEMA3GQ9NS98 782 aa25.2■■□□□ 1.62
CDKN2A-201ENST00000304494 ZNF282Q9UDV7 671 aaPredicted RBP25.2■■□□□ 1.62
CDKN2A-201ENST00000304494 FAM95CA0A1B0GW59 222 aa25.19■■□□□ 1.62
CDKN2A-201ENST00000304494 VSTM2BA6NLU5 285 aa25.19■■□□□ 1.62
CDKN2A-201ENST00000304494 KLHL41O60662 606 aa25.19■■□□□ 1.62
CDKN2A-201ENST00000304494 SAT1P21673 171 aa25.19■■□□□ 1.62
CDKN2A-201ENST00000304494 FBLP22087 321 aaKnown RBP25.19■■□□□ 1.62
CDKN2A-201ENST00000304494 RPS15AP62244 130 aaKnown RBP25.19■■□□□ 1.62
CDKN2A-201ENST00000304494 CAV1Q03135 178 aa25.19■■□□□ 1.62
CDKN2A-201ENST00000304494 NAE1Q13564 534 aa25.19■■□□□ 1.62
CDKN2A-201ENST00000304494 HKDC1Q2TB90 917 aa25.19■■□□□ 1.62
CDKN2A-201ENST00000304494 CAPN13Q6MZZ7 669 aaPredicted RBP25.19■■□□□ 1.62
CDKN2A-201ENST00000304494 CAPN12Q6ZSI9 719 aa25.19■■□□□ 1.62
CDKN2A-201ENST00000304494 C17orf64Q86WR6 236 aa25.19■■□□□ 1.62
CDKN2A-201ENST00000304494 NKAPQ8N5F7 415 aaKnown RBP25.19■■□□□ 1.62
CDKN2A-201ENST00000304494 CDKL2Q92772 493 aa25.19■■□□□ 1.62
CDKN2A-201ENST00000304494 VPS50Q96JG6 964 aa25.19■■□□□ 1.62
CDKN2A-201ENST00000304494 HAUS8Q9BT25 410 aa25.19■■□□□ 1.62
CDKN2A-201ENST00000304494 NUDT9Q9BW91 350 aa25.19■■□□□ 1.62
CDKN2A-201ENST00000304494 SGPP1Q9BX95 441 aa25.19■■□□□ 1.62
CDKN2A-201ENST00000304494 SOX17Q9H6I2 414 aaPredicted RBP25.19■■□□□ 1.62
CDKN2A-201ENST00000304494 GRHL1Q9NZI5 618 aa25.19■■□□□ 1.62
CDKN2A-201ENST00000304494 ZNF37AP17032 561 aaPredicted RBP25.18■■□□□ 1.62
CDKN2A-201ENST00000304494 PGGT1BP53609 377 aa25.18■■□□□ 1.62
CDKN2A-201ENST00000304494 CKAP4Q07065 602 aaKnown RBP25.18■■□□□ 1.62
CDKN2A-201ENST00000304494 NDUFA9Q16795 377 aa25.18■■□□□ 1.62
CDKN2A-201ENST00000304494 LCTLQ6UWM7 567 aa25.18■■□□□ 1.62
CDKN2A-201ENST00000304494 ZNF572Q7Z3I7 529 aaPredicted RBP25.18■■□□□ 1.62
CDKN2A-201ENST00000304494 DTWD1Q8N5C7 304 aa25.18■■□□□ 1.62
CDKN2A-201ENST00000304494 ANKRD7Q92527 254 aa25.18■■□□□ 1.62
CDKN2A-201ENST00000304494 ALKBH8Q96BT7 664 aaKnown RBP25.18■■□□□ 1.62
CDKN2A-201ENST00000304494 MIEF2Q96C03 454 aa25.18■■□□□ 1.62
CDKN2A-201ENST00000304494 THAP11Q96EK4 314 aa25.18■■□□□ 1.62
CDKN2A-201ENST00000304494 VPS39Q96JC1 886 aa25.18■■□□□ 1.62
CDKN2A-201ENST00000304494 PHACTR1Q9C0D0 580 aa25.18■■□□□ 1.62
CDKN2A-201ENST00000304494 RHOJQ9H4E5 214 aa25.18■■□□□ 1.62
CDKN2A-201ENST00000304494 SYNPO2LQ9H987 977 aa25.18■■□□□ 1.62
CDKN2A-201ENST00000304494 NOVA2Q9UNW9 492 aaKnown RBP25.18■■□□□ 1.62
CDKN2A-201ENST00000304494 TENM4Q6N022 2769 aa25.17■■□□□ 1.62
CDKN2A-201ENST00000304494 PCSK5Q92824 1860 aa25.17■■□□□ 1.62
CDKN2A-201ENST00000304494 KCNE1BA0A087WTH5 132 aa25.17■■□□□ 1.62
CDKN2A-201ENST00000304494 DPM1O60762 260 aa25.17■■□□□ 1.62
CDKN2A-201ENST00000304494 GRK3P35626 688 aa25.17■■□□□ 1.62
CDKN2A-201ENST00000304494 DSG2Q14126 1118 aa25.17■■□□□ 1.62
CDKN2A-201ENST00000304494 SHISA6Q6ZSJ9 500 aa25.17■■□□□ 1.62
CDKN2A-201ENST00000304494 PLD3Q8IV08 490 aa25.17■■□□□ 1.62
CDKN2A-201ENST00000304494 GALNT16Q8N428 558 aa25.17■■□□□ 1.62
CDKN2A-201ENST00000304494 STT3BQ8TCJ2 826 aa25.17■■□□□ 1.62
CDKN2A-201ENST00000304494 FBXL8Q96CD0 374 aa25.17■■□□□ 1.62
CDKN2A-201ENST00000304494 SMAD5Q99717 465 aaKnown RBP25.17■■□□□ 1.62
CDKN2A-201ENST00000304494 CRB3Q9BUF7 120 aa25.17■■□□□ 1.62
CDKN2A-201ENST00000304494 DRC3Q9H069 523 aa25.17■■□□□ 1.62
CDKN2A-201ENST00000304494 POPDC3Q9HBV1 291 aa25.17■■□□□ 1.62
CDKN2A-201ENST00000304494 ATP13A2Q9NQ11 1180 aa25.17■■□□□ 1.62
CDKN2A-201ENST00000304494 TXNDC16Q9P2K2 825 aa25.17■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms