RNA–Protein interactions for RNA: ENST00000303450.4

HOXC9-201, Transcript of homeobox C9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC9, Length 1,516 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-201ENST00000303450 EZRP15311 586 aaKnown RBP23.48■■□□□ 1.35
HOXC9-201ENST00000303450 PIK3CGP48736 1102 aa23.48■■□□□ 1.35
HOXC9-201ENST00000303450 PRKAA2P54646 552 aa23.48■■□□□ 1.35
HOXC9-201ENST00000303450 RAB15P59190 212 aa23.48■■□□□ 1.35
HOXC9-201ENST00000303450 HERVK_113P63132 956 aa23.48■■□□□ 1.35
HOXC9-201ENST00000303450 CSNK1G2P78368 415 aa23.48■■□□□ 1.35
HOXC9-201ENST00000303450 GTF2H2Q13888 395 aa23.48■■□□□ 1.35
HOXC9-201ENST00000303450 IL11RAQ14626 422 aa23.48■■□□□ 1.35
HOXC9-201ENST00000303450 GTF2H2CQ6P1K8 395 aa23.48■■□□□ 1.35
HOXC9-201ENST00000303450 NXPE4Q6UWF7 544 aa23.48■■□□□ 1.35
HOXC9-201ENST00000303450 PRR11Q96HE9 360 aaPredicted RBP23.48■■□□□ 1.35
HOXC9-201ENST00000303450 TAAR9Q96RI9 348 aa23.48■■□□□ 1.35
HOXC9-201ENST00000303450 ERVK-6Q9BXR3 956 aa23.48■■□□□ 1.35
HOXC9-201ENST00000303450 PELI2Q9HAT8 420 aa23.48■■□□□ 1.35
HOXC9-201ENST00000303450 COPG2Q9UBF2 871 aa23.48■■□□□ 1.35
HOXC9-201ENST00000303450 ANGPTL2Q9UKU9 493 aa23.48■■□□□ 1.35
HOXC9-201ENST00000303450 RARRES3Q9UL19 164 aa23.48■■□□□ 1.35
HOXC9-201ENST00000303450 PLCL2Q9UPR0 1127 aa23.48■■□□□ 1.35
HOXC9-201ENST00000303450 AK5Q9Y6K8 562 aa23.48■■□□□ 1.35
HOXC9-201ENST00000303450 A0A0J9YVX5 310 aa23.47■■□□□ 1.35
HOXC9-201ENST00000303450 MED19A0JLT2 244 aaPredicted RBP23.47■■□□□ 1.35
HOXC9-201ENST00000303450 TMEM150CB9EJG8 249 aa23.47■■□□□ 1.35
HOXC9-201ENST00000303450 E2F3O00716 465 aa23.47■■□□□ 1.35
HOXC9-201ENST00000303450 HAT1O14929 419 aa23.47■■□□□ 1.35
HOXC9-201ENST00000303450 RBMS1P29558 406 aaKnown RBP23.47■■□□□ 1.35
HOXC9-201ENST00000303450 DCAF12Q5T6F0 453 aa23.47■■□□□ 1.35
HOXC9-201ENST00000303450 TMEM164Q5U3C3 297 aa23.47■■□□□ 1.35
HOXC9-201ENST00000303450 FBXO42Q6P3S6 717 aa23.47■■□□□ 1.35
HOXC9-201ENST00000303450 RNF44Q7L0R7 432 aa23.47■■□□□ 1.35
HOXC9-201ENST00000303450 MCATQ8IVS2 390 aaKnown RBP23.47■■□□□ 1.35
HOXC9-201ENST00000303450 OR4K1Q8NGD4 311 aa23.47■■□□□ 1.35
HOXC9-201ENST00000303450 PPP4R1Q8TF05 950 aa23.47■■□□□ 1.35
HOXC9-201ENST00000303450 ZNF501Q96CX3 271 aaPredicted RBP23.47■■□□□ 1.35
HOXC9-201ENST00000303450 NXPE2Q96DL1 559 aa23.47■■□□□ 1.35
HOXC9-201ENST00000303450 CTRCQ99895 268 aa23.47■■□□□ 1.35
HOXC9-201ENST00000303450 SH3GL2Q99962 352 aa23.47■■□□□ 1.35
HOXC9-201ENST00000303450 ZFYVE21Q9BQ24 234 aa23.47■■□□□ 1.35
HOXC9-201ENST00000303450 APMAPQ9HDC9 416 aa23.47■■□□□ 1.35
HOXC9-201ENST00000303450 PRPF4O43172 522 aaKnown RBP eCLIP23.46■■□□□ 1.35
HOXC9-201ENST00000303450 HCRTR1O43613 425 aa23.46■■□□□ 1.35
HOXC9-201ENST00000303450 KATNA1O75449 491 aa23.46■■□□□ 1.35
HOXC9-201ENST00000303450 C1GALT1C1LP0DN25 315 aa23.46■■□□□ 1.35
HOXC9-201ENST00000303450 IMPDH1P20839 514 aa23.46■■□□□ 1.35
HOXC9-201ENST00000303450 GABRA4P48169 554 aa23.46■■□□□ 1.35
HOXC9-201ENST00000303450 SHC2P98077 582 aa23.46■■□□□ 1.35
HOXC9-201ENST00000303450 MEF2AQ02078 507 aaPredicted RBP23.46■■□□□ 1.35
HOXC9-201ENST00000303450 RELAQ04206 551 aa23.46■■□□□ 1.35
HOXC9-201ENST00000303450 RTP5Q14D33 572 aa23.46■■□□□ 1.35
HOXC9-201ENST00000303450 XKR6Q5GH73 641 aa23.46■■□□□ 1.35
HOXC9-201ENST00000303450 CEACAM20Q6UY09 585 aa23.46■■□□□ 1.35
HOXC9-201ENST00000303450 SLCO4C1Q6ZQN7 724 aa23.46■■□□□ 1.35
HOXC9-201ENST00000303450 GOLGA7Q7Z5G4 137 aa23.46■■□□□ 1.35
HOXC9-201ENST00000303450 BPHLQ86WA6 291 aaPredicted RBP23.46■■□□□ 1.35
HOXC9-201ENST00000303450 PPP1R3BQ86XI6 285 aa23.46■■□□□ 1.35
HOXC9-201ENST00000303450 PLD3Q8IV08 490 aa23.46■■□□□ 1.35
HOXC9-201ENST00000303450 LSMEM2Q8N112 164 aa23.46■■□□□ 1.35
HOXC9-201ENST00000303450 USP7Q93009 1102 aa23.46■■□□□ 1.35
HOXC9-201ENST00000303450 SLC46A1Q96NT5 459 aa23.46■■□□□ 1.35
HOXC9-201ENST00000303450 FCRL4Q96PJ5 515 aa23.46■■□□□ 1.35
HOXC9-201ENST00000303450 TMEM237Q96Q45 408 aa23.46■■□□□ 1.35
HOXC9-201ENST00000303450 C1QTNF3Q9BXJ4 246 aa23.46■■□□□ 1.35
HOXC9-201ENST00000303450 ASPSCR1Q9BZE9 553 aa23.46■■□□□ 1.35
HOXC9-201ENST00000303450 SERTAD3Q9UJW9 196 aa23.46■■□□□ 1.35
HOXC9-201ENST00000303450 PILRAQ9UKJ1 303 aa23.46■■□□□ 1.35
HOXC9-201ENST00000303450 PCTPQ9UKL6 214 aa23.46■■□□□ 1.35
HOXC9-201ENST00000303450 TM9SF1O15321 606 aa23.45■■□□□ 1.34
HOXC9-201ENST00000303450 H2AFYO75367 372 aaKnown RBP23.45■■□□□ 1.34
HOXC9-201ENST00000303450 RPS17P08708 135 aaKnown RBP23.45■■□□□ 1.34
HOXC9-201ENST00000303450 EPORP19235 508 aa23.45■■□□□ 1.34
HOXC9-201ENST00000303450 VARSP26640 1264 aaKnown RBP23.45■■□□□ 1.34
HOXC9-201ENST00000303450 IRF8Q02556 426 aa23.45■■□□□ 1.34
HOXC9-201ENST00000303450 CYP4F3Q08477 520 aa23.45■■□□□ 1.34
HOXC9-201ENST00000303450 ZNF678Q5SXM1 525 aa23.45■■□□□ 1.34
HOXC9-201ENST00000303450 ATG9BQ674R7 924 aa23.45■■□□□ 1.34
HOXC9-201ENST00000303450 TBC1D19Q8N5T2 526 aa23.45■■□□□ 1.34
HOXC9-201ENST00000303450 OR8K5Q8NH50 307 aa23.45■■□□□ 1.34
HOXC9-201ENST00000303450 ATP6V1G3Q96LB4 118 aa23.45■■□□□ 1.34
HOXC9-201ENST00000303450 SELENOSQ9BQE4 189 aa23.45■■□□□ 1.34
HOXC9-201ENST00000303450 AIF1LQ9BQI0 150 aa23.45■■□□□ 1.34
HOXC9-201ENST00000303450 DDA1Q9BW61 102 aa23.45■■□□□ 1.34
HOXC9-201ENST00000303450 EHD1Q9H4M9 534 aa23.45■■□□□ 1.34
HOXC9-201ENST00000303450 IPPKQ9H8X2 491 aa23.45■■□□□ 1.34
HOXC9-201ENST00000303450 OXSMQ9NWU1 459 aa23.45■■□□□ 1.34
HOXC9-201ENST00000303450 IRAK4Q9NWZ3 460 aa23.45■■□□□ 1.34
HOXC9-201ENST00000303450 MDC1Q14676 2089 aaKnown RBP23.45■■□□□ 1.34
HOXC9-201ENST00000303450 FEZF1A0PJY2 475 aa23.44■■□□□ 1.34
HOXC9-201ENST00000303450 SUPT7LO94864 414 aa23.44■■□□□ 1.34
HOXC9-201ENST00000303450 FGF5P12034 268 aa23.44■■□□□ 1.34
HOXC9-201ENST00000303450 CXCR2P25025 360 aa23.44■■□□□ 1.34
HOXC9-201ENST00000303450 ITGA1P56199 1179 aa23.44■■□□□ 1.34
HOXC9-201ENST00000303450 RPS15AP62244 130 aaKnown RBP23.44■■□□□ 1.34
HOXC9-201ENST00000303450 CHIT1Q13231 466 aa23.44■■□□□ 1.34
HOXC9-201ENST00000303450 OR1L3Q8NH93 324 aa23.44■■□□□ 1.34
HOXC9-201ENST00000303450 PMEPA1Q969W9 287 aa23.44■■□□□ 1.34
HOXC9-201ENST00000303450 ATP6V1E2Q96A05 226 aa23.44■■□□□ 1.34
HOXC9-201ENST00000303450 L3HYPDHQ96EM0 354 aa23.44■■□□□ 1.34
HOXC9-201ENST00000303450 ZPBPQ9BS86 351 aa23.44■■□□□ 1.34
HOXC9-201ENST00000303450 NOL11Q9H8H0 719 aaKnown RBP23.44■■□□□ 1.34
HOXC9-201ENST00000303450 NCOR2Q9Y618 2525 aa23.44■■□□□ 1.34
HOXC9-201ENST00000303450 SPTBP11277 2137 aa23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms