RNA–Protein interactions for RNA: ENST00000302278.7

ITGB1-201, Transcript of integrin subunit beta 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ITGB1, Length 3,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-201ENST00000302278 RAD51AP1Q96B01 352 aa6.1□□□□□ -1.43
ITGB1-201ENST00000302278 CALR3Q96L12 384 aaKnown RBP6.1□□□□□ -1.43
ITGB1-201ENST00000302278 UTP23Q9BRU9 249 aaKnown RBP6.1□□□□□ -1.43
ITGB1-201ENST00000302278 LRRC40Q9H9A6 602 aa6.1□□□□□ -1.43
ITGB1-201ENST00000302278 COQ3Q9NZJ6 369 aa6.1□□□□□ -1.43
ITGB1-201ENST00000302278 RNF6Q9Y252 685 aa6.1□□□□□ -1.43
ITGB1-201ENST00000302278 TDRKHQ9Y2W6 561 aaKnown RBP6.1□□□□□ -1.43
ITGB1-201ENST00000302278 ANK2Q01484 3957 aa6.1□□□□□ -1.43
ITGB1-201ENST00000302278 H0YGG7 62 aa6.1□□□□□ -1.43
ITGB1-201ENST00000302278 PSMD3O43242 534 aa6.1□□□□□ -1.43
ITGB1-201ENST00000302278 PROM1O43490 865 aa6.1□□□□□ -1.43
ITGB1-201ENST00000302278 ATE1O95260 518 aa6.1□□□□□ -1.43
ITGB1-201ENST00000302278 HEXAP06865 529 aa6.1□□□□□ -1.43
ITGB1-201ENST00000302278 RBL1P28749 1068 aa6.1□□□□□ -1.43
ITGB1-201ENST00000302278 EEF1DP29692 281 aaKnown RBP6.1□□□□□ -1.43
ITGB1-201ENST00000302278 ADARP55265 1226 aaKnown RBP6.1□□□□□ -1.43
ITGB1-201ENST00000302278 ARF3P61204 181 aaPredicted RBP6.1□□□□□ -1.43
ITGB1-201ENST00000302278 ZNF33BQ06732 778 aa6.1□□□□□ -1.43
ITGB1-201ENST00000302278 MESDQ14696 234 aa6.1□□□□□ -1.43
ITGB1-201ENST00000302278 EMC4Q5J8M3 183 aa6.1□□□□□ -1.43
ITGB1-201ENST00000302278 AFTPHQ6ULP2 937 aa6.1□□□□□ -1.43
ITGB1-201ENST00000302278 PAMR1Q6UXH9 720 aa6.1□□□□□ -1.43
ITGB1-201ENST00000302278 GPALPP1Q8IXQ4 340 aa6.1□□□□□ -1.43
ITGB1-201ENST00000302278 RNF25Q96BH1 459 aaPredicted RBP6.1□□□□□ -1.43
ITGB1-201ENST00000302278 THAP11Q96EK4 314 aa6.1□□□□□ -1.43
ITGB1-201ENST00000302278 OR1F2PQ96R84 312 aa6.1□□□□□ -1.43
ITGB1-201ENST00000302278 CYTH2Q99418 400 aa6.1□□□□□ -1.43
ITGB1-201ENST00000302278 EDARQ9UNE0 448 aa6.1□□□□□ -1.43
ITGB1-201ENST00000302278 KLHL20Q9Y2M5 609 aa6.1□□□□□ -1.43
ITGB1-201ENST00000302278 PCDHGB3Q9Y5G1 929 aa6.1□□□□□ -1.43
ITGB1-201ENST00000302278 OR14I1A6ND48 311 aa6.09□□□□□ -1.43
ITGB1-201ENST00000302278 KPNA5O15131 536 aa6.09□□□□□ -1.43
ITGB1-201ENST00000302278 HSD17B2P37059 387 aa6.09□□□□□ -1.43
ITGB1-201ENST00000302278 MEF2AQ02078 507 aaPredicted RBP6.09□□□□□ -1.43
ITGB1-201ENST00000302278 HYAL4Q2M3T9 481 aa6.09□□□□□ -1.43
ITGB1-201ENST00000302278 PARP6Q2NL67 630 aa6.09□□□□□ -1.43
ITGB1-201ENST00000302278 SYTL3Q4VX76 610 aa6.09□□□□□ -1.43
ITGB1-201ENST00000302278 ZNF534Q76KX8 674 aa6.09□□□□□ -1.43
ITGB1-201ENST00000302278 MPP5Q8N3R9 675 aa6.09□□□□□ -1.43
ITGB1-201ENST00000302278 LKAAEAR1Q8TD35 194 aa6.09□□□□□ -1.43
ITGB1-201ENST00000302278 FAM8A1Q9UBU6 413 aa6.09□□□□□ -1.43
ITGB1-201ENST00000302278 GNPTGQ9UJJ9 305 aa6.09□□□□□ -1.43
ITGB1-201ENST00000302278 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.09□□□□□ -1.432e-8■□□□□ 10.9
ITGB1-201ENST00000302278 FEZF1A0PJY2 475 aa6.09□□□□□ -1.43
ITGB1-201ENST00000302278 FAM171A2A8MVW0 826 aa6.09□□□□□ -1.43
ITGB1-201ENST00000302278 CCNDBP1O95273 360 aa6.09□□□□□ -1.43
ITGB1-201ENST00000302278 IGHG3P01860 377 aa6.09□□□□□ -1.43
ITGB1-201ENST00000302278 PKMP14618 531 aaKnown RBP6.09□□□□□ -1.43
ITGB1-201ENST00000302278 COMTP21964 271 aa6.09□□□□□ -1.43
ITGB1-201ENST00000302278 TPP2P29144 1249 aaPredicted RBP6.09□□□□□ -1.43
ITGB1-201ENST00000302278 CMPK1P30085 196 aa6.09□□□□□ -1.43
ITGB1-201ENST00000302278 ABATP80404 500 aa6.09□□□□□ -1.43
ITGB1-201ENST00000302278 SF1Q15637 639 aaKnown RBP6.09□□□□□ -1.43
ITGB1-201ENST00000302278 BBS9Q3SYG4 887 aa6.09□□□□□ -1.43
ITGB1-201ENST00000302278 CMPK2Q5EBM0 449 aa6.09□□□□□ -1.43
ITGB1-201ENST00000302278 NCCRP1Q6ZVX7 275 aaPredicted RBP6.09□□□□□ -1.43
ITGB1-201ENST00000302278 AFAP1L2Q8N4X5 818 aa6.09□□□□□ -1.43
ITGB1-201ENST00000302278 MAGEC3Q8TD91 643 aa6.09□□□□□ -1.43
ITGB1-201ENST00000302278 SDCCAG3Q96C92 435 aa6.09□□□□□ -1.43
ITGB1-201ENST00000302278 LRRC45Q96CN5 670 aa6.09□□□□□ -1.43
ITGB1-201ENST00000302278 MRFAP1L1Q96HT8 127 aa6.09□□□□□ -1.43
ITGB1-201ENST00000302278 FAM129AQ9BZQ8 928 aa6.09□□□□□ -1.43
ITGB1-201ENST00000302278 DRC3Q9H069 523 aa6.09□□□□□ -1.43
ITGB1-201ENST00000302278 ZDHHC11Q9H8X9 412 aa6.09□□□□□ -1.43
ITGB1-201ENST00000302278 RASSF1Q9NS23 344 aa6.09□□□□□ -1.43
ITGB1-201ENST00000302278 LANCL2Q9NS86 450 aa6.09□□□□□ -1.43
ITGB1-201ENST00000302278 IRAK4Q9NWZ3 460 aa6.09□□□□□ -1.43
ITGB1-201ENST00000302278 SMARCAL1Q9NZC9 954 aa6.09□□□□□ -1.43
ITGB1-201ENST00000302278 PJA2O43164 708 aa6.08□□□□□ -1.44
ITGB1-201ENST00000302278 PSIP1O75475 530 aaKnown RBP6.08□□□□□ -1.44
ITGB1-201ENST00000302278 ABOP16442 354 aa6.08□□□□□ -1.44
ITGB1-201ENST00000302278 HRH2P25021 359 aa6.08□□□□□ -1.44
ITGB1-201ENST00000302278 MSNP26038 577 aaKnown RBP6.08□□□□□ -1.44
ITGB1-201ENST00000302278 HOXC12P31275 282 aa6.08□□□□□ -1.44
ITGB1-201ENST00000302278 HLCSP50747 726 aa6.08□□□□□ -1.44
ITGB1-201ENST00000302278 MLF1P58340 268 aa6.08□□□□□ -1.44
ITGB1-201ENST00000302278 DYNLT1P63172 113 aa6.08□□□□□ -1.44
ITGB1-201ENST00000302278 USP10Q14694 798 aaKnown RBP6.08□□□□□ -1.44
ITGB1-201ENST00000302278 SLC25A35Q3KQZ1 300 aa6.08□□□□□ -1.44
ITGB1-201ENST00000302278 TMEM214Q6NUQ4 689 aaKnown RBP6.08□□□□□ -1.44
ITGB1-201ENST00000302278 RAB42Q8N4Z0 105 aa6.08□□□□□ -1.44
ITGB1-201ENST00000302278 CSNK1A1LQ8N752 337 aa6.08□□□□□ -1.44
ITGB1-201ENST00000302278 HES7Q9BYE0 225 aa6.08□□□□□ -1.44
ITGB1-201ENST00000302278 GSX1Q9H4S2 264 aaPredicted RBP6.08□□□□□ -1.44
ITGB1-201ENST00000302278 CLK4Q9HAZ1 481 aaKnown RBP6.08□□□□□ -1.44
ITGB1-201ENST00000302278 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.08□□□□□ -1.44
ITGB1-201ENST00000302278 GTF3C1Q12789 2109 aa6.08□□□□□ -1.44
ITGB1-201ENST00000302278 CCDC162PA2VCL2 907 aa6.08□□□□□ -1.44
ITGB1-201ENST00000302278 ERI2A8K979 691 aaKnown RBP6.08□□□□□ -1.44
ITGB1-201ENST00000302278 MAGEB17A8MXT2 336 aa6.08□□□□□ -1.44
ITGB1-201ENST00000302278 NRP2O60462 931 aa6.08□□□□□ -1.44
ITGB1-201ENST00000302278 DIAPH2O60879 1101 aa6.08□□□□□ -1.44
ITGB1-201ENST00000302278 ZNF24P17028 368 aa6.08□□□□□ -1.44
ITGB1-201ENST00000302278 PTGER1P34995 402 aa6.08□□□□□ -1.44
ITGB1-201ENST00000302278 ANP32AP39687 249 aaKnown RBP6.08□□□□□ -1.44
ITGB1-201ENST00000302278 SKIV2L2P42285 1042 aaKnown RBP6.08□□□□□ -1.44
ITGB1-201ENST00000302278 YBX1P67809 324 aaKnown RBP6.08□□□□□ -1.44
ITGB1-201ENST00000302278 TERF2Q15554 542 aa6.08□□□□□ -1.44
ITGB1-201ENST00000302278 RGS9BPQ6ZS82 235 aa6.08□□□□□ -1.44
ITGB1-201ENST00000302278 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms