RNA–Protein interactions for RNA: ENST00000290037.10

SEC16A-202, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEC16A, Length 8,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-202ENST00000290037 FAM136AQ96C01 138 aa14.39□□□□□ -0.11
SEC16A-202ENST00000290037 C7orf50Q9BRJ6 194 aaKnown RBP14.39□□□□□ -0.11
SEC16A-202ENST00000290037 CLIC1O00299 241 aa14.39□□□□□ -0.11
SEC16A-202ENST00000290037 ERAL1O75616 437 aaKnown RBP14.39□□□□□ -0.11
SEC16A-202ENST00000290037 RPS3P23396 243 aaKnown RBP eCLIP14.39□□□□□ -0.112e-7■■□□□ 13.2
SEC16A-202ENST00000290037 BHLHE41Q9C0J9 482 aaPredicted RBP14.39□□□□□ -0.11
SEC16A-202ENST00000290037 CARD8Q9Y2G2 431 aa14.39□□□□□ -0.11
SEC16A-202ENST00000290037 MTHFD1P11586 935 aaKnown RBP14.39□□□□□ -0.11
SEC16A-202ENST00000290037 HSD17B1P14061 328 aa14.39□□□□□ -0.11
SEC16A-202ENST00000290037 CRADDP78560 199 aa14.39□□□□□ -0.11
SEC16A-202ENST00000290037 PDE4DIPQ5VU43 2346 aa14.39□□□□□ -0.11
SEC16A-202ENST00000290037 TRPM3Q9HCF6 1732 aaPredicted RBP14.39□□□□□ -0.11
SEC16A-202ENST00000290037 PPP1R11O60927 126 aaPredicted RBP14.39□□□□□ -0.11
SEC16A-202ENST00000290037 ATP1B2P14415 290 aaPredicted RBP14.39□□□□□ -0.11
SEC16A-202ENST00000290037 NPY5RQ15761 445 aa14.39□□□□□ -0.11
SEC16A-202ENST00000290037 CNOT6Q9ULM6 557 aaKnown RBP14.39□□□□□ -0.11
SEC16A-202ENST00000290037 A0A0U1RQF3 1178 aa14.39□□□□□ -0.11
SEC16A-202ENST00000290037 GLTPD2A6NH11 291 aa14.39□□□□□ -0.11
SEC16A-202ENST00000290037 TSPAN6O43657 245 aa14.39□□□□□ -0.11
SEC16A-202ENST00000290037 PRAMEF11O60813 436 aa14.39□□□□□ -0.11
SEC16A-202ENST00000290037 PTTG1O95997 202 aa14.39□□□□□ -0.11
SEC16A-202ENST00000290037 MT-CO1P00395 513 aa14.39□□□□□ -0.11
SEC16A-202ENST00000290037 PGAP3Q96FM1 320 aaPredicted RBP14.39□□□□□ -0.11
SEC16A-202ENST00000290037 SRMSQ9H3Y6 488 aa14.39□□□□□ -0.11
SEC16A-202ENST00000290037 CAPN10Q9HC96 672 aa14.39□□□□□ -0.11
SEC16A-202ENST00000290037 SOX11P35716 441 aa14.39□□□□□ -0.11
SEC16A-202ENST00000290037 KLHDC10Q6PID8 442 aa14.39□□□□□ -0.11
SEC16A-202ENST00000290037 FAM86B1Q8N7N1 296 aa14.39□□□□□ -0.11
SEC16A-202ENST00000290037 MCMBPQ9BTE3 642 aa14.39□□□□□ -0.11
SEC16A-202ENST00000290037 TOR4AQ9NXH8 423 aa14.39□□□□□ -0.11
SEC16A-202ENST00000290037 NKIRAS2Q9NYR9 191 aa14.39□□□□□ -0.11
SEC16A-202ENST00000290037 LOC100130705A0A1B0GUX0 176 aa14.39□□□□□ -0.11
SEC16A-202ENST00000290037 A0A1W2PRB8 838 aa14.39□□□□□ -0.11
SEC16A-202ENST00000290037 PPEF2O14830 753 aa14.39□□□□□ -0.11
SEC16A-202ENST00000290037 RHCEP18577 417 aa14.39□□□□□ -0.11
SEC16A-202ENST00000290037 SHMT2P34897 504 aa14.39□□□□□ -0.11
SEC16A-202ENST00000290037 DECR1Q16698 335 aa14.39□□□□□ -0.11
SEC16A-202ENST00000290037 ZNF404Q494X3 552 aa14.39□□□□□ -0.11
SEC16A-202ENST00000290037 Q9N2J8 555 aa14.39□□□□□ -0.11
SEC16A-202ENST00000290037 WASF2Q9Y6W5 498 aa14.39□□□□□ -0.11
SEC16A-202ENST00000290037 DNM1LO00429 736 aa14.38□□□□□ -0.11
SEC16A-202ENST00000290037 SCAMP3O14828 347 aaKnown RBP14.38□□□□□ -0.11
SEC16A-202ENST00000290037 CNTN5O94779 1100 aa14.38□□□□□ -0.11
SEC16A-202ENST00000290037 CYP17A1P05093 508 aa14.38□□□□□ -0.11
SEC16A-202ENST00000290037 KHDC1Q4VXA5 237 aaKnown RBP14.38□□□□□ -0.11
SEC16A-202ENST00000290037 EOGTQ5NDL2 527 aa14.38□□□□□ -0.11
SEC16A-202ENST00000290037 SLC7A13Q8TCU3 470 aa14.38□□□□□ -0.11
SEC16A-202ENST00000290037 TBATAQ96M53 351 aa14.38□□□□□ -0.11
SEC16A-202ENST00000290037 ZNF717Q9BY31 904 aaPredicted RBP14.38□□□□□ -0.11
SEC16A-202ENST00000290037 POTEKPQ9BYX7 375 aa14.38□□□□□ -0.11
SEC16A-202ENST00000290037 OR2AG1Q9H205 316 aa14.38□□□□□ -0.11
SEC16A-202ENST00000290037 NELFAQ9H3P2 528 aa14.38□□□□□ -0.11
SEC16A-202ENST00000290037 KLHL21Q9UJP4 597 aa14.38□□□□□ -0.11
SEC16A-202ENST00000290037 ECHS1P30084 290 aa14.38□□□□□ -0.11
SEC16A-202ENST00000290037 KLF1Q13351 362 aaPredicted RBP14.38□□□□□ -0.11
SEC16A-202ENST00000290037 OR10A6Q8NH74 314 aa14.38□□□□□ -0.11
SEC16A-202ENST00000290037 ARHGAP39Q9C0H5 1083 aa14.38□□□□□ -0.11
SEC16A-202ENST00000290037 WDR26Q9H7D7 661 aa14.38□□□□□ -0.11
SEC16A-202ENST00000290037 PHIPQ8WWQ0 1821 aa14.38□□□□□ -0.11
SEC16A-202ENST00000290037 SCDO00767 359 aa14.38□□□□□ -0.11
SEC16A-202ENST00000290037 MYCP01106 439 aaPredicted RBP14.38□□□□□ -0.11
SEC16A-202ENST00000290037 AQP4P55087 323 aa14.38□□□□□ -0.11
SEC16A-202ENST00000290037 TAS2R39P59534 338 aa14.38□□□□□ -0.11
SEC16A-202ENST00000290037 COLEC12Q5KU26 742 aa14.38□□□□□ -0.11
SEC16A-202ENST00000290037 NCBP2-AS2Q69YL0 99 aa14.38□□□□□ -0.11
SEC16A-202ENST00000290037 NPAS3Q8IXF0 933 aa14.38□□□□□ -0.11
SEC16A-202ENST00000290037 TSSK3Q96PN8 268 aa14.38□□□□□ -0.11
SEC16A-202ENST00000290037 NAP1L6A6NFF2 107 aa14.38□□□□□ -0.11
SEC16A-202ENST00000290037 GKN3PP0CG01 181 aa14.38□□□□□ -0.11
SEC16A-202ENST00000290037 CD40LGP29965 261 aa14.38□□□□□ -0.11
SEC16A-202ENST00000290037 PRKAG1P54619 331 aa14.38□□□□□ -0.11
SEC16A-202ENST00000290037 GLIS3Q8NEA6 775 aa14.38□□□□□ -0.11
SEC16A-202ENST00000290037 CDKN2AIPNLQ96HQ2 116 aa14.38□□□□□ -0.11
SEC16A-202ENST00000290037 SLC35A5Q9BS91 424 aa14.38□□□□□ -0.11
SEC16A-202ENST00000290037 FOLH1BQ9HBA9 442 aa14.38□□□□□ -0.11
SEC16A-202ENST00000290037 CPNE5Q9HCH3 593 aa14.38□□□□□ -0.11
SEC16A-202ENST00000290037 INPP5EQ9NRR6 644 aa14.38□□□□□ -0.11
SEC16A-202ENST00000290037 INSL6Q9Y581 213 aa14.38□□□□□ -0.11
SEC16A-202ENST00000290037 DCLK1O15075 740 aa14.38□□□□□ -0.11
SEC16A-202ENST00000290037 DCDC5Q6ZRR9 648 aa14.38□□□□□ -0.11
SEC16A-202ENST00000290037 C19orf43Q9BQ61 176 aa14.38□□□□□ -0.11
SEC16A-202ENST00000290037 ELOVL2Q9NXB9 296 aa14.38□□□□□ -0.11
SEC16A-202ENST00000290037 EGFL7Q9UHF1 273 aa14.38□□□□□ -0.11
SEC16A-202ENST00000290037 DISC1C4P0D8 188 aa14.38□□□□□ -0.11
SEC16A-202ENST00000290037 C9J4A7 227 aa14.38□□□□□ -0.11
SEC16A-202ENST00000290037 NMBRP28336 390 aa14.38□□□□□ -0.11
SEC16A-202ENST00000290037 CSTF2P33240 577 aaKnown RBP eCLIP14.38□□□□□ -0.11
SEC16A-202ENST00000290037 MEF2AQ02078 507 aaPredicted RBP14.38□□□□□ -0.11
SEC16A-202ENST00000290037 SLC8B1Q6J4K2 584 aa14.38□□□□□ -0.11
SEC16A-202ENST00000290037 C6orf89Q6UWU4 347 aa14.38□□□□□ -0.11
SEC16A-202ENST00000290037 AMIGO2Q86SJ2 522 aa14.38□□□□□ -0.11
SEC16A-202ENST00000290037 MS4A15Q8N5U1 240 aa14.38□□□□□ -0.11
SEC16A-202ENST00000290037 CD244Q9BZW8 370 aa14.38□□□□□ -0.11
SEC16A-202ENST00000290037 FAM172BPA6NC97 362 aa14.38□□□□□ -0.11
SEC16A-202ENST00000290037 A8MT66 165 aa14.38□□□□□ -0.11
SEC16A-202ENST00000290037 TLR4O00206 839 aa14.38□□□□□ -0.11
SEC16A-202ENST00000290037 MMP20O60882 483 aa14.38□□□□□ -0.11
SEC16A-202ENST00000290037 ENDOD1O94919 500 aa14.38□□□□□ -0.11
SEC16A-202ENST00000290037 GNAO1P09471 354 aa14.38□□□□□ -0.11
SEC16A-202ENST00000290037 EGFLAMQ63HQ2 1017 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms