RNA–Protein interactions for RNA: ENST00000287008.7

PCDH1-201, Transcript of protocadherin 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene PCDH1, Length 4,793 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-201ENST00000287008 EEFSECP57772 596 aaKnown RBP18.02■□□□□ 0.47
PCDH1-201ENST00000287008 GPX6P59796 221 aa18.02■□□□□ 0.47
PCDH1-201ENST00000287008 SNTA1Q13424 505 aa18.02■□□□□ 0.47
PCDH1-201ENST00000287008 KCNC3Q14003 757 aa18.02■□□□□ 0.47
PCDH1-201ENST00000287008 ZDHHC14Q8IZN3 488 aa18.02■□□□□ 0.47
PCDH1-201ENST00000287008 KBTBD7Q8WVZ9 684 aa18.02■□□□□ 0.47
PCDH1-201ENST00000287008 KLHL6Q8WZ60 621 aa18.02■□□□□ 0.47
PCDH1-201ENST00000287008 AK5Q9Y6K8 562 aa18.02■□□□□ 0.47
PCDH1-201ENST00000287008 C2orf74A8MZ97 194 aa18.01■□□□□ 0.47
PCDH1-201ENST00000287008 VEGFDO43915 354 aa18.01■□□□□ 0.47
PCDH1-201ENST00000287008 MCUBQ9NWR8 336 aa18.01■□□□□ 0.47
PCDH1-201ENST00000287008 KLRF1Q9NZS2 232 aa18.01■□□□□ 0.47
PCDH1-201ENST00000287008 H0YGN5 161 aa18.01■□□□□ 0.47
PCDH1-201ENST00000287008 H7BY64 318 aa18.01■□□□□ 0.47
PCDH1-201ENST00000287008 AGPSO00116 658 aa18.01■□□□□ 0.47
PCDH1-201ENST00000287008 NADKO95544 446 aaPredicted RBP18.01■□□□□ 0.47
PCDH1-201ENST00000287008 CDH1P12830 882 aa18.01■□□□□ 0.47
PCDH1-201ENST00000287008 GGT5P36269 586 aa18.01■□□□□ 0.47
PCDH1-201ENST00000287008 RPS13P62277 151 aaKnown RBP18.01■□□□□ 0.47
PCDH1-201ENST00000287008 SCAPQ12770 1279 aa18.01■□□□□ 0.47
PCDH1-201ENST00000287008 FOXJ1Q92949 421 aa18.01■□□□□ 0.47
PCDH1-201ENST00000287008 PRAP1Q96NZ9 151 aa18.01■□□□□ 0.47
PCDH1-201ENST00000287008 TRIM2Q9C040 744 aa18.01■□□□□ 0.47
PCDH1-201ENST00000287008 PLAGL1Q9UM63 463 aa18.01■□□□□ 0.47
PCDH1-201ENST00000287008 M0QZQ0 153 aa18.01■□□□□ 0.47
PCDH1-201ENST00000287008 SLC30A4O14863 429 aa18.01■□□□□ 0.47
PCDH1-201ENST00000287008 RENP00797 406 aa18.01■□□□□ 0.47
PCDH1-201ENST00000287008 IFNA6P05013 189 aa18.01■□□□□ 0.47
PCDH1-201ENST00000287008 ENGP17813 658 aa18.01■□□□□ 0.47
PCDH1-201ENST00000287008 DGKQP52824 942 aa18.01■□□□□ 0.47
PCDH1-201ENST00000287008 ZNF846Q147U1 533 aa18.01■□□□□ 0.47
PCDH1-201ENST00000287008 CST6Q15828 149 aa18.01■□□□□ 0.47
PCDH1-201ENST00000287008 TMEM44Q2T9K0 475 aa18.01■□□□□ 0.47
PCDH1-201ENST00000287008 CRB2Q5IJ48 1285 aa18.01■□□□□ 0.47
PCDH1-201ENST00000287008 CLLU1OSQ5K130 101 aa18.01■□□□□ 0.47
PCDH1-201ENST00000287008 C10orf62Q5T681 223 aaPredicted RBP18.01■□□□□ 0.47
PCDH1-201ENST00000287008 WDTC1Q8N5D0 677 aa18.01■□□□□ 0.47
PCDH1-201ENST00000287008 OR6K6Q8NGW6 343 aa18.01■□□□□ 0.47
PCDH1-201ENST00000287008 TMEM125Q96AQ2 219 aa18.01■□□□□ 0.47
PCDH1-201ENST00000287008 ARMC5Q96C12 935 aa18.01■□□□□ 0.47
PCDH1-201ENST00000287008 SPATA9Q9BWV2 254 aa18.01■□□□□ 0.47
PCDH1-201ENST00000287008 TTC34A8MYJ7 566 aa18■□□□□ 0.47
PCDH1-201ENST00000287008 AKAP8O43823 692 aaKnown RBP18■□□□□ 0.47
PCDH1-201ENST00000287008 IDH3BO43837 385 aa18■□□□□ 0.47
PCDH1-201ENST00000287008 JUNDP17535 347 aa18■□□□□ 0.47
PCDH1-201ENST00000287008 PROZP22891 400 aa18■□□□□ 0.47
PCDH1-201ENST00000287008 DENND5AQ6IQ26 1287 aa18■□□□□ 0.47
PCDH1-201ENST00000287008 NIPAL1Q6NVV3 410 aa18■□□□□ 0.47
PCDH1-201ENST00000287008 LAPTM4BQ86VI4 370 aa18■□□□□ 0.47
PCDH1-201ENST00000287008 TMEM25Q86YD3 366 aa18■□□□□ 0.47
PCDH1-201ENST00000287008 KCNH6Q9H252 994 aa18■□□□□ 0.47
PCDH1-201ENST00000287008 ADAM7Q9H2U9 754 aa18■□□□□ 0.47
PCDH1-201ENST00000287008 TAS2R1Q9NYW7 299 aa18■□□□□ 0.47
PCDH1-201ENST00000287008 DNAJB9Q9UBS3 223 aa18■□□□□ 0.47
PCDH1-201ENST00000287008 POMPQ9Y244 141 aa18■□□□□ 0.47
PCDH1-201ENST00000287008 H3BQ06 376 aaPredicted RBP18■□□□□ 0.47
PCDH1-201ENST00000287008 P4HA3Q7Z4N8 544 aa18■□□□□ 0.47
PCDH1-201ENST00000287008 ADGRD2Q7Z7M1 963 aa18■□□□□ 0.47
PCDH1-201ENST00000287008 POC5Q8NA72 575 aa18■□□□□ 0.47
PCDH1-201ENST00000287008 OR8D2Q9GZM6 311 aa18■□□□□ 0.47
PCDH1-201ENST00000287008 FANCFQ9NPI8 374 aa18■□□□□ 0.47
PCDH1-201ENST00000287008 TVP23BQ9NYZ1 205 aa18■□□□□ 0.47
PCDH1-201ENST00000287008 APOBEC3BQ9UH17 382 aaKnown RBP18■□□□□ 0.47
PCDH1-201ENST00000287008 BAZ2AQ9UIF9 1905 aaKnown RBP18■□□□□ 0.47
PCDH1-201ENST00000287008 PSMD11O00231 422 aa18■□□□□ 0.47
PCDH1-201ENST00000287008 ACADLP28330 430 aa18■□□□□ 0.47
PCDH1-201ENST00000287008 OXTRP30559 389 aa18■□□□□ 0.47
PCDH1-201ENST00000287008 PPP3R1P63098 170 aa18■□□□□ 0.47
PCDH1-201ENST00000287008 OR2AJ1Q8NGZ0 328 aa18■□□□□ 0.47
PCDH1-201ENST00000287008 CD244Q9BZW8 370 aa18■□□□□ 0.47
PCDH1-201ENST00000287008 DENND2DQ9H6A0 471 aaPredicted RBP18■□□□□ 0.47
PCDH1-201ENST00000287008 KLHL33A6NCF5 533 aa18■□□□□ 0.47
PCDH1-201ENST00000287008 PPP2R2BQ00005 443 aa18■□□□□ 0.47
PCDH1-201ENST00000287008 CAMK1Q14012 370 aa18■□□□□ 0.47
PCDH1-201ENST00000287008 HERC3Q15034 1050 aa18■□□□□ 0.47
PCDH1-201ENST00000287008 C12orf40Q86WS4 652 aa18■□□□□ 0.47
PCDH1-201ENST00000287008 SLC39A11Q8N1S5 342 aa18■□□□□ 0.47
PCDH1-201ENST00000287008 OR56A1Q8NGH5 318 aa18■□□□□ 0.47
PCDH1-201ENST00000287008 PSMA8Q8TAA3 256 aa18■□□□□ 0.47
PCDH1-201ENST00000287008 TOX2Q96NM4 488 aa18■□□□□ 0.47
PCDH1-201ENST00000287008 FIZ1Q96SL8 496 aa18■□□□□ 0.47
PCDH1-201ENST00000287008 EPYCQ99645 322 aa18■□□□□ 0.47
PCDH1-201ENST00000287008 XKR8Q9H6D3 395 aa18■□□□□ 0.47
PCDH1-201ENST00000287008 POPDC3Q9HBV1 291 aa18■□□□□ 0.47
PCDH1-201ENST00000287008 C11orf16Q9NQ32 467 aa18■□□□□ 0.47
PCDH1-201ENST00000287008 RSL24D1Q9UHA3 163 aaKnown RBP18■□□□□ 0.47
PCDH1-201ENST00000287008 DLGAP4Q9Y2H0 992 aa18■□□□□ 0.47
PCDH1-201ENST00000287008 HMGN1P05114 100 aa17.99■□□□□ 0.47
PCDH1-201ENST00000287008 C5AR1P21730 350 aa17.99■□□□□ 0.47
PCDH1-201ENST00000287008 MCFD2Q8NI22 146 aa17.99■□□□□ 0.47
PCDH1-201ENST00000287008 TP53INP1Q96A56 240 aa17.99■□□□□ 0.47
PCDH1-201ENST00000287008 SLC35C2Q9NQQ7 365 aa17.99■□□□□ 0.47
PCDH1-201ENST00000287008 FAM120CQ9NX05 1096 aaKnown RBP17.99■□□□□ 0.47
PCDH1-201ENST00000287008 EPCAMP16422 314 aa17.99■□□□□ 0.47
PCDH1-201ENST00000287008 TCEAL1Q15170 157 aa17.99■□□□□ 0.47
PCDH1-201ENST00000287008 LRTOMTQ8WZ04 291 aa17.99■□□□□ 0.47
PCDH1-201ENST00000287008 NELL2Q99435 816 aa17.99■□□□□ 0.47
PCDH1-201ENST00000287008 RNF11Q9Y3C5 154 aa17.99■□□□□ 0.47
PCDH1-201ENST00000287008 AHDC1Q5TGY3 1603 aaPredicted RBP17.99■□□□□ 0.47
PCDH1-201ENST00000287008 ITM2AO43736 263 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms