RNA–Protein interactions for RNA: ENST00000271628.8

SF3B4-201, Transcript of splicing factor 3b subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B4, Length 2,085 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B4-201ENST00000271628 ZNF839A8K0R7 811 aa14.79□□□□□ -0.04
SF3B4-201ENST00000271628 PRMT3O60678 531 aa14.79□□□□□ -0.04
SF3B4-201ENST00000271628 MYO1DO94832 1006 aa14.79□□□□□ -0.04
SF3B4-201ENST00000271628 C1GALT1C1LP0DN25 315 aa14.79□□□□□ -0.04
SF3B4-201ENST00000271628 C7P10643 843 aa14.79□□□□□ -0.04
SF3B4-201ENST00000271628 SDC1P18827 310 aa14.79□□□□□ -0.04
SF3B4-201ENST00000271628 HTR1EP28566 365 aa14.79□□□□□ -0.04
SF3B4-201ENST00000271628 GSK3BP49841 420 aa14.79□□□□□ -0.04
SF3B4-201ENST00000271628 LIPEQ05469 1076 aa14.79□□□□□ -0.04
SF3B4-201ENST00000271628 DMPKQ09013 629 aa14.79□□□□□ -0.04
SF3B4-201ENST00000271628 RABL3Q5HYI8 236 aa14.79□□□□□ -0.04
SF3B4-201ENST00000271628 SPANXN4Q5MJ08 99 aa14.79□□□□□ -0.04
SF3B4-201ENST00000271628 LCN8Q6JVE9 175 aa14.79□□□□□ -0.04
SF3B4-201ENST00000271628 CYP2R1Q6VVX0 501 aa14.79□□□□□ -0.04
SF3B4-201ENST00000271628 TMPRSS11BQ86T26 416 aa14.79□□□□□ -0.04
SF3B4-201ENST00000271628 LRRC56Q8IYG6 542 aaPredicted RBP14.79□□□□□ -0.04
SF3B4-201ENST00000271628 METTL25Q8N6Q8 603 aa14.79□□□□□ -0.04
SF3B4-201ENST00000271628 OR5K2Q8NHB8 316 aa14.79□□□□□ -0.04
SF3B4-201ENST00000271628 ASB12Q8WXK4 309 aa14.79□□□□□ -0.04
SF3B4-201ENST00000271628 GTF2H4Q92759 462 aa14.79□□□□□ -0.04
SF3B4-201ENST00000271628 NMD3Q96D46 503 aaKnown RBP14.79□□□□□ -0.04
SF3B4-201ENST00000271628 APOLD1Q96LR9 279 aa14.79□□□□□ -0.04
SF3B4-201ENST00000271628 OR52E6Q96RD3 313 aa14.79□□□□□ -0.04
SF3B4-201ENST00000271628 MTERF1Q99551 399 aaKnown RBP14.79□□□□□ -0.04
SF3B4-201ENST00000271628 HAUS8Q9BT25 410 aa14.79□□□□□ -0.04
SF3B4-201ENST00000271628 OSBPL6Q9BZF3 934 aa14.79□□□□□ -0.04
SF3B4-201ENST00000271628 RBM38Q9H0Z9 239 aaKnown RBP14.79□□□□□ -0.04
SF3B4-201ENST00000271628 AP3M1Q9Y2T2 418 aa14.79□□□□□ -0.04
SF3B4-201ENST00000271628 ATG2BQ96BY7 2078 aa14.79□□□□□ -0.04
SF3B4-201ENST00000271628 ANKRD33BA6NCL7 494 aa14.78□□□□□ -0.04
SF3B4-201ENST00000271628 ACADMP11310 421 aa14.78□□□□□ -0.04
SF3B4-201ENST00000271628 BMP2P12643 396 aa14.78□□□□□ -0.04
SF3B4-201ENST00000271628 ATP6V1B1P15313 513 aa14.78□□□□□ -0.04
SF3B4-201ENST00000271628 PRPS1L1P21108 318 aa14.78□□□□□ -0.04
SF3B4-201ENST00000271628 GRIA3P42263 894 aa14.78□□□□□ -0.04
SF3B4-201ENST00000271628 GK3PQ14409 553 aa14.78□□□□□ -0.04
SF3B4-201ENST00000271628 NRF1Q16656 503 aa14.78□□□□□ -0.04
SF3B4-201ENST00000271628 DPY19L1Q2PZI1 675 aa14.78□□□□□ -0.04
SF3B4-201ENST00000271628 FBXO43Q4G163 708 aa14.78□□□□□ -0.04
SF3B4-201ENST00000271628 PROSER1Q86XN7 944 aa14.78□□□□□ -0.04
SF3B4-201ENST00000271628 ANKFN1Q8N957 763 aa14.78□□□□□ -0.04
SF3B4-201ENST00000271628 KLK6Q92876 244 aa14.78□□□□□ -0.04
SF3B4-201ENST00000271628 SEMA6AQ9H2E6 1030 aa14.78□□□□□ -0.04
SF3B4-201ENST00000271628 RMND5AQ9H871 391 aa14.78□□□□□ -0.04
SF3B4-201ENST00000271628 MAPRE3Q9UPY8 281 aa14.78□□□□□ -0.04
SF3B4-201ENST00000271628 KANSL1LA0AUZ9 987 aa14.78□□□□□ -0.04
SF3B4-201ENST00000271628 PRR23AA6NEV1 266 aa14.78□□□□□ -0.04
SF3B4-201ENST00000271628 FOXE1O00358 373 aaPredicted RBP14.78□□□□□ -0.04
SF3B4-201ENST00000271628 ERN1O75460 977 aaKnown RBP14.78□□□□□ -0.04
SF3B4-201ENST00000271628 SLC35G4P0C7Q5 338 aa14.78□□□□□ -0.04
SF3B4-201ENST00000271628 GLULP15104 373 aa14.78□□□□□ -0.04
SF3B4-201ENST00000271628 COL9A1P20849 921 aa14.78□□□□□ -0.04
SF3B4-201ENST00000271628 S100A3P33764 101 aa14.78□□□□□ -0.04
SF3B4-201ENST00000271628 YBX1P67809 324 aaKnown RBP14.78□□□□□ -0.04
SF3B4-201ENST00000271628 ACSM2AQ08AH3 577 aa14.78□□□□□ -0.04
SF3B4-201ENST00000271628 TSTA3Q13630 321 aaPredicted RBP14.78□□□□□ -0.04
SF3B4-201ENST00000271628 DDX39BQ13838 428 aaKnown RBP14.78□□□□□ -0.04
SF3B4-201ENST00000271628 ACSM2BQ68CK6 577 aa14.78□□□□□ -0.04
SF3B4-201ENST00000271628 LCTLQ6UWM7 567 aa14.78□□□□□ -0.04
SF3B4-201ENST00000271628 MSANTD1Q6ZTZ1 278 aa14.78□□□□□ -0.04
SF3B4-201ENST00000271628 CHST15Q7LFX5 561 aaPredicted RBP14.78□□□□□ -0.04
SF3B4-201ENST00000271628 IFNEQ86WN2 208 aa14.78□□□□□ -0.04
SF3B4-201ENST00000271628 CARM1Q86X55 608 aa14.78□□□□□ -0.04
SF3B4-201ENST00000271628 TBC1D21Q8IYX1 336 aa14.78□□□□□ -0.04
SF3B4-201ENST00000271628 SLC44A3Q8N4M1 653 aa14.78□□□□□ -0.04
SF3B4-201ENST00000271628 KRTCAP2Q8N6L1 136 aa14.78□□□□□ -0.04
SF3B4-201ENST00000271628 OR5AR1Q8NGP9 310 aa14.78□□□□□ -0.04
SF3B4-201ENST00000271628 ZFP28Q8NHY6 868 aa14.78□□□□□ -0.04
SF3B4-201ENST00000271628 SLC5A11Q8WWX8 675 aa14.78□□□□□ -0.04
SF3B4-201ENST00000271628 STARD8Q92502 1023 aa14.78□□□□□ -0.04
SF3B4-201ENST00000271628 UBE2E3Q969T4 207 aa14.78□□□□□ -0.04
SF3B4-201ENST00000271628 PPM1MQ96MI6 270 aa14.78□□□□□ -0.04
SF3B4-201ENST00000271628 TIMM29Q9BSF4 260 aa14.78□□□□□ -0.04
SF3B4-201ENST00000271628 GRIP2Q9C0E4 1043 aa14.78□□□□□ -0.04
SF3B4-201ENST00000271628 TRIT1Q9H3H1 467 aaKnown RBP14.78□□□□□ -0.04
SF3B4-201ENST00000271628 KCNK12Q9HB15 430 aa14.78□□□□□ -0.04
SF3B4-201ENST00000271628 EGFL7Q9UHF1 273 aa14.78□□□□□ -0.04
SF3B4-201ENST00000271628 SLC17A4Q9Y2C5 497 aa14.78□□□□□ -0.04
SF3B4-201ENST00000271628 NUMA1Q14980 2115 aa14.77□□□□□ -0.04
SF3B4-201ENST00000271628 MAGEB17A8MXT2 336 aa14.77□□□□□ -0.04
SF3B4-201ENST00000271628 PCNAP12004 261 aa14.77□□□□□ -0.04
SF3B4-201ENST00000271628 SPIN4Q56A73 249 aa14.77□□□□□ -0.04
SF3B4-201ENST00000271628 PPP4R4Q6NUP7 873 aa14.77□□□□□ -0.04
SF3B4-201ENST00000271628 GPR180Q86V85 440 aa14.77□□□□□ -0.04
SF3B4-201ENST00000271628 SYT12Q8IV01 421 aa14.77□□□□□ -0.04
SF3B4-201ENST00000271628 RIMKLAQ8IXN7 391 aa14.77□□□□□ -0.04
SF3B4-201ENST00000271628 LAS2Q8IYD9 372 aa14.77□□□□□ -0.04
SF3B4-201ENST00000271628 RAB42Q8N4Z0 105 aa14.77□□□□□ -0.04
SF3B4-201ENST00000271628 CLHC1Q8NHS4 586 aa14.77□□□□□ -0.04
SF3B4-201ENST00000271628 HUS1BQ8NHY5 278 aa14.77□□□□□ -0.04
SF3B4-201ENST00000271628 PPWD1Q96BP3 646 aaKnown RBP14.77□□□□□ -0.04
SF3B4-201ENST00000271628 TMEM74Q96NL1 305 aa14.77□□□□□ -0.04
SF3B4-201ENST00000271628 TSSK3Q96PN8 268 aa14.77□□□□□ -0.04
SF3B4-201ENST00000271628 PRM3Q9NNZ6 103 aa14.77□□□□□ -0.04
SF3B4-201ENST00000271628 TM7SF3Q9NS93 570 aa14.77□□□□□ -0.04
SF3B4-201ENST00000271628 CCM2LQ9NUG4 571 aaPredicted RBP14.77□□□□□ -0.04
SF3B4-201ENST00000271628 C2CD4DB7Z1M9 353 aa14.77□□□□□ -0.05
SF3B4-201ENST00000271628 CACNB4O00305 520 aaPredicted RBP14.77□□□□□ -0.05
SF3B4-201ENST00000271628 HNRNPRO43390 633 aaKnown RBP14.77□□□□□ -0.05
SF3B4-201ENST00000271628 H6PDO95479 791 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms