RNA–Protein interactions for RNA: ENST00000254325.8

RFX1-201, Transcript of regulatory factor X1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFX1, Length 4,332 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-201ENST00000254325 PSMA3P25788 255 aa15.21■□□□□ 0.03
RFX1-201ENST00000254325 RPL10P27635 214 aaKnown RBP15.21■□□□□ 0.03
RFX1-201ENST00000254325 UBE3AQ05086 875 aa15.21■□□□□ 0.03
RFX1-201ENST00000254325 KCTD8Q6ZWB6 473 aa15.21■□□□□ 0.03
RFX1-201ENST00000254325 CHST15Q7LFX5 561 aaPredicted RBP15.21■□□□□ 0.03
RFX1-201ENST00000254325 ZFP28Q8NHY6 868 aa15.21■□□□□ 0.03
RFX1-201ENST00000254325 MAGED4Q96JG8 741 aa15.21■□□□□ 0.03
RFX1-201ENST00000254325 TOR3AQ9H497 397 aa15.21■□□□□ 0.03
RFX1-201ENST00000254325 APODP05090 189 aa15.21■□□□□ 0.03
RFX1-201ENST00000254325 HOXB6P17509 224 aaKnown RBP15.21■□□□□ 0.03
RFX1-201ENST00000254325 AMD1P17707 334 aa15.21■□□□□ 0.03
RFX1-201ENST00000254325 LAPTM4AQ15012 233 aa15.21■□□□□ 0.03
RFX1-201ENST00000254325 FOXB2Q5VYV0 432 aa15.21■□□□□ 0.03
RFX1-201ENST00000254325 NEK10Q6ZWH5 1172 aa15.21■□□□□ 0.03
RFX1-201ENST00000254325 ERN2Q76MJ5 926 aaKnown RBP15.21■□□□□ 0.03
RFX1-201ENST00000254325 NRSN1Q8IZ57 195 aa15.21■□□□□ 0.03
RFX1-201ENST00000254325 CLECL1Q8IZS7 167 aa15.21■□□□□ 0.03
RFX1-201ENST00000254325 HUS1BQ8NHY5 278 aa15.21■□□□□ 0.03
RFX1-201ENST00000254325 USP7Q93009 1102 aa15.21■□□□□ 0.03
RFX1-201ENST00000254325 NLNQ9BYT8 704 aa15.21■□□□□ 0.03
RFX1-201ENST00000254325 MAP4K5Q9Y4K4 846 aa15.21■□□□□ 0.03
RFX1-201ENST00000254325 PRAMEF14Q5SWL7 426 aa15.21■□□□□ 0.02
RFX1-201ENST00000254325 PRAMEF13Q5VWM6 474 aa15.21■□□□□ 0.02
RFX1-201ENST00000254325 TRIM40Q6P9F5 258 aa15.21■□□□□ 0.02
RFX1-201ENST00000254325 DUS3LQ96G46 650 aaKnown RBP15.21■□□□□ 0.02
RFX1-201ENST00000254325 C19orf43Q9BQ61 176 aa15.21■□□□□ 0.02
RFX1-201ENST00000254325 KRT84Q9NSB2 600 aa15.21■□□□□ 0.02
RFX1-201ENST00000254325 MAGED1Q9Y5V3 778 aaPredicted RBP15.21■□□□□ 0.02
RFX1-201ENST00000254325 WASH3PC4AMC7 463 aa15.2■□□□□ 0.02
RFX1-201ENST00000254325 RB1P06400 928 aa15.2■□□□□ 0.02
RFX1-201ENST00000254325 GRIA2P42262 883 aa15.2■□□□□ 0.02
RFX1-201ENST00000254325 C16orf87Q6PH81 154 aa15.2■□□□□ 0.02
RFX1-201ENST00000254325 GALNT10Q86SR1 603 aa15.2■□□□□ 0.02
RFX1-201ENST00000254325 LMNTD1Q8N9Z9 388 aa15.2■□□□□ 0.02
RFX1-201ENST00000254325 MFSD2AQ8NA29 543 aa15.2■□□□□ 0.02
RFX1-201ENST00000254325 TERB1Q8NA31 727 aa15.2■□□□□ 0.02
RFX1-201ENST00000254325 OR4K1Q8NGD4 311 aa15.2■□□□□ 0.02
RFX1-201ENST00000254325 SMARCD2Q92925 531 aa15.2■□□□□ 0.02
RFX1-201ENST00000254325 IL17FQ96PD4 163 aa15.2■□□□□ 0.02
RFX1-201ENST00000254325 AIF1LQ9BQI0 150 aa15.2■□□□□ 0.02
RFX1-201ENST00000254325 TRPC4Q9UBN4 977 aa15.2■□□□□ 0.02
RFX1-201ENST00000254325 FAM220BPB1ANY3 271 aa15.2■□□□□ 0.02
RFX1-201ENST00000254325 BCKDKO14874 412 aa15.2■□□□□ 0.02
RFX1-201ENST00000254325 FAM20BO75063 409 aa15.2■□□□□ 0.02
RFX1-201ENST00000254325 CA3P07451 260 aa15.2■□□□□ 0.02
RFX1-201ENST00000254325 ADRB3P13945 408 aa15.2■□□□□ 0.02
RFX1-201ENST00000254325 KELP23276 732 aa15.2■□□□□ 0.02
RFX1-201ENST00000254325 OCA2Q04671 838 aa15.2■□□□□ 0.02
RFX1-201ENST00000254325 CARM1Q86X55 608 aa15.2■□□□□ 0.02
RFX1-201ENST00000254325 GALNT13Q8IUC8 556 aa15.2■□□□□ 0.02
RFX1-201ENST00000254325 ZNF784Q8NCA9 323 aaPredicted RBP15.2■□□□□ 0.02
RFX1-201ENST00000254325 NETO1Q8TDF5 533 aa15.2■□□□□ 0.02
RFX1-201ENST00000254325 TFGQ92734 400 aaPredicted RBP15.2■□□□□ 0.02
RFX1-201ENST00000254325 DTNBP1Q96EV8 351 aa15.2■□□□□ 0.02
RFX1-201ENST00000254325 IMPAD1Q9NX62 359 aa15.2■□□□□ 0.02
RFX1-201ENST00000254325 GPSM3Q9Y4H4 160 aa15.2■□□□□ 0.02
RFX1-201ENST00000254325 PLXNA3P51805 1871 aa15.2■□□□□ 0.02
RFX1-201ENST00000254325 SCAMP1O15126 338 aa15.2■□□□□ 0.02
RFX1-201ENST00000254325 PRMT3O60678 531 aa15.2■□□□□ 0.02
RFX1-201ENST00000254325 C7P10643 843 aa15.2■□□□□ 0.02
RFX1-201ENST00000254325 LAMP1P11279 417 aa15.2■□□□□ 0.02
RFX1-201ENST00000254325 MYF6P23409 242 aa15.2■□□□□ 0.02
RFX1-201ENST00000254325 TUBA4AP68366 448 aa15.2■□□□□ 0.02
RFX1-201ENST00000254325 NFE2L1Q14494 772 aa15.2■□□□□ 0.02
RFX1-201ENST00000254325 CCSMST1Q4G0I0 132 aa15.2■□□□□ 0.02
RFX1-201ENST00000254325 KCTD21Q4G0X4 260 aa15.2■□□□□ 0.02
RFX1-201ENST00000254325 OR7G3Q8NG95 312 aa15.2■□□□□ 0.02
RFX1-201ENST00000254325 SLC5A11Q8WWX8 675 aa15.2■□□□□ 0.02
RFX1-201ENST00000254325 DTD2Q96FN9 168 aa15.2■□□□□ 0.02
RFX1-201ENST00000254325 UHRF1Q96T88 793 aaPredicted RBP15.2■□□□□ 0.02
RFX1-201ENST00000254325 DPH2Q9BQC3 489 aaPredicted RBP15.2■□□□□ 0.02
RFX1-201ENST00000254325 LIN28AQ9H9Z2 209 aaKnown RBP15.2■□□□□ 0.02
RFX1-201ENST00000254325 MYLKQ15746 1914 aa15.19■□□□□ 0.02
RFX1-201ENST00000254325 KLK1P06870 262 aa15.19■□□□□ 0.02
RFX1-201ENST00000254325 MMP12P39900 470 aa15.19■□□□□ 0.02
RFX1-201ENST00000254325 TICAM1Q8IUC6 712 aa15.19■□□□□ 0.02
RFX1-201ENST00000254325 NPAS3Q8IXF0 933 aa15.19■□□□□ 0.02
RFX1-201ENST00000254325 ZCCHC7Q8N3Z6 543 aaKnown RBP15.19■□□□□ 0.02
RFX1-201ENST00000254325 UTP15Q8TED0 518 aaKnown RBP15.19■□□□□ 0.02
RFX1-201ENST00000254325 TRIM39Q9HCM9 518 aa15.19■□□□□ 0.02
RFX1-201ENST00000254325 LINC01553A4QN01 128 aa15.19■□□□□ 0.02
RFX1-201ENST00000254325 MYOGP15173 224 aa15.19■□□□□ 0.02
RFX1-201ENST00000254325 SEC13P55735 322 aa15.19■□□□□ 0.02
RFX1-201ENST00000254325 CDKN3Q16667 212 aa15.19■□□□□ 0.02
RFX1-201ENST00000254325 HNRNPA1L2Q32P51 320 aaKnown RBP15.19■□□□□ 0.02
RFX1-201ENST00000254325 PAGE2Q7Z2X7 111 aa15.19■□□□□ 0.02
RFX1-201ENST00000254325 HDDC3Q8N4P3 179 aa15.19■□□□□ 0.02
RFX1-201ENST00000254325 L3MBTL4Q8NA19 623 aa15.19■□□□□ 0.02
RFX1-201ENST00000254325 RAD21L1Q9H4I0 556 aa15.19■□□□□ 0.02
RFX1-201ENST00000254325 PHPT1Q9NRX4 125 aaPredicted RBP15.19■□□□□ 0.02
RFX1-201ENST00000254325 IRAK4Q9NWZ3 460 aa15.19■□□□□ 0.02
RFX1-201ENST00000254325 RAB23Q9ULC3 237 aa15.19■□□□□ 0.02
RFX1-201ENST00000254325 TPRKBQ9Y3C4 175 aa15.19■□□□□ 0.02
RFX1-201ENST00000254325 H0Y858 1186 aa15.19■□□□□ 0.02
RFX1-201ENST00000254325 POU1F1P28069 291 aa15.19■□□□□ 0.02
RFX1-201ENST00000254325 PRLHRP49683 370 aa15.19■□□□□ 0.02
RFX1-201ENST00000254325 DCDC1P59894 354 aa15.19■□□□□ 0.02
RFX1-201ENST00000254325 TOP3AQ13472 1001 aaPredicted RBP15.19■□□□□ 0.02
RFX1-201ENST00000254325 GGTA1PQ4G0N0 100 aa15.19■□□□□ 0.02
RFX1-201ENST00000254325 NHSL2Q5HYW2 709 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms