RNA–Protein interactions for RNA: ENST00000249064.8

CCDC117-201, Transcript of coiled-coil domain containing 117, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC117, Length 3,985 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC117-201ENST00000249064 XAF1Q6GPH4 301 aa12.94□□□□□ -0.34
CCDC117-201ENST00000249064 KIAA0930Q6ICG6 404 aaPredicted RBP12.94□□□□□ -0.34
CCDC117-201ENST00000249064 FBXL22Q6P050 247 aa12.94□□□□□ -0.34
CCDC117-201ENST00000249064 LARP4Q71RC2 724 aaKnown RBP eCLIP12.94□□□□□ -0.34
CCDC117-201ENST00000249064 B3GNT8Q7Z7M8 397 aa12.94□□□□□ -0.34
CCDC117-201ENST00000249064 GALNT13Q8IUC8 556 aa12.94□□□□□ -0.34
CCDC117-201ENST00000249064 ACBD6Q9BR61 282 aa12.94□□□□□ -0.34
CCDC117-201ENST00000249064 ACOT13Q9NPJ3 140 aa12.94□□□□□ -0.34
CCDC117-201ENST00000249064 KNL1Q8NG31 2342 aa12.94□□□□□ -0.34
CCDC117-201ENST00000249064 NIPSNAP2O75323 286 aa12.94□□□□□ -0.34
CCDC117-201ENST00000249064 ZNF806P0C7X5 589 aa12.94□□□□□ -0.34
CCDC117-201ENST00000249064 COX7A2P14406 83 aa12.94□□□□□ -0.34
CCDC117-201ENST00000249064 ELNP15502 786 aa12.94□□□□□ -0.34
CCDC117-201ENST00000249064 ERP29P30040 261 aaKnown RBP12.94□□□□□ -0.34
CCDC117-201ENST00000249064 TNFSF8P32971 234 aa12.94□□□□□ -0.34
CCDC117-201ENST00000249064 LIPAP38571 399 aa12.94□□□□□ -0.34
CCDC117-201ENST00000249064 KCNQ1P51787 676 aa12.94□□□□□ -0.34
CCDC117-201ENST00000249064 AIF1P55008 147 aa12.94□□□□□ -0.34
CCDC117-201ENST00000249064 MCCD1P59942 119 aaPredicted RBP12.94□□□□□ -0.34
CCDC117-201ENST00000249064 CSNK2BP67870 215 aa12.94□□□□□ -0.34
CCDC117-201ENST00000249064 ADARB1P78563 741 aaKnown RBP12.94□□□□□ -0.34
CCDC117-201ENST00000249064 HNRNPA0Q13151 305 aaKnown RBP12.94□□□□□ -0.34
CCDC117-201ENST00000249064 CTF1Q16619 201 aa12.94□□□□□ -0.34
CCDC117-201ENST00000249064 PYCR3Q53H96 274 aa12.94□□□□□ -0.34
CCDC117-201ENST00000249064 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.94□□□□□ -0.34
CCDC117-201ENST00000249064 BRMS1LQ5PSV4 323 aa12.94□□□□□ -0.34
CCDC117-201ENST00000249064 C6orf136Q5SQH8 315 aa12.94□□□□□ -0.34
CCDC117-201ENST00000249064 USP30Q70CQ3 517 aa12.94□□□□□ -0.34
CCDC117-201ENST00000249064 BEND5Q7L4P6 421 aa12.94□□□□□ -0.34
CCDC117-201ENST00000249064 KRTCAP2Q8N6L1 136 aa12.94□□□□□ -0.34
CCDC117-201ENST00000249064 SLA2Q9H6Q3 261 aa12.94□□□□□ -0.34
CCDC117-201ENST00000249064 CACYBPQ9HB71 228 aaKnown RBP12.94□□□□□ -0.34
CCDC117-201ENST00000249064 MCUBQ9NWR8 336 aa12.94□□□□□ -0.34
CCDC117-201ENST00000249064 DNMT3LQ9UJW3 386 aa12.94□□□□□ -0.34
CCDC117-201ENST00000249064 MYO9BQ13459 2157 aa12.93□□□□□ -0.34
CCDC117-201ENST00000249064 A0A1B0GVC2 190 aa12.93□□□□□ -0.34
CCDC117-201ENST00000249064 A6NIN4 97 aa12.93□□□□□ -0.34
CCDC117-201ENST00000249064 ZNF487B1APH4 448 aa12.93□□□□□ -0.34
CCDC117-201ENST00000249064 B8ZZF3 427 aa12.93□□□□□ -0.34
CCDC117-201ENST00000249064 TPST2O60704 377 aa12.93□□□□□ -0.34
CCDC117-201ENST00000249064 APOC3P02656 99 aa12.93□□□□□ -0.34
CCDC117-201ENST00000249064 IFNA16P05015 189 aa12.93□□□□□ -0.34
CCDC117-201ENST00000249064 DNAJB2P25686 324 aa12.93□□□□□ -0.34
CCDC117-201ENST00000249064 OR1E2P47887 323 aa12.93□□□□□ -0.34
CCDC117-201ENST00000249064 SMSP52788 366 aa12.93□□□□□ -0.34
CCDC117-201ENST00000249064 VEPH1Q14D04 833 aa12.93□□□□□ -0.34
CCDC117-201ENST00000249064 SMYD5Q6GMV2 418 aa12.93□□□□□ -0.34
CCDC117-201ENST00000249064 ZNF280BQ86YH2 543 aa12.93□□□□□ -0.34
CCDC117-201ENST00000249064 SYT12Q8IV01 421 aa12.93□□□□□ -0.34
CCDC117-201ENST00000249064 MFSD6LQ8IWD5 586 aa12.93□□□□□ -0.34
CCDC117-201ENST00000249064 AADATQ8N5Z0 425 aa12.93□□□□□ -0.34
CCDC117-201ENST00000249064 PTCD2Q8WV60 388 aaKnown RBP12.93□□□□□ -0.34
CCDC117-201ENST00000249064 ZFP3Q96NJ6 502 aa12.93□□□□□ -0.34
CCDC117-201ENST00000249064 MGLLQ99685 303 aa12.93□□□□□ -0.34
CCDC117-201ENST00000249064 EBPLQ9BY08 206 aa12.93□□□□□ -0.34
CCDC117-201ENST00000249064 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.93□□□□□ -0.34
CCDC117-201ENST00000249064 NARFLQ9H6Q4 476 aa12.93□□□□□ -0.34
CCDC117-201ENST00000249064 SUV39H1O43463 412 aa12.93□□□□□ -0.34
CCDC117-201ENST00000249064 DHFRP00374 187 aa12.93□□□□□ -0.34
CCDC117-201ENST00000249064 C7P10643 843 aa12.93□□□□□ -0.34
CCDC117-201ENST00000249064 MAZP56270 477 aaKnown RBP12.93□□□□□ -0.34
CCDC117-201ENST00000249064 RPS7P62081 194 aaKnown RBP12.93□□□□□ -0.34
CCDC117-201ENST00000249064 YBX1P67809 324 aaKnown RBP12.93□□□□□ -0.34
CCDC117-201ENST00000249064 CREMQ03060 361 aa12.93□□□□□ -0.34
CCDC117-201ENST00000249064 PTPRRQ15256 657 aa12.93□□□□□ -0.34
CCDC117-201ENST00000249064 SETMARQ53H47 684 aaPredicted RBP12.93□□□□□ -0.34
CCDC117-201ENST00000249064 ZZZ3Q8IYH5 903 aa12.93□□□□□ -0.34
CCDC117-201ENST00000249064 LINC01465Q8N7H1 131 aa12.93□□□□□ -0.34
CCDC117-201ENST00000249064 OTUB1Q96FW1 271 aaPredicted RBP12.93□□□□□ -0.34
CCDC117-201ENST00000249064 HDHD5Q9BXW7 423 aa12.93□□□□□ -0.34
CCDC117-201ENST00000249064 RAD18Q9NS91 495 aa12.93□□□□□ -0.34
CCDC117-201ENST00000249064 THUMPD1Q9NXG2 353 aaKnown RBP12.93□□□□□ -0.34
CCDC117-201ENST00000249064 OPTCQ9UBM4 332 aa12.93□□□□□ -0.34
CCDC117-201ENST00000249064 MLXQ9UH92 298 aa12.93□□□□□ -0.34
CCDC117-201ENST00000249064 RIMKLBQ9ULI2 386 aa12.93□□□□□ -0.34
CCDC117-201ENST00000249064 PCDHB9Q9Y5E1 797 aa12.93□□□□□ -0.34
CCDC117-201ENST00000249064 SCELO95171 688 aa12.93□□□□□ -0.34
CCDC117-201ENST00000249064 FEN1P39748 380 aaKnown RBP12.93□□□□□ -0.34
CCDC117-201ENST00000249064 MLLT6P55198 1093 aaPredicted RBP12.93□□□□□ -0.34
CCDC117-201ENST00000249064 RAB8AP61006 207 aa12.93□□□□□ -0.34
CCDC117-201ENST00000249064 CSTF1Q05048 431 aaKnown RBP12.93□□□□□ -0.34
CCDC117-201ENST00000249064 LIPKQ5VXJ0 399 aa12.93□□□□□ -0.34
CCDC117-201ENST00000249064 KIAA1614Q5VZ46 1190 aa12.93□□□□□ -0.34
CCDC117-201ENST00000249064 ADGRD2Q7Z7M1 963 aa12.93□□□□□ -0.34
CCDC117-201ENST00000249064 ZNF598Q86UK7 904 aaKnown RBP12.93□□□□□ -0.34
CCDC117-201ENST00000249064 MON1AQ86VX9 555 aa12.93□□□□□ -0.34
CCDC117-201ENST00000249064 SIDT2Q8NBJ9 832 aaKnown RBP12.93□□□□□ -0.34
CCDC117-201ENST00000249064 VPS37AQ8NEZ2 397 aa12.93□□□□□ -0.34
CCDC117-201ENST00000249064 CDADC1Q9BWV3 514 aa12.93□□□□□ -0.34
CCDC117-201ENST00000249064 TMEM39AQ9NV64 488 aa12.93□□□□□ -0.34
CCDC117-201ENST00000249064 VAPAQ9P0L0 249 aa12.93□□□□□ -0.34
CCDC117-201ENST00000249064 NFKBIL1Q9UBC1 381 aaPredicted RBP12.93□□□□□ -0.34
CCDC117-201ENST00000249064 KCNN3Q9UGI6 736 aa12.93□□□□□ -0.34
CCDC117-201ENST00000249064 SAMD4AQ9UPU9 718 aaKnown RBP12.93□□□□□ -0.34
CCDC117-201ENST00000249064 A0A0D9SEW6 157 aa12.92□□□□□ -0.34
CCDC117-201ENST00000249064 GABARAPO95166 117 aa12.92□□□□□ -0.34
CCDC117-201ENST00000249064 SOX14O95416 240 aa12.92□□□□□ -0.34
CCDC117-201ENST00000249064 PRAMEF1O95521 474 aa12.92□□□□□ -0.34
CCDC117-201ENST00000249064 HIST1H2AGP0C0S8 130 aaPredicted RBP12.92□□□□□ -0.34
CCDC117-201ENST00000249064 HIST1H2ADP20671 130 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms