RNA–Protein interactions for RNA: ENST00000228916.6

SCNN1A-201, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCNN1A, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-201ENST00000228916 B3GALT6Q96L58 329 aa13.57□□□□□ -0.24
SCNN1A-201ENST00000228916 TSSK3Q96PN8 268 aa13.57□□□□□ -0.24
SCNN1A-201ENST00000228916 KCNC2Q96PR1 638 aa13.57□□□□□ -0.24
SCNN1A-201ENST00000228916 PADI3Q9ULW8 664 aa13.57□□□□□ -0.24
SCNN1A-201ENST00000228916 NOTOA8MTQ0 251 aa13.56□□□□□ -0.24
SCNN1A-201ENST00000228916 CLIC1O00299 241 aa13.56□□□□□ -0.24
SCNN1A-201ENST00000228916 TSPAN3O60637 253 aa13.56□□□□□ -0.24
SCNN1A-201ENST00000228916 STSP08842 583 aa13.56□□□□□ -0.24
SCNN1A-201ENST00000228916 EPB42P16452 691 aa13.56□□□□□ -0.24
SCNN1A-201ENST00000228916 SDC1P18827 310 aa13.56□□□□□ -0.24
SCNN1A-201ENST00000228916 CA5AP35218 305 aa13.56□□□□□ -0.24
SCNN1A-201ENST00000228916 SOX6P35712 828 aa13.56□□□□□ -0.24
SCNN1A-201ENST00000228916 RGS4P49798 205 aa13.56□□□□□ -0.24
SCNN1A-201ENST00000228916 OLR1P78380 273 aa13.56□□□□□ -0.24
SCNN1A-201ENST00000228916 TEKQ02763 1124 aa13.56□□□□□ -0.24
SCNN1A-201ENST00000228916 C5orf22Q49AR2 442 aa13.56□□□□□ -0.24
SCNN1A-201ENST00000228916 GATAD2AQ86YP4 633 aa13.56□□□□□ -0.24
SCNN1A-201ENST00000228916 APOL5Q9BWW9 433 aa13.56□□□□□ -0.24
SCNN1A-201ENST00000228916 OLA1Q9NTK5 396 aaKnown RBP13.56□□□□□ -0.24
SCNN1A-201ENST00000228916 DDX28Q9NUL7 540 aaKnown RBP13.56□□□□□ -0.24
SCNN1A-201ENST00000228916 C14orf119Q9NWQ9 140 aa13.56□□□□□ -0.24
SCNN1A-201ENST00000228916 CFL2Q9Y281 166 aa13.56□□□□□ -0.24
SCNN1A-201ENST00000228916 AP3D1O14617 1153 aa13.56□□□□□ -0.24
SCNN1A-201ENST00000228916 ZNF623O75123 536 aa13.56□□□□□ -0.24
SCNN1A-201ENST00000228916 KRT6AP02538 564 aa13.56□□□□□ -0.24
SCNN1A-201ENST00000228916 KRT6BP04259 564 aa13.56□□□□□ -0.24
SCNN1A-201ENST00000228916 ENGP17813 658 aa13.56□□□□□ -0.24
SCNN1A-201ENST00000228916 KRT6CP48668 564 aa13.56□□□□□ -0.24
SCNN1A-201ENST00000228916 RACK1P63244 317 aaKnown RBP13.56□□□□□ -0.24
SCNN1A-201ENST00000228916 RING1Q06587 406 aa13.56□□□□□ -0.24
SCNN1A-201ENST00000228916 MAP2K5Q13163 448 aa13.56□□□□□ -0.24
SCNN1A-201ENST00000228916 USP50Q70EL3 339 aaPredicted RBP13.56□□□□□ -0.24
SCNN1A-201ENST00000228916 UTS2BQ765I0 119 aa13.56□□□□□ -0.24
SCNN1A-201ENST00000228916 VN1R5Q7Z5H4 357 aa13.56□□□□□ -0.24
SCNN1A-201ENST00000228916 NRARPQ7Z6K4 114 aa13.56□□□□□ -0.24
SCNN1A-201ENST00000228916 TCAIMQ8N3R3 496 aa13.56□□□□□ -0.24
SCNN1A-201ENST00000228916 LKAAEAR1Q8TD35 194 aa13.56□□□□□ -0.24
SCNN1A-201ENST00000228916 NELL1Q92832 810 aa13.56□□□□□ -0.24
SCNN1A-201ENST00000228916 TMCO6Q96DC7 493 aa13.56□□□□□ -0.24
SCNN1A-201ENST00000228916 MTFMTQ96DP5 389 aaKnown RBP13.56□□□□□ -0.24
SCNN1A-201ENST00000228916 SLC30A2Q9BRI3 323 aa13.56□□□□□ -0.24
SCNN1A-201ENST00000228916 ADGRE3Q9BY15 652 aa13.56□□□□□ -0.24
SCNN1A-201ENST00000228916 GPR83Q9NYM4 423 aa13.56□□□□□ -0.24
SCNN1A-201ENST00000228916 NUP214P35658 2090 aaPredicted RBP13.56□□□□□ -0.24
SCNN1A-201ENST00000228916 A0A075B6Q4 140 aa13.55□□□□□ -0.24
SCNN1A-201ENST00000228916 CENPXA8MT69 81 aa13.55□□□□□ -0.24
SCNN1A-201ENST00000228916 ALX3O95076 343 aa13.55□□□□□ -0.24
SCNN1A-201ENST00000228916 PDYNP01213 254 aa13.55□□□□□ -0.24
SCNN1A-201ENST00000228916 PRKCAP17252 672 aa13.55□□□□□ -0.24
SCNN1A-201ENST00000228916 GABRB1P18505 474 aa13.55□□□□□ -0.24
SCNN1A-201ENST00000228916 CRISP3P54108 245 aa13.55□□□□□ -0.24
SCNN1A-201ENST00000228916 MRPS15P82914 257 aaKnown RBP13.55□□□□□ -0.24
SCNN1A-201ENST00000228916 MTAPQ13126 283 aa13.55□□□□□ -0.24
SCNN1A-201ENST00000228916 EIF4HQ15056 248 aaKnown RBP13.55□□□□□ -0.24
SCNN1A-201ENST00000228916 C10orf120Q5SQS8 335 aa13.55□□□□□ -0.24
SCNN1A-201ENST00000228916 C10orf62Q5T681 223 aaPredicted RBP13.55□□□□□ -0.24
SCNN1A-201ENST00000228916 SPRYD7Q5W111 196 aa13.55□□□□□ -0.24
SCNN1A-201ENST00000228916 PTRHD1Q6GMV3 140 aaKnown RBP13.55□□□□□ -0.24
SCNN1A-201ENST00000228916 OR4F3Q6IEY1 312 aa13.55□□□□□ -0.24
SCNN1A-201ENST00000228916 PDE12Q6L8Q7 609 aaKnown RBP13.55□□□□□ -0.24
SCNN1A-201ENST00000228916 TTC16Q8NEE8 873 aa13.55□□□□□ -0.24
SCNN1A-201ENST00000228916 CRELD1Q96HD1 420 aa13.55□□□□□ -0.24
SCNN1A-201ENST00000228916 FUBP3Q96I24 572 aaKnown RBP eCLIP13.55□□□□□ -0.24
SCNN1A-201ENST00000228916 GDF15Q99988 308 aa13.55□□□□□ -0.24
SCNN1A-201ENST00000228916 ERVK13-1Q9NX77 482 aa13.55□□□□□ -0.24
SCNN1A-201ENST00000228916 TAS2R9Q9NYW1 312 aa13.55□□□□□ -0.24
SCNN1A-201ENST00000228916 IL17CQ9P0M4 197 aa13.55□□□□□ -0.24
SCNN1A-201ENST00000228916 PCDHB8Q9UN66 801 aa13.55□□□□□ -0.24
SCNN1A-201ENST00000228916 BTBD3Q9Y2F9 522 aa13.55□□□□□ -0.24
SCNN1A-201ENST00000228916 A0A0U1RQF3 1178 aa13.55□□□□□ -0.24
SCNN1A-201ENST00000228916 PLK4O00444 970 aa13.55□□□□□ -0.24
SCNN1A-201ENST00000228916 CTDSP2O14595 271 aa13.55□□□□□ -0.24
SCNN1A-201ENST00000228916 KDELR3O43731 214 aa13.55□□□□□ -0.24
SCNN1A-201ENST00000228916 KIAA0513O60268 411 aa13.55□□□□□ -0.24
SCNN1A-201ENST00000228916 UGT2B17O75795 530 aa13.55□□□□□ -0.24
SCNN1A-201ENST00000228916 CLDN9O95484 217 aa13.55□□□□□ -0.24
SCNN1A-201ENST00000228916 RPS3P23396 243 aaKnown RBP eCLIP13.55□□□□□ -0.24
SCNN1A-201ENST00000228916 PRPH2P23942 346 aa13.55□□□□□ -0.24
SCNN1A-201ENST00000228916 MGAT3Q09327 533 aa13.55□□□□□ -0.24
SCNN1A-201ENST00000228916 ABRQ12979 859 aa13.55□□□□□ -0.24
SCNN1A-201ENST00000228916 DUOXA1Q1HG43 343 aa13.55□□□□□ -0.24
SCNN1A-201ENST00000228916 CXCL17Q6UXB2 119 aa13.55□□□□□ -0.24
SCNN1A-201ENST00000228916 CERS6Q6ZMG9 384 aa13.55□□□□□ -0.24
SCNN1A-201ENST00000228916 FLCNQ8NFG4 579 aa13.55□□□□□ -0.24
SCNN1A-201ENST00000228916 ELMO1Q92556 727 aa13.55□□□□□ -0.24
SCNN1A-201ENST00000228916 UROC1Q96N76 676 aa13.55□□□□□ -0.24
SCNN1A-201ENST00000228916 RAD18Q9NS91 495 aa13.55□□□□□ -0.24
SCNN1A-201ENST00000228916 PCDHGB3Q9Y5G1 929 aa13.55□□□□□ -0.24
SCNN1A-201ENST00000228916 F5H5T6 163 aa13.55□□□□□ -0.24
SCNN1A-201ENST00000228916 GFRA2O00451 464 aa13.55□□□□□ -0.24
SCNN1A-201ENST00000228916 ARHGAP33O14559 1287 aa13.55□□□□□ -0.24
SCNN1A-201ENST00000228916 EPORP19235 508 aa13.55□□□□□ -0.24
SCNN1A-201ENST00000228916 DGKAP23743 735 aa13.55□□□□□ -0.24
SCNN1A-201ENST00000228916 TIE1P35590 1138 aa13.55□□□□□ -0.24
SCNN1A-201ENST00000228916 NUDT6P53370 316 aa13.55□□□□□ -0.24
SCNN1A-201ENST00000228916 KCNJ10P78508 379 aa13.55□□□□□ -0.24
SCNN1A-201ENST00000228916 E2F2Q14209 437 aa13.55□□□□□ -0.24
SCNN1A-201ENST00000228916 ZNF517Q6ZMY9 492 aaPredicted RBP13.55□□□□□ -0.24
SCNN1A-201ENST00000228916 GALNT12Q8IXK2 581 aa13.55□□□□□ -0.24
SCNN1A-201ENST00000228916 NEDD4LQ96PU5 975 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms