RNA–Protein interactions for RNA: ENST00000070846.10

PKP2-201, Transcript of plakophilin 2, humanhuman

TSL 1 (best) BASIC

Gene PKP2, Length 4,241 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP2-201ENST00000070846 NUP54Q7Z3B4 507 aa11.06□□□□□ -0.64
PKP2-201ENST00000070846 GALNT5Q7Z7M9 940 aa11.06□□□□□ -0.64
PKP2-201ENST00000070846 RNF168Q8IYW5 571 aaPredicted RBP11.06□□□□□ -0.64
PKP2-201ENST00000070846 KCNA7Q96RP8 456 aa11.06□□□□□ -0.64
PKP2-201ENST00000070846 CD244Q9BZW8 370 aa11.06□□□□□ -0.64
PKP2-201ENST00000070846 KCNN2Q9H2S1 579 aa11.06□□□□□ -0.64
PKP2-201ENST00000070846 IL26Q9NPH9 171 aa11.06□□□□□ -0.64
PKP2-201ENST00000070846 RASSF1Q9NS23 344 aa11.06□□□□□ -0.64
PKP2-201ENST00000070846 PDP1Q9P0J1 537 aaPredicted RBP11.06□□□□□ -0.64
PKP2-201ENST00000070846 MCM8Q9UJA3 840 aa11.06□□□□□ -0.64
PKP2-201ENST00000070846 FAM149AA5PLN7 773 aa11.05□□□□□ -0.64
PKP2-201ENST00000070846 KHNYNO15037 678 aaKnown RBP11.05□□□□□ -0.64
PKP2-201ENST00000070846 PRSS56P0CW18 603 aa11.05□□□□□ -0.64
PKP2-201ENST00000070846 SLC26A3P40879 764 aa11.05□□□□□ -0.64
PKP2-201ENST00000070846 KHKP50053 298 aa11.05□□□□□ -0.64
PKP2-201ENST00000070846 CYP27C1Q4G0S4 372 aa11.05□□□□□ -0.64
PKP2-201ENST00000070846 ANKRD54Q6NXT1 300 aa11.05□□□□□ -0.64
PKP2-201ENST00000070846 RANBP10Q6VN20 620 aa11.05□□□□□ -0.64
PKP2-201ENST00000070846 PTCHD4Q6ZW05 846 aa11.05□□□□□ -0.64
PKP2-201ENST00000070846 NET1Q7Z628 596 aaPredicted RBP11.05□□□□□ -0.64
PKP2-201ENST00000070846 SERHL2Q9H4I8 314 aa11.05□□□□□ -0.64
PKP2-201ENST00000070846 SLC24A3Q9HC58 644 aa11.05□□□□□ -0.64
PKP2-201ENST00000070846 SERHLQ9NQF3 203 aa11.05□□□□□ -0.64
PKP2-201ENST00000070846 SPATA7Q9P0W8 599 aa11.05□□□□□ -0.64
PKP2-201ENST00000070846 IFT80Q9P2H3 777 aaPredicted RBP11.05□□□□□ -0.64
PKP2-201ENST00000070846 PCDHGA2Q9Y5H1 932 aa11.05□□□□□ -0.64
PKP2-201ENST00000070846 SPO11Q9Y5K1 396 aa11.05□□□□□ -0.64
PKP2-201ENST00000070846 CLIC1O00299 241 aa11.05□□□□□ -0.64
PKP2-201ENST00000070846 TP73O15350 636 aa11.05□□□□□ -0.64
PKP2-201ENST00000070846 ITM2AO43736 263 aa11.05□□□□□ -0.64
PKP2-201ENST00000070846 EBLN1P0CF75 366 aa11.05□□□□□ -0.64
PKP2-201ENST00000070846 RPS15P62841 145 aaKnown RBP11.05□□□□□ -0.64
PKP2-201ENST00000070846 SP140Q13342 867 aa11.05□□□□□ -0.64
PKP2-201ENST00000070846 MOGSQ13724 837 aa11.05□□□□□ -0.64
PKP2-201ENST00000070846 DEFB110Q30KQ9 67 aa11.05□□□□□ -0.64
PKP2-201ENST00000070846 SMARCD3Q6STE5 483 aa11.05□□□□□ -0.64
PKP2-201ENST00000070846 IQCHQ86VS3 1027 aa11.05□□□□□ -0.64
PKP2-201ENST00000070846 ZDHHC14Q8IZN3 488 aa11.05□□□□□ -0.64
PKP2-201ENST00000070846 PLD6Q8N2A8 252 aaKnown RBP11.05□□□□□ -0.64
PKP2-201ENST00000070846 VN1R2Q8NFZ6 395 aa11.05□□□□□ -0.64
PKP2-201ENST00000070846 POP5Q969H6 163 aaKnown RBP11.05□□□□□ -0.64
PKP2-201ENST00000070846 TLCD1Q96CP7 247 aa11.05□□□□□ -0.64
PKP2-201ENST00000070846 ZNF184Q99676 751 aaPredicted RBP11.05□□□□□ -0.64
PKP2-201ENST00000070846 DCUN1D5Q9BTE7 237 aa11.05□□□□□ -0.64
PKP2-201ENST00000070846 CRISPLD1Q9H336 500 aa11.05□□□□□ -0.64
PKP2-201ENST00000070846 LDAHQ9H6V9 325 aa11.05□□□□□ -0.64
PKP2-201ENST00000070846 METTL7AQ9H8H3 244 aa11.05□□□□□ -0.64
PKP2-201ENST00000070846 TBC1D23Q9NUY8 699 aa11.05□□□□□ -0.64
PKP2-201ENST00000070846 MICAL3Q7RTP6 2002 aa11.05□□□□□ -0.64
PKP2-201ENST00000070846 MYOCOSA0A1B0GUC4 107 aa11.05□□□□□ -0.64
PKP2-201ENST00000070846 A6NCN8 305 aa11.05□□□□□ -0.64
PKP2-201ENST00000070846 SRRM3A6NNA2 597 aaPredicted RBP11.05□□□□□ -0.64
PKP2-201ENST00000070846 MANBAO00462 879 aa11.05□□□□□ -0.64
PKP2-201ENST00000070846 PCDHGA12O60330 932 aa11.05□□□□□ -0.64
PKP2-201ENST00000070846 S1PR4O95977 384 aa11.05□□□□□ -0.64
PKP2-201ENST00000070846 FOXN2P32314 431 aa11.05□□□□□ -0.64
PKP2-201ENST00000070846 RPP38P78345 283 aaKnown RBP11.05□□□□□ -0.64
PKP2-201ENST00000070846 MBTPS1Q14703 1052 aa11.05□□□□□ -0.64
PKP2-201ENST00000070846 SLC9B1Q4ZJI4 515 aa11.05□□□□□ -0.64
PKP2-201ENST00000070846 MTX3Q5HYI7 312 aa11.05□□□□□ -0.64
PKP2-201ENST00000070846 C1orf189Q5VU69 101 aa11.05□□□□□ -0.64
PKP2-201ENST00000070846 ALKAL1Q6UXT8 129 aa11.05□□□□□ -0.64
PKP2-201ENST00000070846 MGME1Q9BQP7 344 aa11.05□□□□□ -0.64
PKP2-201ENST00000070846 SLC35A5Q9BS91 424 aa11.05□□□□□ -0.64
PKP2-201ENST00000070846 SLC29A3Q9BZD2 475 aa11.05□□□□□ -0.64
PKP2-201ENST00000070846 LRCH1Q9Y2L9 728 aa11.05□□□□□ -0.64
PKP2-201ENST00000070846 GSTK1Q9Y2Q3 226 aa11.05□□□□□ -0.64
PKP2-201ENST00000070846 PNMA8CA0A1B0GUJ8 204 aa11.05□□□□□ -0.64
PKP2-201ENST00000070846 NME6O75414 186 aaPredicted RBP11.05□□□□□ -0.64
PKP2-201ENST00000070846 TCEA3O75764 348 aa11.05□□□□□ -0.64
PKP2-201ENST00000070846 PROS1P07225 676 aa11.05□□□□□ -0.64
PKP2-201ENST00000070846 PARS2Q7L3T8 475 aaKnown RBP11.05□□□□□ -0.64
PKP2-201ENST00000070846 JAZF1Q86VZ6 243 aa11.05□□□□□ -0.64
PKP2-201ENST00000070846 PGAM4Q8N0Y7 254 aa11.05□□□□□ -0.64
PKP2-201ENST00000070846 CACTIN-AS1Q8N1I8 211 aa11.05□□□□□ -0.64
PKP2-201ENST00000070846 FITM2Q8N6M3 262 aa11.05□□□□□ -0.64
PKP2-201ENST00000070846 OR4K1Q8NGD4 311 aa11.05□□□□□ -0.64
PKP2-201ENST00000070846 ZDHHC1Q8WTX9 485 aa11.05□□□□□ -0.64
PKP2-201ENST00000070846 KLHL6Q8WZ60 621 aa11.05□□□□□ -0.64
PKP2-201ENST00000070846 ART5Q96L15 291 aa11.05□□□□□ -0.64
PKP2-201ENST00000070846 NSMCE3Q96MG7 304 aa11.05□□□□□ -0.64
PKP2-201ENST00000070846 CIB1Q99828 191 aa11.05□□□□□ -0.64
PKP2-201ENST00000070846 DEFB126Q9BYW3 111 aa11.05□□□□□ -0.64
PKP2-201ENST00000070846 GIMAP2Q9UG22 337 aa11.05□□□□□ -0.64
PKP2-201ENST00000070846 SVILO95425 2214 aa11.04□□□□□ -0.64
PKP2-201ENST00000070846 TNFAIP8O95379 198 aa11.04□□□□□ -0.64
PKP2-201ENST00000070846 F11P03951 625 aa11.04□□□□□ -0.64
PKP2-201ENST00000070846 OPN1SWP03999 348 aa11.04□□□□□ -0.64
PKP2-201ENST00000070846 IL1RNP18510 177 aa11.04□□□□□ -0.64
PKP2-201ENST00000070846 ITGB7P26010 798 aa11.04□□□□□ -0.64
PKP2-201ENST00000070846 AK4P27144 223 aaPredicted RBP11.04□□□□□ -0.64
PKP2-201ENST00000070846 ATP12AP54707 1039 aa11.04□□□□□ -0.64
PKP2-201ENST00000070846 MGAT3Q09327 533 aa11.04□□□□□ -0.64
PKP2-201ENST00000070846 RFX4Q33E94 735 aa11.04□□□□□ -0.64
PKP2-201ENST00000070846 REP15Q6BDI9 236 aa11.04□□□□□ -0.64
PKP2-201ENST00000070846 GPR149Q86SP6 731 aa11.04□□□□□ -0.64
PKP2-201ENST00000070846 TMEM135Q86UB9 458 aa11.04□□□□□ -0.64
PKP2-201ENST00000070846 CSNK1A1LQ8N752 337 aa11.04□□□□□ -0.64
PKP2-201ENST00000070846 PHOSPHO1Q8TCT1 267 aa11.04□□□□□ -0.64
PKP2-201ENST00000070846 UHRF1Q96T88 793 aaPredicted RBP11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms