RNA–Protein interactions for RNA: ENSMUST00000096198.9

Scn8a-202, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

TSL 1 (best) BASIC

Gene Scn8a, Length 1,072 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-202ENSMUST00000096198 Taf5Q8C092 801 aa7.48□□□□□ -1.21
Scn8a-202ENSMUST00000096198 Trub1Q8C0D0 338 aaKnown RBP7.48□□□□□ -1.21
Scn8a-202ENSMUST00000096198 Ttc34Q8C0Q3 554 aa7.48□□□□□ -1.21
Scn8a-202ENSMUST00000096198 Zfpm2Q8CCH7 1151 aa7.48□□□□□ -1.21
Scn8a-202ENSMUST00000096198 C1sbQ8CFG8 688 aa7.48□□□□□ -1.21
Scn8a-202ENSMUST00000096198 Smtnl2Q8CI12 456 aa7.48□□□□□ -1.21
Scn8a-202ENSMUST00000096198 Slco4a1Q8K078 723 aa7.48□□□□□ -1.21
Scn8a-202ENSMUST00000096198 ZwilchQ8R060 589 aa7.48□□□□□ -1.21
Scn8a-202ENSMUST00000096198 NclnQ8VCM8 563 aaKnown RBP7.48□□□□□ -1.21
Scn8a-202ENSMUST00000096198 Hsd17b13Q8VCR2 304 aa7.48□□□□□ -1.21
Scn8a-202ENSMUST00000096198 Calhm2Q8VEC4 323 aa7.48□□□□□ -1.21
Scn8a-202ENSMUST00000096198 Olfr357Q8VFP4 308 aa7.48□□□□□ -1.21
Scn8a-202ENSMUST00000096198 Olfr784Q8VFZ9 319 aa7.48□□□□□ -1.21
Scn8a-202ENSMUST00000096198 Pcdhb6Q91XZ4 772 aa7.48□□□□□ -1.21
Scn8a-202ENSMUST00000096198 Gjc3Q921C1 269 aa7.48□□□□□ -1.21
Scn8a-202ENSMUST00000096198 Mrpl43Q99N89 183 aa7.48□□□□□ -1.21
Scn8a-202ENSMUST00000096198 Rnf138Q9CQE0 245 aaKnown RBP7.48□□□□□ -1.21
Scn8a-202ENSMUST00000096198 Dph2Q9CR25 489 aa7.48□□□□□ -1.21
Scn8a-202ENSMUST00000096198 Cep97Q9CZ62 856 aa7.48□□□□□ -1.21
Scn8a-202ENSMUST00000096198 Adck1Q9D0L4 525 aa7.48□□□□□ -1.21
Scn8a-202ENSMUST00000096198 3830403N18RikQ9D6C3 208 aa7.48□□□□□ -1.21
Scn8a-202ENSMUST00000096198 Tsc22d4Q9EQN3 387 aa7.48□□□□□ -1.21
Scn8a-202ENSMUST00000096198 Prl2a1Q9JHK0 228 aa7.48□□□□□ -1.21
Scn8a-202ENSMUST00000096198 Nfu1Q9QZ23 255 aa7.48□□□□□ -1.21
Scn8a-202ENSMUST00000096198 CnmdQ9Z1F6 334 aa7.48□□□□□ -1.21
Scn8a-202ENSMUST00000096198 Gm28919A0A087WP35 240 aa7.47□□□□□ -1.21
Scn8a-202ENSMUST00000096198 Ighv1-43A0A0A6YXN5 117 aa7.47□□□□□ -1.21
Scn8a-202ENSMUST00000096198 IqccA2ADZ8 418 aa7.47□□□□□ -1.21
Scn8a-202ENSMUST00000096198 Arhgap42B2RQE8 841 aa7.47□□□□□ -1.21
Scn8a-202ENSMUST00000096198 Amd2D3Z6H8 334 aa7.47□□□□□ -1.21
Scn8a-202ENSMUST00000096198 Tmem44E9Q4M0 433 aa7.47□□□□□ -1.21
Scn8a-202ENSMUST00000096198 Sec24cG3X972 1096 aaKnown RBP7.47□□□□□ -1.21
Scn8a-202ENSMUST00000096198 Zfp850J3QPC5 689 aa7.47□□□□□ -1.21
Scn8a-202ENSMUST00000096198 Efna3O08545 230 aa7.47□□□□□ -1.21
Scn8a-202ENSMUST00000096198 E2f3O35261 457 aa7.47□□□□□ -1.21
Scn8a-202ENSMUST00000096198 Stc1O55183 247 aa7.47□□□□□ -1.21
Scn8a-202ENSMUST00000096198 InvsO89019 1062 aa7.47□□□□□ -1.21
Scn8a-202ENSMUST00000096198 MosP00536 390 aa7.47□□□□□ -1.21
Scn8a-202ENSMUST00000096198 Mucl2P02815 138 aa7.47□□□□□ -1.21
Scn8a-202ENSMUST00000096198 Amd1P0DMN7 334 aa7.47□□□□□ -1.21
Scn8a-202ENSMUST00000096198 Anxa4P97429 319 aa7.47□□□□□ -1.21
Scn8a-202ENSMUST00000096198 Defb23Q30KP0 166 aa7.47□□□□□ -1.21
Scn8a-202ENSMUST00000096198 Ccndbp1Q3TVC7 356 aa7.47□□□□□ -1.21
Scn8a-202ENSMUST00000096198 Prmt9Q3U3W5 846 aa7.47□□□□□ -1.21
Scn8a-202ENSMUST00000096198 Ugt3a1Q3UP75 523 aa7.47□□□□□ -1.21
Scn8a-202ENSMUST00000096198 Slfn4Q3UV66 602 aa7.47□□□□□ -1.21
Scn8a-202ENSMUST00000096198 Zmat1Q3V0C1 714 aa7.47□□□□□ -1.21
Scn8a-202ENSMUST00000096198 Gm5168Q4KL04 211 aa7.47□□□□□ -1.21
Scn8a-202ENSMUST00000096198 Pla2g4dQ50L43 825 aa7.47□□□□□ -1.21
Scn8a-202ENSMUST00000096198 Coq8bQ566J8 533 aa7.47□□□□□ -1.21
Scn8a-202ENSMUST00000096198 Cep112Q5PR68 954 aa7.47□□□□□ -1.21
Scn8a-202ENSMUST00000096198 Sgk494Q5SYL1 278 aa7.47□□□□□ -1.21
Scn8a-202ENSMUST00000096198 Q8BGC1 442 aa7.47□□□□□ -1.21
Scn8a-202ENSMUST00000096198 Ankrd9Q8BH83 326 aa7.47□□□□□ -1.21
Scn8a-202ENSMUST00000096198 SgtaQ8BJU0 315 aa7.47□□□□□ -1.21
Scn8a-202ENSMUST00000096198 Rmdn2Q8BSE0 410 aa7.47□□□□□ -1.21
Scn8a-202ENSMUST00000096198 Ccdc28aQ8CEI3 192 aa7.47□□□□□ -1.21
Scn8a-202ENSMUST00000096198 H6pdQ8CFX1 789 aa7.47□□□□□ -1.21
Scn8a-202ENSMUST00000096198 Stau2Q8CJ67 570 aaKnown RBP7.47□□□□□ -1.21
Scn8a-202ENSMUST00000096198 Fnbp1lQ8K012 605 aa7.47□□□□□ -1.21
Scn8a-202ENSMUST00000096198 Unc5dQ8K1S2 956 aa7.47□□□□□ -1.21
Scn8a-202ENSMUST00000096198 Grhl2Q8K5C0 625 aa7.47□□□□□ -1.21
Scn8a-202ENSMUST00000096198 FbrsQ8R089 466 aa7.47□□□□□ -1.21
Scn8a-202ENSMUST00000096198 Olfr846Q8VET8 312 aa7.47□□□□□ -1.21
Scn8a-202ENSMUST00000096198 Spns2Q91VM4 549 aa7.47□□□□□ -1.21
Scn8a-202ENSMUST00000096198 Tbrg4Q91YM4 630 aaKnown RBP7.47□□□□□ -1.21
Scn8a-202ENSMUST00000096198 Raf1Q99N57 648 aa7.47□□□□□ -1.21
Scn8a-202ENSMUST00000096198 Stx17Q9D0I4 301 aa7.47□□□□□ -1.21
Scn8a-202ENSMUST00000096198 Med8Q9D7W5 268 aa7.47□□□□□ -1.21
Scn8a-202ENSMUST00000096198 Hcar2Q9EP66 360 aa7.47□□□□□ -1.21
Scn8a-202ENSMUST00000096198 KelQ9EQF2 713 aa7.47□□□□□ -1.21
Scn8a-202ENSMUST00000096198 GhrlQ9EQX0 117 aa7.47□□□□□ -1.21
Scn8a-202ENSMUST00000096198 Strn3Q9ERG2 796 aa7.47□□□□□ -1.21
Scn8a-202ENSMUST00000096198 Il1rl2Q9ERS7 574 aa7.47□□□□□ -1.21
Scn8a-202ENSMUST00000096198 B3galt5Q9JI67 308 aa7.47□□□□□ -1.21
Scn8a-202ENSMUST00000096198 Spag6Q9JLI7 507 aa7.47□□□□□ -1.21
Scn8a-202ENSMUST00000096198 Dusp13Q9QYJ7 198 aa7.47□□□□□ -1.21
Scn8a-202ENSMUST00000096198 PigqQ9QYT7 581 aa7.47□□□□□ -1.21
Scn8a-202ENSMUST00000096198 RbmxQ9WV02 391 aaKnown RBP7.47□□□□□ -1.21
Scn8a-202ENSMUST00000096198 Shcbp1Q9Z179 668 aa7.47□□□□□ -1.21
Scn8a-202ENSMUST00000096198 Mecp2Q9Z2D6 484 aaKnown RBP7.47□□□□□ -1.21
Scn8a-202ENSMUST00000096198 Lgr4A2ARI4 951 aa7.46□□□□□ -1.22
Scn8a-202ENSMUST00000096198 Ssxb9A2BI93 185 aa7.46□□□□□ -1.22
Scn8a-202ENSMUST00000096198 Cfap221A9Q751 836 aa7.46□□□□□ -1.22
Scn8a-202ENSMUST00000096198 Cldn34b1B1AZQ8 209 aa7.46□□□□□ -1.22
Scn8a-202ENSMUST00000096198 Tarm1B6A8R8 288 aa7.46□□□□□ -1.22
Scn8a-202ENSMUST00000096198 Prr23a2D3YWX5 253 aa7.46□□□□□ -1.22
Scn8a-202ENSMUST00000096198 C7D3YXF5 845 aa7.46□□□□□ -1.22
Scn8a-202ENSMUST00000096198 Gm4450E9Q007 373 aa7.46□□□□□ -1.22
Scn8a-202ENSMUST00000096198 Arfip1G5E8V9 373 aa7.46□□□□□ -1.22
Scn8a-202ENSMUST00000096198 Pmm1O35621 262 aa7.46□□□□□ -1.22
Scn8a-202ENSMUST00000096198 Cbx4O55187 551 aa7.46□□□□□ -1.22
Scn8a-202ENSMUST00000096198 Ap1g2O88512 791 aa7.46□□□□□ -1.22
Scn8a-202ENSMUST00000096198 Lmx1bO88609 395 aa7.46□□□□□ -1.22
Scn8a-202ENSMUST00000096198 Tgfb3P17125 410 aa7.46□□□□□ -1.22
Scn8a-202ENSMUST00000096198 Zfy2P20662 777 aa7.46□□□□□ -1.22
Scn8a-202ENSMUST00000096198 Cops2P61202 443 aaKnown RBP7.46□□□□□ -1.22
Scn8a-202ENSMUST00000096198 Ap1s1P61967 158 aa7.46□□□□□ -1.22
Scn8a-202ENSMUST00000096198 Creb1Q01147 341 aaKnown RBP7.46□□□□□ -1.22
Scn8a-202ENSMUST00000096198 InscQ3HNM7 579 aa7.46□□□□□ -1.22
Retrieved 100 of 22,080 RNA–protein pairs in 40.7 ms