RNA–Protein interactions for RNA: ENSMUST00000053440.7

Ccdc40-202, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc40, Length 3,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-202ENSMUST00000053440 Gtf2h2Q9JIB4 396 aa9.52□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 Upk1bQ9Z2C6 260 aa9.52□□□□□ -0.88
Ccdc40-202ENSMUST00000053440 BC024063A0A1W2P7G7 749 aa9.52□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Fbxo47A2A6H3 451 aa9.52□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Olfr1253A2AUA2 318 aa9.52□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Olfr564E9PWA8 316 aa9.52□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Gm4450E9Q007 373 aa9.52□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Gm16494E9Q2Z4 87 aa9.52□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Grk4O70291 574 aa9.52□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Hnf1bP27889 558 aa9.52□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Tacr2P30549 384 aa9.52□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Gbx1P82976 418 aa9.52□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Acsm3Q3UNX5 580 aa9.52□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Hsd3b4Q61767 373 aa9.52□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Foxb2Q64733 428 aa9.52□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Fam189a1Q6A044 515 aa9.52□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Cep78Q6IRU7 790 aa9.52□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Olfr1251Q7TQZ3 318 aa9.52□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Dsg1bQ7TSF1 1060 aa9.52□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Rmnd5aQ80YQ8 391 aa9.52□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Ubp1Q811S7 540 aa9.52□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 A730061H03RikQ8BGD2 154 aa9.52□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Dmtf1Q8CE22 761 aa9.52□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Vmn1r24Q8R2D6 296 aa9.52□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 KptnQ8VCX6 430 aa9.52□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Olfr437Q8VEV1 310 aa9.52□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Olfr441Q8VFS5 310 aa9.52□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Sp7Q8VI67 428 aa9.52□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 MlycdQ99J39 492 aa9.52□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Timm50Q9D880 353 aa9.52□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Ptges3lQ9D9A7 131 aa9.52□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Sgk2Q9QZS5 367 aa9.52□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Galk1Q9R0N0 392 aa9.52□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Cd300ld2A2A7W0 305 aa9.52□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Zfp964B2RR88 472 aa9.52□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Kcnk1O08581 336 aa9.52□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Rab23P35288 237 aa9.52□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Ptpn2Q06180 406 aa9.52□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Gpat2Q14DK4 801 aa9.52□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Sel1l2Q3V172 688 aa9.52□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Prss36Q5K2P8 849 aa9.52□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Nr1d2Q60674 576 aa9.52□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Itga7Q61738 1179 aa9.52□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 CilpQ66K08 1184 aa9.52□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Il20raQ6PHB0 546 aa9.52□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Ptx4Q6RUU0 478 aa9.52□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Tas2r39Q7TQA5 319 aa9.52□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Adamtsl4Q80T21 1036 aa9.52□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Phtf2Q8CB19 747 aa9.52□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Thap1Q8CHW1 210 aa9.52□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Ly6g5cQ8K1T5 149 aa9.52□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Utp4Q8R2N2 686 aaKnown RBP9.52□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 NrmQ8VC65 262 aa9.52□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Lmcd1Q8VEE1 365 aa9.52□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Slc8b1Q925Q3 585 aa9.52□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 GhdcQ99J23 532 aa9.52□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Pdzd3Q99MJ6 498 aa9.52□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 NarfQ9CYQ7 462 aa9.52□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Q9DAD0 168 aa9.52□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Smg9Q9DB90 520 aa9.52□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Armc8Q9DBR3 673 aa9.52□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Xylt2Q9EPL0 865 aa9.52□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 EefsecQ9JHW4 583 aa9.52□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Tgm1Q9JLF6 815 aa9.52□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Vwa8Q8CC88 1905 aa9.51□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Akap17bA2A3V1 959 aa9.51□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Izumo4D3Z690 227 aa9.51□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Gm21897J3KMP5 500 aa9.51□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Gm21750L7N228 499 aa9.51□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Cdk2ap1O35207 114 aa9.51□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Arl6O88848 186 aa9.51□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Ptpn6P29351 595 aaKnown RBP9.51□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Cdc25bP30306 576 aa9.51□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Irf7P70434 457 aa9.51□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 PrkczQ02956 592 aa9.51□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Xrra1Q3U3V8 786 aa9.51□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Ube2r2Q6ZWZ2 238 aa9.51□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Q8BH50 245 aa9.51□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Smad3Q8BUN5 425 aa9.51□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Prmt5Q8CIG8 637 aa9.51□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Gprc6aQ8K4Z6 928 aa9.51□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Vwa1Q8R2Z5 415 aa9.51□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Asb6Q91ZU1 418 aa9.51□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 NgrnQ99KS2 293 aaKnown RBP9.51□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Metap1dQ9CPW9 335 aa9.51□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 PglsQ9CQ60 257 aa9.51□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 MispQ9D279 648 aa9.51□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Rad18Q9QXK2 509 aaKnown RBP9.51□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 A0A286YDU1 74 aa9.51□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Pramef25A2ASI9 494 aa9.51□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Fam71f2B2RXB0 297 aa9.51□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Olfr543E9PWI5 336 aa9.51□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 A530032D15RikE9Q422 215 aa9.51□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Gm7535F7CXE4 302 aa9.51□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Olfr1121L7MTT1 314 aa9.51□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Erp29P57759 262 aaKnown RBP9.51□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Itgb8Q0VBD0 767 aa9.51□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Bcl2l1Q64373 233 aa9.51□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Pih1d2Q8CHR9 315 aa9.51□□□□□ -0.89
Ccdc40-202ENSMUST00000053440 Ndufs1Q91VD9 727 aaKnown RBP9.51□□□□□ -0.89
Retrieved 100 of 22,080 RNA–protein pairs in 19.1 ms