RNA–Protein interactions for RNA: ENSMUST00000014065.15

Clip3-201, Transcript of CAP-Gly domain-containing linker protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Clip3, Length 3,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clip3-201ENSMUST00000014065 Cd9P40240 226 aa10.04□□□□□ -0.8
Clip3-201ENSMUST00000014065 CtskP55097 329 aa10.04□□□□□ -0.8
Clip3-201ENSMUST00000014065 MagixQ4KL35 324 aa10.04□□□□□ -0.8
Clip3-201ENSMUST00000014065 Gkn2Q9CQS6 184 aa10.04□□□□□ -0.8
Clip3-201ENSMUST00000014065 Atp6ap2Q9CYN9 350 aa10.04□□□□□ -0.8
Clip3-201ENSMUST00000014065 Uba7Q9DBK7 977 aa10.04□□□□□ -0.8
Clip3-201ENSMUST00000014065 Yipf5Q9EQQ2 257 aa10.04□□□□□ -0.8
Clip3-201ENSMUST00000014065 Tsc22d3Q9Z2S7 137 aa10.04□□□□□ -0.8
Clip3-201ENSMUST00000014065 PtprfA2A8L5 1898 aa10.04□□□□□ -0.8
Clip3-201ENSMUST00000014065 Akap17bA2A3V1 959 aa10.04□□□□□ -0.8
Clip3-201ENSMUST00000014065 Fbxw9F8VPX2 458 aa10.04□□□□□ -0.8
Clip3-201ENSMUST00000014065 Vmn2r3H3BJ88 915 aa10.04□□□□□ -0.8
Clip3-201ENSMUST00000014065 Vmn2r8L7N472 848 aa10.04□□□□□ -0.8
Clip3-201ENSMUST00000014065 Znf703P0CL69 594 aa10.04□□□□□ -0.8
Clip3-201ENSMUST00000014065 Ctla2aP12399 137 aa10.04□□□□□ -0.8
Clip3-201ENSMUST00000014065 Cma1P21844 247 aa10.04□□□□□ -0.8
Clip3-201ENSMUST00000014065 Cd247P24161 164 aa10.04□□□□□ -0.8
Clip3-201ENSMUST00000014065 Rps3P62908 243 aaKnown RBP10.04□□□□□ -0.8
Clip3-201ENSMUST00000014065 FhP97807 507 aa10.04□□□□□ -0.8
Clip3-201ENSMUST00000014065 Cmpk2Q3U5Q7 447 aa10.04□□□□□ -0.8
Clip3-201ENSMUST00000014065 Q3U7U4 132 aa10.04□□□□□ -0.8
Clip3-201ENSMUST00000014065 A630001G21RikQ3UTB2 229 aa10.04□□□□□ -0.8
Clip3-201ENSMUST00000014065 Cdh12Q5RJH3 794 aa10.04□□□□□ -0.8
Clip3-201ENSMUST00000014065 Bhlhb9Q6PB60 539 aa10.04□□□□□ -0.8
Clip3-201ENSMUST00000014065 PdhxQ8BKZ9 501 aa10.04□□□□□ -0.8
Clip3-201ENSMUST00000014065 Gm4922Q8C0N0 497 aa10.04□□□□□ -0.8
Clip3-201ENSMUST00000014065 Gpr37l1Q99JG2 481 aa10.04□□□□□ -0.8
Clip3-201ENSMUST00000014065 Zswim7Q9CWQ2 152 aa10.04□□□□□ -0.8
Clip3-201ENSMUST00000014065 Ddx28Q9CWT6 540 aaKnown RBP10.04□□□□□ -0.8
Clip3-201ENSMUST00000014065 Gtf2h2Q9JIB4 396 aa10.04□□□□□ -0.8
Clip3-201ENSMUST00000014065 Vnn3Q9QZ25 500 aa10.04□□□□□ -0.8
Clip3-201ENSMUST00000014065 Tcf7l1Q9Z1J1 584 aa10.04□□□□□ -0.8
Clip3-201ENSMUST00000014065 Gm5565A0A0G2JGB2 317 aa10.03□□□□□ -0.8
Clip3-201ENSMUST00000014065 Gm35911A0A1D5RLS7 214 aa10.03□□□□□ -0.8
Clip3-201ENSMUST00000014065 Cd300ld2A2A7W0 305 aa10.03□□□□□ -0.8
Clip3-201ENSMUST00000014065 Tmem236A2ARJ3 344 aa10.03□□□□□ -0.8
Clip3-201ENSMUST00000014065 Iqca1lA6H690 825 aa10.03□□□□□ -0.8
Clip3-201ENSMUST00000014065 Rdh8D3Z6W3 317 aa10.03□□□□□ -0.8
Clip3-201ENSMUST00000014065 Gm10639E9Q6L7 222 aa10.03□□□□□ -0.8
Clip3-201ENSMUST00000014065 Il20rbE9Q9A6 308 aa10.03□□□□□ -0.8
Clip3-201ENSMUST00000014065 Alkal1J3QPP8 127 aa10.03□□□□□ -0.8
Clip3-201ENSMUST00000014065 Gm5152L7N200 190 aa10.03□□□□□ -0.8
Clip3-201ENSMUST00000014065 ItgamP05555 1153 aa10.03□□□□□ -0.8
Clip3-201ENSMUST00000014065 JundP15066 341 aa10.03□□□□□ -0.8
Clip3-201ENSMUST00000014065 Hmga1P17095 107 aaKnown RBP10.03□□□□□ -0.8
Clip3-201ENSMUST00000014065 Cd19P25918 547 aa10.03□□□□□ -0.8
Clip3-201ENSMUST00000014065 Alox12P39655 663 aa10.03□□□□□ -0.8
Clip3-201ENSMUST00000014065 InhbbQ04999 411 aa10.03□□□□□ -0.8
Clip3-201ENSMUST00000014065 Armc5Q5EBP3 926 aa10.03□□□□□ -0.8
Clip3-201ENSMUST00000014065 Usp17laQ61068 526 aa10.03□□□□□ -0.8
Clip3-201ENSMUST00000014065 Hesx1Q61658 185 aa10.03□□□□□ -0.8
Clip3-201ENSMUST00000014065 Olig3Q6PFG8 273 aa10.03□□□□□ -0.8
Clip3-201ENSMUST00000014065 Atl1Q8BH66 558 aa10.03□□□□□ -0.8
Clip3-201ENSMUST00000014065 Palm2Q8BR92 376 aa10.03□□□□□ -0.8
Clip3-201ENSMUST00000014065 Tmem125Q8CHQ6 216 aa10.03□□□□□ -0.8
Clip3-201ENSMUST00000014065 KptnQ8VCX6 430 aa10.03□□□□□ -0.8
Clip3-201ENSMUST00000014065 Olfr1353Q8VGU8 309 aa10.03□□□□□ -0.8
Clip3-201ENSMUST00000014065 Nipal2Q91WC7 383 aa10.03□□□□□ -0.8
Clip3-201ENSMUST00000014065 GhdcQ99J23 532 aa10.03□□□□□ -0.8
Clip3-201ENSMUST00000014065 Trim12aQ99PQ1 284 aa10.03□□□□□ -0.8
Clip3-201ENSMUST00000014065 Metap1dQ9CPW9 335 aa10.03□□□□□ -0.8
Clip3-201ENSMUST00000014065 Uqcc2Q9CQY6 136 aa10.03□□□□□ -0.8
Clip3-201ENSMUST00000014065 Ovca2Q9D7E3 225 aa10.03□□□□□ -0.8
Clip3-201ENSMUST00000014065 Cib4Q9D9N5 185 aa10.03□□□□□ -0.8
Clip3-201ENSMUST00000014065 CenpkQ9ESN5 271 aa10.03□□□□□ -0.8
Clip3-201ENSMUST00000014065 Serpini2Q9JK88 405 aa10.03□□□□□ -0.8
Clip3-201ENSMUST00000014065 Celf2Q9Z0H4 508 aaKnown RBP10.03□□□□□ -0.8
Clip3-201ENSMUST00000014065 CroccQ8CJ40 2009 aa10.03□□□□□ -0.8
Clip3-201ENSMUST00000014065 Gm10718D3Z1I7 227 aa10.03□□□□□ -0.8
Clip3-201ENSMUST00000014065 Gm5415E9PXF3 478 aa10.03□□□□□ -0.8
Clip3-201ENSMUST00000014065 Bard1O70445 765 aa10.03□□□□□ -0.8
Clip3-201ENSMUST00000014065 Dnaja1P63037 397 aaKnown RBP10.03□□□□□ -0.8
Clip3-201ENSMUST00000014065 Rpl10lP86048 214 aaKnown RBP10.03□□□□□ -0.8
Clip3-201ENSMUST00000014065 Ube2r2Q6ZWZ2 238 aa10.03□□□□□ -0.8
Clip3-201ENSMUST00000014065 Olfr1355Q7TQU9 310 aa10.03□□□□□ -0.8
Clip3-201ENSMUST00000014065 Hus1Q8BQY8 280 aa10.03□□□□□ -0.8
Clip3-201ENSMUST00000014065 Ctdsp2Q8BX07 270 aa10.03□□□□□ -0.8
Clip3-201ENSMUST00000014065 Arel1Q8CHG5 823 aa10.03□□□□□ -0.8
Clip3-201ENSMUST00000014065 BtdQ8CIF4 520 aa10.03□□□□□ -0.8
Clip3-201ENSMUST00000014065 Vmn1r214Q8R279 367 aa10.03□□□□□ -0.8
Clip3-201ENSMUST00000014065 Neto1Q8R4I7 533 aa10.03□□□□□ -0.8
Clip3-201ENSMUST00000014065 Olfr1208Q8VG47 308 aa10.03□□□□□ -0.8
Clip3-201ENSMUST00000014065 Olfr791Q8VGJ0 312 aa10.03□□□□□ -0.8
Clip3-201ENSMUST00000014065 Slc2a10Q8VHD6 536 aa10.03□□□□□ -0.8
Clip3-201ENSMUST00000014065 Mto1Q923Z3 669 aa10.03□□□□□ -0.8
Clip3-201ENSMUST00000014065 TrabdQ99JY4 376 aa10.03□□□□□ -0.8
Clip3-201ENSMUST00000014065 Ly6kQ9CWP4 154 aa10.03□□□□□ -0.8
Clip3-201ENSMUST00000014065 Hspa12bQ9CZJ2 685 aa10.03□□□□□ -0.8
Clip3-201ENSMUST00000014065 Q9D937 123 aaKnown RBP10.03□□□□□ -0.8
Clip3-201ENSMUST00000014065 Ern1Q9EQY0 977 aa10.03□□□□□ -0.8
Clip3-201ENSMUST00000014065 Ehd3Q9QXY6 535 aa10.03□□□□□ -0.8
Clip3-201ENSMUST00000014065 Cldn8Q9Z260 225 aa10.03□□□□□ -0.8
Clip3-201ENSMUST00000014065 Htatip2Q9Z2G9 242 aa10.03□□□□□ -0.8
Clip3-201ENSMUST00000014065 Sbf1Q6ZPE2 1867 aa10.03□□□□□ -0.8
Clip3-201ENSMUST00000014065 Gm10608E9PZ13 166 aa10.02□□□□□ -0.8
Clip3-201ENSMUST00000014065 Kcnk1O08581 336 aa10.02□□□□□ -0.8
Clip3-201ENSMUST00000014065 Bcl7cO08664 217 aa10.02□□□□□ -0.8
Clip3-201ENSMUST00000014065 PbsnO08976 174 aa10.02□□□□□ -0.8
Clip3-201ENSMUST00000014065 Anxa3O35639 323 aa10.02□□□□□ -0.8
Clip3-201ENSMUST00000014065 Stk16O88697 305 aa10.02□□□□□ -0.8
Retrieved 100 of 22,080 RNA–protein pairs in 21.3 ms