RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 ADNP2Q6IQ32 1131 aa20.82■□□□□ 0.92
CLN6-224ENST00000638076 OR52E4Q8NGH9 312 aa20.82■□□□□ 0.92
CLN6-224ENST00000638076 SMARCD2Q92925 531 aa20.82■□□□□ 0.92
CLN6-224ENST00000638076 FAM129BQ96TA1 746 aa20.82■□□□□ 0.92
CLN6-224ENST00000638076 REXO4Q9GZR2 422 aaKnown RBP20.82■□□□□ 0.92
CLN6-224ENST00000638076 MTIF3Q9H2K0 278 aaKnown RBP20.82■□□□□ 0.92
CLN6-224ENST00000638076 PRM3Q9NNZ6 103 aa20.82■□□□□ 0.92
CLN6-224ENST00000638076 CD320Q9NPF0 282 aa20.82■□□□□ 0.92
CLN6-224ENST00000638076 VILLO15195 856 aa20.82■□□□□ 0.92
CLN6-224ENST00000638076 PRKD3O94806 890 aa20.82■□□□□ 0.92
CLN6-224ENST00000638076 SEC24DO94855 1032 aaPredicted RBP20.82■□□□□ 0.92
CLN6-224ENST00000638076 MYCLP1P12525 358 aaPredicted RBP20.82■□□□□ 0.92
CLN6-224ENST00000638076 CAPGP40121 348 aa20.82■□□□□ 0.92
CLN6-224ENST00000638076 ACSM2AQ08AH3 577 aa20.82■□□□□ 0.92
CLN6-224ENST00000638076 PON2Q15165 354 aa20.82■□□□□ 0.92
CLN6-224ENST00000638076 UGT8Q16880 541 aa20.82■□□□□ 0.92
CLN6-224ENST00000638076 ACSM2BQ68CK6 577 aa20.82■□□□□ 0.92
CLN6-224ENST00000638076 TTC33Q6PID6 262 aaPredicted RBP20.82■□□□□ 0.92
CLN6-224ENST00000638076 MSANTD1Q6ZTZ1 278 aa20.82■□□□□ 0.92
CLN6-224ENST00000638076 GPR149Q86SP6 731 aa20.82■□□□□ 0.92
CLN6-224ENST00000638076 ZNF786Q8N393 782 aa20.82■□□□□ 0.92
CLN6-224ENST00000638076 CDC26Q8NHZ8 85 aa20.82■□□□□ 0.92
CLN6-224ENST00000638076 NELL1Q92832 810 aa20.82■□□□□ 0.92
CLN6-224ENST00000638076 FGF13Q92913 245 aa20.82■□□□□ 0.92
CLN6-224ENST00000638076 TRIM4Q9C037 500 aa20.82■□□□□ 0.92
CLN6-224ENST00000638076 SOX17Q9H6I2 414 aaPredicted RBP20.82■□□□□ 0.92
CLN6-224ENST00000638076 DCAF13Q9NV06 445 aaKnown RBP20.82■□□□□ 0.92
CLN6-224ENST00000638076 UTS2RQ9UKP6 389 aa20.82■□□□□ 0.92
CLN6-224ENST00000638076 RUVBL1Q9Y265 456 aaKnown RBP20.82■□□□□ 0.92
CLN6-224ENST00000638076 ALPK3Q96L96 1907 aa20.81■□□□□ 0.92
CLN6-224ENST00000638076 MAGEB17A8MXT2 336 aa20.81■□□□□ 0.92
CLN6-224ENST00000638076 SH3BGRLO75368 114 aa20.81■□□□□ 0.92
CLN6-224ENST00000638076 PCDH1Q08174 1060 aa20.81■□□□□ 0.92
CLN6-224ENST00000638076 EIF4HQ15056 248 aaKnown RBP20.81■□□□□ 0.92
CLN6-224ENST00000638076 DPY19L1Q2PZI1 675 aa20.81■□□□□ 0.92
CLN6-224ENST00000638076 FAM109BQ6ICB4 259 aaPredicted RBP20.81■□□□□ 0.92
CLN6-224ENST00000638076 DOK6Q6PKX4 331 aa20.81■□□□□ 0.92
CLN6-224ENST00000638076 ZFP28Q8NHY6 868 aa20.81■□□□□ 0.92
CLN6-224ENST00000638076 HM13Q8TCT9 377 aa20.81■□□□□ 0.92
CLN6-224ENST00000638076 NETO1Q8TDF5 533 aa20.81■□□□□ 0.92
CLN6-224ENST00000638076 ZNF480Q8WV37 535 aa20.81■□□□□ 0.92
CLN6-224ENST00000638076 NEIL2Q969S2 332 aa20.81■□□□□ 0.92
CLN6-224ENST00000638076 NMD3Q96D46 503 aaKnown RBP20.81■□□□□ 0.92
CLN6-224ENST00000638076 PPP1R16AQ96I34 528 aa20.81■□□□□ 0.92
CLN6-224ENST00000638076 RBM38Q9H0Z9 239 aaKnown RBP20.81■□□□□ 0.92
CLN6-224ENST00000638076 THG1LQ9NWX6 298 aaKnown RBP20.81■□□□□ 0.92
CLN6-224ENST00000638076 PCDHGA11Q9Y5H2 935 aa20.81■□□□□ 0.92
CLN6-224ENST00000638076 MAGED1Q9Y5V3 778 aaPredicted RBP20.81■□□□□ 0.92
CLN6-224ENST00000638076 COMMD3-BMI1R4GMX3 469 aa20.81■□□□□ 0.92
CLN6-224ENST00000638076 CCDC160A6NGH7 325 aa20.81■□□□□ 0.92
CLN6-224ENST00000638076 ETHE1O95571 254 aa20.81■□□□□ 0.92
CLN6-224ENST00000638076 RETP07949 1114 aa20.81■□□□□ 0.92
CLN6-224ENST00000638076 ARSFP54793 590 aa20.81■□□□□ 0.92
CLN6-224ENST00000638076 SRSF11Q05519 484 aaKnown RBP20.81■□□□□ 0.92
CLN6-224ENST00000638076 ABHD18Q0P651 414 aa20.81■□□□□ 0.92
CLN6-224ENST00000638076 SLC14A1Q13336 389 aa20.81■□□□□ 0.92
CLN6-224ENST00000638076 ZNF765Q7L2R6 523 aa20.81■□□□□ 0.92
CLN6-224ENST00000638076 SYTL1Q8IYJ3 562 aa20.81■□□□□ 0.92
CLN6-224ENST00000638076 OFCC1Q8IZS5 231 aa20.81■□□□□ 0.92
CLN6-224ENST00000638076 TMEM245Q9H330 911 aa20.81■□□□□ 0.92
CLN6-224ENST00000638076 BRF2Q9HAW0 419 aa20.81■□□□□ 0.92
CLN6-224ENST00000638076 ZDHHC4Q9NPG8 344 aa20.81■□□□□ 0.92
CLN6-224ENST00000638076 ATXN10Q9UBB4 475 aa20.81■□□□□ 0.92
CLN6-224ENST00000638076 KCNE2Q9Y6J6 123 aa20.81■□□□□ 0.92
CLN6-224ENST00000638076 LRRK1Q38SD2 2015 aa20.8■□□□□ 0.92
CLN6-224ENST00000638076 PRMT3O60678 531 aa20.8■□□□□ 0.92
CLN6-224ENST00000638076 CST1P01037 141 aa20.8■□□□□ 0.92
CLN6-224ENST00000638076 HSD3B1P14060 373 aa20.8■□□□□ 0.92
CLN6-224ENST00000638076 COX7A2P14406 83 aa20.8■□□□□ 0.92
CLN6-224ENST00000638076 HSD3B2P26439 372 aa20.8■□□□□ 0.92
CLN6-224ENST00000638076 CDH15P55291 814 aa20.8■□□□□ 0.92
CLN6-224ENST00000638076 DUOXA1Q1HG43 343 aa20.8■□□□□ 0.92
CLN6-224ENST00000638076 MMAAQ8IVH4 418 aaKnown RBP20.8■□□□□ 0.92
CLN6-224ENST00000638076 OR7G3Q8NG95 312 aa20.8■□□□□ 0.92
CLN6-224ENST00000638076 C11orf24Q96F05 449 aaPredicted RBP20.8■□□□□ 0.92
CLN6-224ENST00000638076 PANX1Q96RD7 426 aa20.8■□□□□ 0.92
CLN6-224ENST00000638076 CERS4Q9HA82 394 aa20.8■□□□□ 0.92
CLN6-224ENST00000638076 DYRK4Q9NR20 520 aa20.8■□□□□ 0.92
CLN6-224ENST00000638076 FPGTO14772 594 aa20.79■□□□□ 0.92
CLN6-224ENST00000638076 SERPINA1P01009 418 aa20.79■□□□□ 0.92
CLN6-224ENST00000638076 ALDH3A2P51648 485 aa20.79■□□□□ 0.92
CLN6-224ENST00000638076 TBPL1P62380 186 aa20.79■□□□□ 0.92
CLN6-224ENST00000638076 TSTA3Q13630 321 aaPredicted RBP20.79■□□□□ 0.92
CLN6-224ENST00000638076 ZNF551Q7Z340 670 aaPredicted RBP20.79■□□□□ 0.92
CLN6-224ENST00000638076 TMPRSS11BQ86T26 416 aa20.79■□□□□ 0.92
CLN6-224ENST00000638076 FBXO15Q8NCQ5 510 aaPredicted RBP20.79■□□□□ 0.92
CLN6-224ENST00000638076 HUS1BQ8NHY5 278 aa20.79■□□□□ 0.92
CLN6-224ENST00000638076 REXO5Q96IC2 774 aaKnown RBP20.79■□□□□ 0.92
CLN6-224ENST00000638076 TRIM39Q9HCM9 518 aa20.79■□□□□ 0.92
CLN6-224ENST00000638076 DNAJB9Q9UBS3 223 aa20.79■□□□□ 0.92
CLN6-224ENST00000638076 ANTXRLA6NF34 631 aa20.79■□□□□ 0.92
CLN6-224ENST00000638076 MYO1DO94832 1006 aa20.79■□□□□ 0.92
CLN6-224ENST00000638076 WNT3P56703 355 aa20.79■□□□□ 0.92
CLN6-224ENST00000638076 DPTQ07507 201 aa20.79■□□□□ 0.92
CLN6-224ENST00000638076 GTF2H3Q13889 308 aa20.79■□□□□ 0.92
CLN6-224ENST00000638076 KCTD21Q4G0X4 260 aa20.79■□□□□ 0.92
CLN6-224ENST00000638076 XKR5Q6UX68 686 aa20.79■□□□□ 0.92
CLN6-224ENST00000638076 GET4Q7L5D6 327 aaPredicted RBP20.79■□□□□ 0.92
CLN6-224ENST00000638076 TRMT11Q7Z4G4 463 aaKnown RBP20.79■□□□□ 0.92
CLN6-224ENST00000638076 STK32CQ86UX6 486 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms