RNA–Protein interactions for RNA: ENST00000636964.1

CLN6-217, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 3,335 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-217ENST00000636964 PCYT1AP49585 367 aa11.18□□□□□ -0.62
CLN6-217ENST00000636964 DCDC1P59894 354 aa11.18□□□□□ -0.62
CLN6-217ENST00000636964 TRAF3Q13114 568 aa11.18□□□□□ -0.62
CLN6-217ENST00000636964 RAB39AQ14964 217 aa11.18□□□□□ -0.62
CLN6-217ENST00000636964 ABRAXAS2Q15018 415 aa11.18□□□□□ -0.62
CLN6-217ENST00000636964 TMEM220Q6QAJ8 160 aa11.18□□□□□ -0.62
CLN6-217ENST00000636964 Q6ZSR9 355 aa11.18□□□□□ -0.62
CLN6-217ENST00000636964 HM13Q8TCT9 377 aa11.18□□□□□ -0.62
CLN6-217ENST00000636964 THAP11Q96EK4 314 aa11.18□□□□□ -0.62
CLN6-217ENST00000636964 TEX37Q96LM6 180 aa11.18□□□□□ -0.62
CLN6-217ENST00000636964 ALPK1Q96QP1 1244 aa11.18□□□□□ -0.62
CLN6-217ENST00000636964 P2RY13Q9BPV8 354 aa11.18□□□□□ -0.62
CLN6-217ENST00000636964 OSBPL11Q9BXB4 747 aa11.18□□□□□ -0.62
CLN6-217ENST00000636964 ATG10Q9H0Y0 220 aa11.18□□□□□ -0.62
CLN6-217ENST00000636964 CXorf21Q9HAI6 301 aa11.18□□□□□ -0.62
CLN6-217ENST00000636964 NEK6Q9HC98 313 aa11.18□□□□□ -0.62
CLN6-217ENST00000636964 PRSS16Q9NQE7 514 aa11.18□□□□□ -0.62
CLN6-217ENST00000636964 ADA2Q9NZK5 511 aa11.18□□□□□ -0.62
CLN6-217ENST00000636964 GMPR2Q9P2T1 348 aaKnown RBP11.18□□□□□ -0.62
CLN6-217ENST00000636964 ERGIC3Q9Y282 383 aa11.18□□□□□ -0.62
CLN6-217ENST00000636964 LOC730098B7Z3J9 87 aa11.18□□□□□ -0.62
CLN6-217ENST00000636964 ZNF701M0R085 212 aaPredicted RBP11.18□□□□□ -0.62
CLN6-217ENST00000636964 ANXA5P08758 320 aa11.18□□□□□ -0.62
CLN6-217ENST00000636964 C6P13671 934 aa11.18□□□□□ -0.62
CLN6-217ENST00000636964 IL32P24001 234 aa11.18□□□□□ -0.62
CLN6-217ENST00000636964 ITGB7P26010 798 aa11.18□□□□□ -0.62
CLN6-217ENST00000636964 DCKP27707 260 aa11.18□□□□□ -0.62
CLN6-217ENST00000636964 VASPP50552 380 aaPredicted RBP11.18□□□□□ -0.62
CLN6-217ENST00000636964 SEC13P55735 322 aa11.18□□□□□ -0.62
CLN6-217ENST00000636964 EIF4HQ15056 248 aaKnown RBP11.18□□□□□ -0.62
CLN6-217ENST00000636964 KCNJ8Q15842 424 aa11.18□□□□□ -0.62
CLN6-217ENST00000636964 CHPFQ8IZ52 775 aa11.18□□□□□ -0.62
CLN6-217ENST00000636964 CADM3Q8N126 398 aa11.18□□□□□ -0.62
CLN6-217ENST00000636964 PCYOX1LQ8NBM8 494 aa11.18□□□□□ -0.62
CLN6-217ENST00000636964 LRCH3Q96II8 777 aa11.18□□□□□ -0.62
CLN6-217ENST00000636964 SMOXQ9NWM0 555 aa11.18□□□□□ -0.62
CLN6-217ENST00000636964 CLEC1BQ9P126 229 aa11.18□□□□□ -0.62
CLN6-217ENST00000636964 BRWD1Q9NSI6 2320 aa11.17□□□□□ -0.62
CLN6-217ENST00000636964 ZSCAN5BA6NJL1 495 aa11.17□□□□□ -0.62
CLN6-217ENST00000636964 H0YC42 278 aa11.17□□□□□ -0.62
CLN6-217ENST00000636964 STK16O75716 305 aa11.17□□□□□ -0.62
CLN6-217ENST00000636964 OTCP00480 354 aa11.17□□□□□ -0.62
CLN6-217ENST00000636964 CBSLP0DN79 551 aa11.17□□□□□ -0.62
CLN6-217ENST00000636964 LAMP2P13473 410 aa11.17□□□□□ -0.62
CLN6-217ENST00000636964 CBSP35520 551 aa11.17□□□□□ -0.62
CLN6-217ENST00000636964 TPD52P55327 224 aaPredicted RBP11.17□□□□□ -0.62
CLN6-217ENST00000636964 RAB15P59190 212 aa11.17□□□□□ -0.62
CLN6-217ENST00000636964 STX5Q13190 355 aa11.17□□□□□ -0.62
CLN6-217ENST00000636964 RAET1GQ6H3X3 334 aa11.17□□□□□ -0.62
CLN6-217ENST00000636964 IGFN1Q86VF2 1251 aa11.17□□□□□ -0.62
CLN6-217ENST00000636964 ZC3H7AQ8IWR0 971 aaKnown RBP11.17□□□□□ -0.62
CLN6-217ENST00000636964 PGAM4Q8N0Y7 254 aa11.17□□□□□ -0.62
CLN6-217ENST00000636964 MIER2Q8N344 545 aa11.17□□□□□ -0.62
CLN6-217ENST00000636964 SFRP1Q8N474 314 aa11.17□□□□□ -0.62
CLN6-217ENST00000636964 AADATQ8N5Z0 425 aa11.17□□□□□ -0.62
CLN6-217ENST00000636964 FNDC5Q8NAU1 212 aa11.17□□□□□ -0.62
CLN6-217ENST00000636964 TMIEQ8NEW7 156 aa11.17□□□□□ -0.62
CLN6-217ENST00000636964 ASB11Q8WXH4 323 aa11.17□□□□□ -0.62
CLN6-217ENST00000636964 TFAP2CQ92754 450 aa11.17□□□□□ -0.62
CLN6-217ENST00000636964 DTD2Q96FN9 168 aa11.17□□□□□ -0.62
CLN6-217ENST00000636964 COQ10AQ96MF6 247 aa11.17□□□□□ -0.62
CLN6-217ENST00000636964 COQ7Q99807 217 aa11.17□□□□□ -0.62
CLN6-217ENST00000636964 OBP2AQ9NY56 170 aa11.17□□□□□ -0.62
CLN6-217ENST00000636964 KLQ9UEF7 1012 aa11.17□□□□□ -0.62
CLN6-217ENST00000636964 F5P12259 2224 aa11.17□□□□□ -0.62
CLN6-217ENST00000636964 MRASO14807 208 aa11.17□□□□□ -0.62
CLN6-217ENST00000636964 NRP2O60462 931 aa11.17□□□□□ -0.62
CLN6-217ENST00000636964 SYNCRIPO60506 623 aaKnown RBP11.17□□□□□ -0.62
CLN6-217ENST00000636964 PAPLNO95428 1278 aa11.17□□□□□ -0.62
CLN6-217ENST00000636964 CLIC3O95833 236 aa11.17□□□□□ -0.62
CLN6-217ENST00000636964 HIST1H2AGP0C0S8 130 aaPredicted RBP11.17□□□□□ -0.62
CLN6-217ENST00000636964 HIST1H2ADP20671 130 aa11.17□□□□□ -0.62
CLN6-217ENST00000636964 ME2P23368 584 aa11.17□□□□□ -0.62
CLN6-217ENST00000636964 PDHA2P29803 388 aa11.17□□□□□ -0.62
CLN6-217ENST00000636964 KRT20P35900 424 aa11.17□□□□□ -0.62
CLN6-217ENST00000636964 POLR2IP36954 125 aaKnown RBP11.17□□□□□ -0.62
CLN6-217ENST00000636964 CNTN1Q12860 1018 aa11.17□□□□□ -0.62
CLN6-217ENST00000636964 SF3B4Q15427 424 aaKnown RBP eCLIP11.17□□□□□ -0.62
CLN6-217ENST00000636964 PLA2G4EQ3MJ16 856 aa11.17□□□□□ -0.62
CLN6-217ENST00000636964 CES5AQ6NT32 575 aa11.17□□□□□ -0.62
CLN6-217ENST00000636964 BTN2A1Q7KYR7 527 aa11.17□□□□□ -0.62
CLN6-217ENST00000636964 RETREG3Q86VR2 466 aa11.17□□□□□ -0.62
CLN6-217ENST00000636964 SNX29P2Q8IUI4 249 aa11.17□□□□□ -0.62
CLN6-217ENST00000636964 HIST1H2AHQ96KK5 128 aa11.17□□□□□ -0.62
CLN6-217ENST00000636964 EGLN2Q96KS0 407 aa11.17□□□□□ -0.62
CLN6-217ENST00000636964 HIST1H2AJQ99878 128 aa11.17□□□□□ -0.62
CLN6-217ENST00000636964 H2AFJQ9BTM1 129 aa11.17□□□□□ -0.62
CLN6-217ENST00000636964 NUSAP1Q9BXS6 441 aaKnown RBP11.17□□□□□ -0.62
CLN6-217ENST00000636964 OR2AG1Q9H205 316 aa11.17□□□□□ -0.62
CLN6-217ENST00000636964 E7ENX8 843 aa11.17□□□□□ -0.62
CLN6-217ENST00000636964 AREL1O15033 823 aa11.17□□□□□ -0.62
CLN6-217ENST00000636964 AKAP10O43572 662 aa11.17□□□□□ -0.62
CLN6-217ENST00000636964 INMTO95050 263 aa11.17□□□□□ -0.62
CLN6-217ENST00000636964 EPB42P16452 691 aa11.17□□□□□ -0.62
CLN6-217ENST00000636964 ITPKAP23677 461 aa11.17□□□□□ -0.62
CLN6-217ENST00000636964 P2RY2P41231 377 aa11.17□□□□□ -0.62
CLN6-217ENST00000636964 GPR1P46091 355 aa11.17□□□□□ -0.62
CLN6-217ENST00000636964 PSME3P61289 254 aa11.17□□□□□ -0.62
CLN6-217ENST00000636964 UFM1P61960 85 aa11.17□□□□□ -0.62
CLN6-217ENST00000636964 CPSF6Q16630 551 aaKnown RBP eCLIP11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms