RNA–Protein interactions for RNA: ENST00000630925.1

SDCBP-213, Transcript of syndecan binding protein, humanhuman

TSL 5 BASIC

Gene SDCBP, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-213ENST00000630925 HHATLQ9HCP6 504 aa4.71□□□□□ -1.66
SDCBP-213ENST00000630925 THAP1Q9NVV9 213 aa4.71□□□□□ -1.66
SDCBP-213ENST00000630925 MS4A12Q9NXJ0 267 aa4.71□□□□□ -1.66
SDCBP-213ENST00000630925 RBAKQ9NYW8 714 aaPredicted RBP4.71□□□□□ -1.66
SDCBP-213ENST00000630925 PCDHA12Q9UN75 941 aa4.71□□□□□ -1.66
SDCBP-213ENST00000630925 RAXQ9Y2V3 346 aa4.71□□□□□ -1.66
SDCBP-213ENST00000630925 TMEM184BQ9Y519 407 aaPredicted RBP4.71□□□□□ -1.66
SDCBP-213ENST00000630925 CDY1Q9Y6F8 540 aa4.71□□□□□ -1.66
SDCBP-213ENST00000630925 PRAG1Q86YV5 1406 aa4.71□□□□□ -1.66
SDCBP-213ENST00000630925 DUOX2Q9NRD8 1548 aa4.71□□□□□ -1.66
SDCBP-213ENST00000630925 A0A1W2PR48 441 aa4.7□□□□□ -1.66
SDCBP-213ENST00000630925 BCLAF3A2AJT9 711 aaKnown RBP4.7□□□□□ -1.66
SDCBP-213ENST00000630925 MBLAC1A4D2B0 266 aaPredicted RBP4.7□□□□□ -1.66
SDCBP-213ENST00000630925 PDZK1P1A8MUH7 402 aa4.7□□□□□ -1.66
SDCBP-213ENST00000630925 KIAA1324LA8MWY0 1029 aaPredicted RBP4.7□□□□□ -1.66
SDCBP-213ENST00000630925 WASH3PC4AMC7 463 aa4.7□□□□□ -1.66
SDCBP-213ENST00000630925 CTDSPLO15194 276 aa4.7□□□□□ -1.66
SDCBP-213ENST00000630925 SEC14L5O43304 696 aa4.7□□□□□ -1.66
SDCBP-213ENST00000630925 CHMP2AO43633 222 aa4.7□□□□□ -1.66
SDCBP-213ENST00000630925 SCN2BO60939 215 aa4.7□□□□□ -1.66
SDCBP-213ENST00000630925 ZFPL1O95159 310 aa4.7□□□□□ -1.66
SDCBP-213ENST00000630925 ZNF205O95201 554 aa4.7□□□□□ -1.66
SDCBP-213ENST00000630925 MPIG6BO95866 241 aa4.7□□□□□ -1.66
SDCBP-213ENST00000630925 ADAP00813 363 aa4.7□□□□□ -1.66
SDCBP-213ENST00000630925 LYNP07948 512 aa4.7□□□□□ -1.66
SDCBP-213ENST00000630925 SNRPAP09012 282 aaKnown RBP4.7□□□□□ -1.66
SDCBP-213ENST00000630925 CALM1P0DP23 149 aa4.7□□□□□ -1.66
SDCBP-213ENST00000630925 CALM2P0DP24 149 aa4.7□□□□□ -1.66
SDCBP-213ENST00000630925 CALM3P0DP25 149 aa4.7□□□□□ -1.66
SDCBP-213ENST00000630925 CEBPBP17676 345 aa4.7□□□□□ -1.66
SDCBP-213ENST00000630925 TGM2P21980 687 aa4.7□□□□□ -1.66
SDCBP-213ENST00000630925 SLC6A2P23975 617 aa4.7□□□□□ -1.66
SDCBP-213ENST00000630925 GIFP27352 417 aa4.7□□□□□ -1.66
SDCBP-213ENST00000630925 DCTDP32321 178 aa4.7□□□□□ -1.66
SDCBP-213ENST00000630925 THBS2P35442 1172 aa4.7□□□□□ -1.66
SDCBP-213ENST00000630925 MAGEB1P43366 347 aa4.7□□□□□ -1.66
SDCBP-213ENST00000630925 PTPN9P43378 593 aa4.7□□□□□ -1.66
SDCBP-213ENST00000630925 MTNR1AP48039 350 aa4.7□□□□□ -1.66
SDCBP-213ENST00000630925 ANTXR2P58335 489 aa4.7□□□□□ -1.66
SDCBP-213ENST00000630925 PRPS1P60891 318 aa4.7□□□□□ -1.66
SDCBP-213ENST00000630925 CBX1P83916 185 aa4.7□□□□□ -1.66
SDCBP-213ENST00000630925 MEF2AQ02078 507 aaPredicted RBP4.7□□□□□ -1.66
SDCBP-213ENST00000630925 SHBQ15464 509 aa4.7□□□□□ -1.66
SDCBP-213ENST00000630925 AP5B1Q2VPB7 878 aa4.7□□□□□ -1.66
SDCBP-213ENST00000630925 CRB2Q5IJ48 1285 aa4.7□□□□□ -1.66
SDCBP-213ENST00000630925 CXorf66Q5JRM2 361 aaPredicted RBP4.7□□□□□ -1.66
SDCBP-213ENST00000630925 PDZK1Q5T2W1 519 aa4.7□□□□□ -1.66
SDCBP-213ENST00000630925 PHF19Q5T6S3 580 aa4.7□□□□□ -1.66
SDCBP-213ENST00000630925 CCDC18Q5T9S5 1454 aa4.7□□□□□ -1.66
SDCBP-213ENST00000630925 STEAP3Q658P3 488 aa4.7□□□□□ -1.66
SDCBP-213ENST00000630925 NADSYN1Q6IA69 706 aa4.7□□□□□ -1.66
SDCBP-213ENST00000630925 TEX38Q6PEX7 206 aa4.7□□□□□ -1.66
SDCBP-213ENST00000630925 SLC30A10Q6XR72 485 aa4.7□□□□□ -1.66
SDCBP-213ENST00000630925 UTS2BQ765I0 119 aa4.7□□□□□ -1.66
SDCBP-213ENST00000630925 FAM122BQ7Z309 247 aa4.7□□□□□ -1.66
SDCBP-213ENST00000630925 ERASQ7Z444 233 aa4.7□□□□□ -1.66
SDCBP-213ENST00000630925 LIMS2Q7Z4I7 341 aa4.7□□□□□ -1.66
SDCBP-213ENST00000630925 SPRED1Q7Z699 444 aa4.7□□□□□ -1.66
SDCBP-213ENST00000630925 CYP4Z1Q86W10 505 aa4.7□□□□□ -1.66
SDCBP-213ENST00000630925 CNGA4Q8IV77 575 aa4.7□□□□□ -1.66
SDCBP-213ENST00000630925 LMTK2Q8IWU2 1503 aa4.7□□□□□ -1.66
SDCBP-213ENST00000630925 CERS5Q8N5B7 392 aa4.7□□□□□ -1.66
SDCBP-213ENST00000630925 GPR161Q8N6U8 529 aaKnown RBP4.7□□□□□ -1.66
SDCBP-213ENST00000630925 TBC1D15Q8TC07 691 aa4.7□□□□□ -1.66
SDCBP-213ENST00000630925 NSMAFQ92636 917 aa4.7□□□□□ -1.66
SDCBP-213ENST00000630925 RIT1Q92963 219 aa4.7□□□□□ -1.66
SDCBP-213ENST00000630925 FAM46BQ96A09 425 aa4.7□□□□□ -1.66
SDCBP-213ENST00000630925 DUS3LQ96G46 650 aaKnown RBP4.7□□□□□ -1.66
SDCBP-213ENST00000630925 DIRC2Q96SL1 478 aa4.7□□□□□ -1.66
SDCBP-213ENST00000630925 SPAG8Q99932 426 aaPredicted RBP4.7□□□□□ -1.66
SDCBP-213ENST00000630925 TMEM43Q9BTV4 400 aa4.7□□□□□ -1.66
SDCBP-213ENST00000630925 SLC46A2Q9BY10 475 aa4.7□□□□□ -1.66
SDCBP-213ENST00000630925 NLNQ9BYT8 704 aa4.7□□□□□ -1.66
SDCBP-213ENST00000630925 PITPNM2Q9BZ72 1349 aa4.7□□□□□ -1.66
SDCBP-213ENST00000630925 SEMA4CQ9C0C4 833 aa4.7□□□□□ -1.66
SDCBP-213ENST00000630925 PEAK1Q9H792 1746 aa4.7□□□□□ -1.66
SDCBP-213ENST00000630925 DMAP1Q9NPF5 467 aaPredicted RBP4.7□□□□□ -1.66
SDCBP-213ENST00000630925 YAE1D1Q9NRH1 226 aa4.7□□□□□ -1.66
SDCBP-213ENST00000630925 RDH8Q9NYR8 311 aa4.7□□□□□ -1.66
SDCBP-213ENST00000630925 NXF1Q9UBU9 619 aaKnown RBP4.7□□□□□ -1.66
SDCBP-213ENST00000630925 POLLQ9UGP5 575 aa4.7□□□□□ -1.66
SDCBP-213ENST00000630925 SCML1Q9UN30 329 aa4.7□□□□□ -1.66
SDCBP-213ENST00000630925 FOXA2Q9Y261 457 aaPredicted RBP4.7□□□□□ -1.66
SDCBP-213ENST00000630925 TMEM247A6NEH6 219 aa4.69□□□□□ -1.66
SDCBP-213ENST00000630925 WASH4PA8MWX3 477 aa4.69□□□□□ -1.66
SDCBP-213ENST00000630925 CENPBD1B2RD01 187 aa4.69□□□□□ -1.66
SDCBP-213ENST00000630925 J3QL48 77 aa4.69□□□□□ -1.66
SDCBP-213ENST00000630925 GATCO43716 136 aaKnown RBP4.69□□□□□ -1.66
SDCBP-213ENST00000630925 PPP1R11O60927 126 aaPredicted RBP4.69□□□□□ -1.66
SDCBP-213ENST00000630925 ATP2C2O75185 946 aa4.69□□□□□ -1.66
SDCBP-213ENST00000630925 MOCS3O95396 460 aa4.69□□□□□ -1.66
SDCBP-213ENST00000630925 GAS8O95995 478 aa4.69□□□□□ -1.66
SDCBP-213ENST00000630925 MT-ND1P03886 318 aa4.69□□□□□ -1.66
SDCBP-213ENST00000630925 MT-ND2P03891 347 aa4.69□□□□□ -1.66
SDCBP-213ENST00000630925 HMGN1P05114 100 aa4.69□□□□□ -1.66
SDCBP-213ENST00000630925 STSP08842 583 aa4.69□□□□□ -1.66
SDCBP-213ENST00000630925 ARSAP15289 507 aa4.69□□□□□ -1.66
SDCBP-213ENST00000630925 ITGB5P18084 799 aa4.69□□□□□ -1.66
SDCBP-213ENST00000630925 ATF6P18850 670 aa4.69□□□□□ -1.66
SDCBP-213ENST00000630925 HNF1AP20823 631 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms